RNA–Protein interactions for RNA: YMR229C

RRP5, Transcript of RNA binding protein involved in synthesis of both 18S and 5.8S rRNAs, yeast

Gene RRP5, Length 5,190 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RRP5	YMR229C	NUP170	P38181	1502 aa		3.9	□□□□□ -1.78
RRP5	YMR229C	SPB4	P25808	606 aa	Predicted RBP	3.9	□□□□□ -1.79
RRP5	YMR229C	LEU2	P04173	364 aa	Predicted RBP	3.9	□□□□□ -1.79
RRP5	YMR229C	MTR4	P47047	1073 aa	Known RBP	3.9	□□□□□ -1.79
RRP5	YMR229C	POL1	P13382	1468 aa		3.9	□□□□□ -1.79
RRP5	YMR229C	ITT1	Q04638	464 aa		3.9	□□□□□ -1.79
RRP5	YMR229C	DNF1	P32660	1571 aa		3.89	□□□□□ -1.79
RRP5	YMR229C	RFC1	P38630	861 aa	Known RBP	3.89	□□□□□ -1.79
RRP5	YMR229C	EDE1	P34216	1381 aa		3.89	□□□□□ -1.79
RRP5	YMR229C	SSA2	P10592	639 aa	Known RBP	3.89	□□□□□ -1.79
RRP5	YMR229C	IPL1	P38991	367 aa		3.89	□□□□□ -1.79
RRP5	YMR229C	AIM7	Q12156	149 aa		3.89	□□□□□ -1.79
RRP5	YMR229C	ESP1	Q03018	1630 aa		3.89	□□□□□ -1.79
RRP5	YMR229C	ESC1	Q03661	1658 aa	Known RBP	3.89	□□□□□ -1.79
RRP5	YMR229C	AOS1	Q06624	347 aa		3.89	□□□□□ -1.79
RRP5	YMR229C	IMH1	Q06704	911 aa	Known RBP	3.89	□□□□□ -1.79
RRP5	YMR229C	TCB2	P48231	1178 aa		3.88	□□□□□ -1.79
RRP5	YMR229C	RAD9	P14737	1309 aa		3.88	□□□□□ -1.79
RRP5	YMR229C	RTG3	P38165	486 aa		3.88	□□□□□ -1.79
RRP5	YMR229C	DIB1	Q06819	143 aa	Predicted RBP	3.88	□□□□□ -1.79
RRP5	YMR229C	FPR4	Q06205	392 aa	Predicted RBP	3.87	□□□□□ -1.79
RRP5	YMR229C	DPS1	P04802	557 aa	Known RBP	3.87	□□□□□ -1.79
RRP5	YMR229C	PRP45	P28004	379 aa	Predicted RBP	3.87	□□□□□ -1.79
RRP5	YMR229C	YAF9	P53930	226 aa		3.87	□□□□□ -1.79
RRP5	YMR229C	ETT1	Q08421	412 aa	Known RBP	3.87	□□□□□ -1.79
RRP5	YMR229C	BUG1	Q12191	341 aa		3.87	□□□□□ -1.79
RRP5	YMR229C	SLD2	P34252	453 aa		3.87	□□□□□ -1.79
RRP5	YMR229C	RIX1	P38883	763 aa	Predicted RBP	3.87	□□□□□ -1.79
RRP5	YMR229C	SNF7	P39929	240 aa	Known RBP	3.87	□□□□□ -1.79
RRP5	YMR229C	NOP53	Q12080	455 aa	Known RBP	3.87	□□□□□ -1.79
RRP5	YMR229C	RPO31	P04051	1460 aa		3.87	□□□□□ -1.79
RRP5	YMR229C	BIK1	P11709	440 aa		3.86	□□□□□ -1.79
RRP5	YMR229C	RSM25	P40496	264 aa		3.86	□□□□□ -1.79
RRP5	YMR229C	SNU66	Q12420	587 aa	Predicted RBP	3.86	□□□□□ -1.79
RRP5	YMR229C	VAS1	P07806	1104 aa	Known RBP	3.86	□□□□□ -1.79
RRP5	YMR229C	YBP2	P53169	641 aa		3.86	□□□□□ -1.79
RRP5	YMR229C	IOC4	Q04213	475 aa		3.86	□□□□□ -1.79
RRP5	YMR229C	KEX1	P09620	729 aa		3.86	□□□□□ -1.79
RRP5	YMR229C	ESF1	Q06344	628 aa	Known RBP	3.86	□□□□□ -1.79
RRP5	YMR229C	RIX7	Q07844	837 aa	Known RBP	3.86	□□□□□ -1.79
RRP5	YMR229C	RRI2	Q12348	645 aa		3.86	□□□□□ -1.79
RRP5	YMR229C	CTF4	Q01454	927 aa		3.85	□□□□□ -1.79
RRP5	YMR229C	ISW2	Q08773	1120 aa		3.85	□□□□□ -1.79
RRP5	YMR229C	PWP2	P25635	923 aa	Known RBP	3.85	□□□□□ -1.79
RRP5	YMR229C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	3.85	□□□□□ -1.79	not detected
RRP5	YMR229C	UBX2	Q04228	584 aa		3.85	□□□□□ -1.79
RRP5	YMR229C	CBF5	P33322	483 aa	Known RBP RIP-Chip data	3.85	□□□□□ -1.79	not detected
