RNA–Protein interactions for RNA: YMR162C

DNF3, Transcript of Trans-golgi network aminophospholipid translocase (flippase), yeastyeast

Gene DNF3, Length 4,971 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DNF3YMR162C YBT1P32386 1661 aa2.24□□□□□ -2.05
DNF3YMR162C YEF3P16521 1044 aaKnown RBP2.23□□□□□ -2.05
DNF3YMR162C YFR016CP43597 1233 aaKnown RBP2.23□□□□□ -2.05
DNF3YMR162C SEN54Q02825 467 aaPredicted RBP2.23□□□□□ -2.05
DNF3YMR162C IMH1Q06704 911 aaKnown RBP2.23□□□□□ -2.05
DNF3YMR162C ZDS2P54786 942 aa2.23□□□□□ -2.05
DNF3YMR162C MEC3Q02574 474 aa2.23□□□□□ -2.05
DNF3YMR162C AVT3P36062 692 aa2.22□□□□□ -2.05
DNF3YMR162C YAF9P53930 226 aa2.22□□□□□ -2.05
DNF3YMR162C GEA1P47102 1408 aaPredicted RBP2.22□□□□□ -2.05
DNF3YMR162C NUP188P52593 1655 aaKnown RBP2.22□□□□□ -2.05
DNF3YMR162C SEC7P11075 2009 aaKnown RBP2.22□□□□□ -2.05
DNF3YMR162C TAF5P38129 798 aa2.22□□□□□ -2.05
DNF3YMR162C ENP2P48234 707 aaKnown RBP2.22□□□□□ -2.05
DNF3YMR162C RTF1P53064 558 aa2.22□□□□□ -2.05
DNF3YMR162C BRE1Q07457 700 aaKnown RBP2.22□□□□□ -2.05
DNF3YMR162C BUD21Q08492 214 aaPredicted RBP2.21□□□□□ -2.05
DNF3YMR162C BUD31P25337 157 aaPredicted RBP2.21□□□□□ -2.06
DNF3YMR162C RSC30P38781 883 aa2.21□□□□□ -2.06
DNF3YMR162C IPL1P38991 367 aa2.21□□□□□ -2.06
DNF3YMR162C FUN12P39730 1002 aaKnown RBP2.21□□□□□ -2.06
DNF3YMR162C PTP3P40048 928 aa2.21□□□□□ -2.06
DNF3YMR162C USO1P25386 1790 aa2.21□□□□□ -2.06
DNF3YMR162C HUL5P53119 910 aa2.21□□□□□ -2.06
DNF3YMR162C SRB8P25648 1427 aa2.2□□□□□ -2.06
DNF3YMR162C RPS9AO13516 197 aaKnown RBP2.2□□□□□ -2.06
DNF3YMR162C MDG1P53885 366 aa2.2□□□□□ -2.06
DNF3YMR162C PEX21P50091 288 aa2.2□□□□□ -2.06
DNF3YMR162C SEC20P28791 383 aa2.19□□□□□ -2.06
DNF3YMR162C CKB1P43639 278 aa2.19□□□□□ -2.06
DNF3YMR162C ROM2P51862 1356 aaKnown RBP2.19□□□□□ -2.06
DNF3YMR162C DAL5P15365 543 aa2.19□□□□□ -2.06
DNF3YMR162C TAF8Q03750 510 aa2.19□□□□□ -2.06
DNF3YMR162C YRF1-2P40105 1681 aa2.19□□□□□ -2.06
DNF3YMR162C HPC2Q01448 625 aa2.18□□□□□ -2.06
DNF3YMR162C PDR5P33302 1511 aaKnown RBP2.18□□□□□ -2.06
DNF3YMR162C YSP2Q06681 1438 aa2.18□□□□□ -2.06
DNF3YMR162C SSA2P10592 639 aaKnown RBP2.18□□□□□ -2.06
DNF3YMR162C SER1P33330 395 aaKnown RBP2.18□□□□□ -2.06
DNF3YMR162C YBL086CP38177 466 aa2.17□□□□□ -2.06
DNF3YMR162C CHZ1P40019 153 aaPredicted RBP2.17□□□□□ -2.06
DNF3YMR162C ENT1Q12518 454 aa2.17□□□□□ -2.06
DNF3YMR162C AIM7Q12156 149 aa2.17□□□□□ -2.06
DNF3YMR162C EAR1Q03212 550 aa2.17□□□□□ -2.06
DNF3YMR162C ARP8Q12386 881 aaKnown RBP RIP-Chip data2.17□□□□□ -2.06not detected
DNF3YMR162C TPM1P17536 199 aaKnown RBP2.16□□□□□ -2.06
DNF3YMR162C DIB1Q06819 143 aaPredicted RBP2.16□□□□□ -2.06