RRP5	YMR229C	YNG2	P38806	282 aa	Known RBP	3.85	□□□□□ -1.79
RRP5	YMR229C	OSW7	P43611	510 aa		3.85	□□□□□ -1.79
RRP5	YMR229C	CAB1	Q04430	367 aa		3.84	□□□□□ -1.79
RRP5	YMR229C	PSF3	Q12146	194 aa		3.84	□□□□□ -1.79
RRP5	YMR229C	GIN4	Q12263	1142 aa		3.84	□□□□□ -1.79
RRP5	YMR229C	SFI1	Q12369	946 aa		3.84	□□□□□ -1.79
RRP5	YMR229C	RPS0B	P46654	252 aa	Known RBP	3.84	□□□□□ -1.79
RRP5	YMR229C	PRP5	P21372	849 aa	Predicted RBP	3.84	□□□□□ -1.79
RRP5	YMR229C	CLB1	P24868	471 aa		3.84	□□□□□ -1.79
RRP5	YMR229C	RMT2	Q03305	412 aa		3.84	□□□□□ -1.79
RRP5	YMR229C	VPS60	Q03390	229 aa		3.83	□□□□□ -1.8
RRP5	YMR229C	GAS4	Q08271	471 aa		3.83	□□□□□ -1.8
RRP5	YMR229C	PSK1	P31374	1356 aa		3.83	□□□□□ -1.8
RRP5	YMR229C	HSP104	P31539	908 aa	Known RBP	3.83	□□□□□ -1.8
RRP5	YMR229C	ALD4	P46367	519 aa	Known RBP	3.83	□□□□□ -1.8
RRP5	YMR229C	SNQ2	P32568	1501 aa	Known RBP	3.83	□□□□□ -1.8
RRP5	YMR229C	SES1	P07284	462 aa	Known RBP	3.83	□□□□□ -1.8
RRP5	YMR229C	RNR2	P09938	399 aa	Known RBP	3.83	□□□□□ -1.8
RRP5	YMR229C	SRS2	P12954	1174 aa		3.83	□□□□□ -1.8
RRP5	YMR229C	GRX1	P25373	110 aa	Known RBP	3.83	□□□□□ -1.8
RRP5	YMR229C	TCD1	P38756	429 aa		3.83	□□□□□ -1.8
RRP5	YMR229C	YNR029C	P53729	429 aa	Known RBP	3.83	□□□□□ -1.8
RRP5	YMR229C	MAM1	P40065	302 aa		3.83	□□□□□ -1.8
RRP5	YMR229C	SNU71	P53207	620 aa	Known RBP	3.83	□□□□□ -1.8
RRP5	YMR229C	LCD1	Q04377	747 aa		3.83	□□□□□ -1.8
RRP5	YMR229C	RAD50	P12753	1312 aa		3.82	□□□□□ -1.8
RRP5	YMR229C	ROX1	P25042	368 aa		3.82	□□□□□ -1.8
RRP5	YMR229C	RSC1	P53236	928 aa		3.82	□□□□□ -1.8
RRP5	YMR229C	ZDS1	P50111	915 aa	Known RBP	3.82	□□□□□ -1.8
RRP5	YMR229C	SGD1	Q06132	899 aa		3.82	□□□□□ -1.8
RRP5	YMR229C	SSP2	Q08646	371 aa		3.82	□□□□□ -1.8
RRP5	YMR229C	VTH1	P40438	1549 aa		3.82	□□□□□ -1.8
RRP5	YMR229C	VTH2	P40890	1549 aa		3.82	□□□□□ -1.8
RRP5	YMR229C	SMC1	P32908	1225 aa		3.82	□□□□□ -1.8
RRP5	YMR229C	RPN1	P38764	993 aa	Known RBP	3.82	□□□□□ -1.8
RRP5	YMR229C	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	3.82	□□□□□ -1.8	not detected
RRP5	YMR229C	DOS2	P54858	310 aa		3.82	□□□□□ -1.8
RRP5	YMR229C	RMD1	Q03441	430 aa		3.82	□□□□□ -1.8
RRP5	YMR229C	NBL1	Q3E7Y6	73 aa		3.82	□□□□□ -1.8
RRP5	YMR229C	PCT1	P13259	424 aa		3.82	□□□□□ -1.8
RRP5	YMR229C	RAD26	P40352	1085 aa		3.82	□□□□□ -1.8
RRP5	YMR229C	MGA2	P40578	1113 aa		3.82	□□□□□ -1.8
RRP5	YMR229C	UGA3	P26370	528 aa		3.81	□□□□□ -1.8
RRP5	YMR229C	DEP1	P31385	405 aa		3.81	□□□□□ -1.8
RRP5	YMR229C	YKL133C	P36066	463 aa		3.81	□□□□□ -1.8
RRP5	YMR229C	CAJ1	P39101	391 aa		3.81	□□□□□ -1.8
RRP5	YMR229C	ENT3	P47160	408 aa		3.81	□□□□□ -1.8
RRP5	YMR229C	KRE33	P53914	1056 aa	Known RBP	3.81	□□□□□ -1.8
RRP5	YMR229C	CDC25	P04821	1589 aa		3.81	□□□□□ -1.8
RRP5	YMR229C	THI12	P42883	340 aa		3.81	□□□□□ -1.8
RRP5	YMR229C	THI5	P43534	340 aa		3.81	□□□□□ -1.8
RRP5	YMR229C	THI11	P47183	340 aa		3.81	□□□□□ -1.8
RRP5	YMR229C	THI13	Q07748	340 aa		3.81	□□□□□ -1.8

Retrieved 100 of 5,963 RNA–protein pairs in 272.5 ms