DNF3YMR162C REB1P21538 810 aa2.16□□□□□ -2.06
DNF3YMR162C IES2P40154 320 aa2.16□□□□□ -2.06
DNF3YMR162C MCM6P53091 1017 aaKnown RBP2.16□□□□□ -2.06
DNF3YMR162C NOP8Q08287 484 aaPredicted RBP2.16□□□□□ -2.06
DNF3YMR162C TPD3P31383 635 aa2.16□□□□□ -2.06
DNF3YMR162C IRC3Q06683 689 aa2.16□□□□□ -2.06
DNF3YMR162C YNR029CP53729 429 aaKnown RBP2.15□□□□□ -2.06
DNF3YMR162C SDH5Q08230 162 aa2.15□□□□□ -2.06
DNF3YMR162C RGD1P38339 666 aa2.15□□□□□ -2.07
DNF3YMR162C YLR419WQ06698 1435 aaKnown RBP2.15□□□□□ -2.07
DNF3YMR162C BDF1P35817 686 aa2.15□□□□□ -2.07
DNF3YMR162C RIA1P53893 1110 aa2.15□□□□□ -2.07
DNF3YMR162C YNL035CP53962 389 aaKnown RBP2.15□□□□□ -2.07
DNF3YMR162C UBX2Q04228 584 aa2.15□□□□□ -2.07
DNF3YMR162C RIX7Q07844 837 aaKnown RBP2.15□□□□□ -2.07
DNF3YMR162C RSF2P46974 1380 aa2.14□□□□□ -2.07
DNF3YMR162C APP1P53933 587 aa2.14□□□□□ -2.07
DNF3YMR162C ATG13Q06628 738 aa2.14□□□□□ -2.07
DNF3YMR162C KGD2P19262 463 aaPredicted RBP2.14□□□□□ -2.07
DNF3YMR162C BUD2P33314 1104 aa2.14□□□□□ -2.07
DNF3YMR162C YKR018CP36114 725 aa2.14□□□□□ -2.07
DNF3YMR162C BUG1Q12191 341 aa2.13□□□□□ -2.07
DNF3YMR162C AOS1Q06624 347 aa2.13□□□□□ -2.07
DNF3YMR162C PSF3Q12146 194 aa2.13□□□□□ -2.07
DNF3YMR162C RAD9P14737 1309 aa2.13□□□□□ -2.07
DNF3YMR162C KEX1P09620 729 aa2.13□□□□□ -2.07
DNF3YMR162C BSD2P38356 321 aa2.13□□□□□ -2.07
DNF3YMR162C AAD16Q02895 342 aa2.13□□□□□ -2.07
DNF3YMR162C CRF1Q04930 467 aa2.13□□□□□ -2.07
DNF3YMR162C SVF1Q05515 481 aa2.13□□□□□ -2.07
DNF3YMR162C FPR3P38911 411 aaKnown RBP2.13□□□□□ -2.07
DNF3YMR162C FAA3P39002 694 aa2.13□□□□□ -2.07
DNF3YMR162C FPR4Q06205 392 aaPredicted RBP2.13□□□□□ -2.07
DNF3YMR162C GAL2P13181 574 aa2.12□□□□□ -2.07
DNF3YMR162C PSK1P31374 1356 aa2.12□□□□□ -2.07
DNF3YMR162C GCN2P15442 1659 aa2.12□□□□□ -2.07
DNF3YMR162C CTT1P06115 562 aa2.12□□□□□ -2.07
DNF3YMR162C KAR2P16474 682 aaKnown RBP2.12□□□□□ -2.07
DNF3YMR162C GLC3P32775 704 aa2.12□□□□□ -2.07
DNF3YMR162C MSC7P38694 644 aa2.12□□□□□ -2.07
DNF3YMR162C GRX6Q12438 231 aa2.12□□□□□ -2.07
DNF3YMR162C PES4P39684 611 aa2.12□□□□□ -2.07
DNF3YMR162C TY1B-AO13527 1196 aaKnown RBP2.11□□□□□ -2.07
DNF3YMR162C YFL040WP43562 540 aa2.11□□□□□ -2.07
DNF3YMR162C SRF1Q12516 437 aa2.11□□□□□ -2.07
DNF3YMR162C PRP5P21372 849 aaPredicted RBP2.11□□□□□ -2.07
DNF3YMR162C KRI1P42846 591 aaKnown RBP2.11□□□□□ -2.07
DNF3YMR162C YKR023WP36119 530 aaKnown RBP2.11□□□□□ -2.07
DNF3YMR162C IOC3P43596 787 aa2.11□□□□□ -2.07
DNF3YMR162C YLL066CQ99208 1374 aa2.11□□□□□ -2.07
DNF3YMR162C ALD4P46367 519 aaKnown RBP2.11□□□□□ -2.07
DNF3YMR162C ESL2P36168 1195 aa2.1□□□□□ -2.07
DNF3YMR162C FET4P40988 552 aa2.1□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 30.5 ms