RNA–Protein interactions for RNA: YML013W

UBX2, Transcript of Bridging factor involved in ER-associated protein degradation (ERAD), yeastyeast

Gene UBX2, Length 1,755 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBX2YML013W YFR016CP43597 1233 aaKnown RBP6.87□□□□□ -1.31
UBX2YML013W MDS3P53094 1487 aa6.86□□□□□ -1.31
UBX2YML013W PPG1P32838 368 aa6.86□□□□□ -1.31
UBX2YML013W TSR4P25040 408 aa6.85□□□□□ -1.31
UBX2YML013W YNL108CP53929 270 aa6.85□□□□□ -1.31
UBX2YML013W YOL098CQ12496 1037 aa6.85□□□□□ -1.31
UBX2YML013W KTR1P27810 393 aaKnown RBP6.85□□□□□ -1.31
UBX2YML013W PRS1P32895 427 aaKnown RBP6.85□□□□□ -1.31
UBX2YML013W RRP15Q06511 250 aaPredicted RBP6.85□□□□□ -1.31
UBX2YML013W YBL113CQ7M4S9 792 aa6.85□□□□□ -1.31
UBX2YML013W TAF2P23255 1407 aa6.84□□□□□ -1.31
UBX2YML013W SIN3P22579 1536 aa6.84□□□□□ -1.31
UBX2YML013W ATG2P53855 1592 aa6.83□□□□□ -1.32
UBX2YML013W MIF2P35201 549 aa6.83□□□□□ -1.32
UBX2YML013W FPR3P38911 411 aaKnown RBP6.83□□□□□ -1.32
UBX2YML013W POL32P47110 350 aa6.83□□□□□ -1.32
UBX2YML013W MSC6Q08818 692 aaKnown RBP6.83□□□□□ -1.32
UBX2YML013W IKI3Q06706 1349 aaKnown RBP6.83□□□□□ -1.32
UBX2YML013W ATE1P16639 503 aa6.82□□□□□ -1.32
UBX2YML013W PEP1P32319 1579 aa6.82□□□□□ -1.32
UBX2YML013W IME2P32581 645 aa6.82□□□□□ -1.32
UBX2YML013W ZDS1P50111 915 aaKnown RBP6.82□□□□□ -1.32
UBX2YML013W MAK16P10962 306 aaPredicted RBP6.81□□□□□ -1.32
UBX2YML013W RPS0BP46654 252 aaKnown RBP6.81□□□□□ -1.32
UBX2YML013W TYW1Q08960 810 aaKnown RBP6.81□□□□□ -1.32
UBX2YML013W BCH2P36122 765 aa6.8□□□□□ -1.32
UBX2YML013W EDS1P38073 919 aa6.8□□□□□ -1.32
UBX2YML013W JIP5Q06214 492 aaPredicted RBP6.8□□□□□ -1.32
UBX2YML013W SSK2P53599 1579 aa6.8□□□□□ -1.32
UBX2YML013W ERP5P38819 212 aa6.8□□□□□ -1.32
UBX2YML013W TFG1P41895 735 aaPredicted RBP6.8□□□□□ -1.32
UBX2YML013W PSE1P32337 1089 aaKnown RBP6.79□□□□□ -1.32
UBX2YML013W EPS1P40557 701 aa6.78□□□□□ -1.32
UBX2YML013W OYE2Q03558 400 aaKnown RBP6.78□□□□□ -1.32
UBX2YML013W MAG2Q06436 670 aaKnown RBP6.78□□□□□ -1.32
UBX2YML013W ESP1Q03018 1630 aa6.77□□□□□ -1.32
UBX2YML013W MYO2P19524 1574 aaKnown RBP6.77□□□□□ -1.32
UBX2YML013W QCR6P00127 147 aa6.77□□□□□ -1.33
UBX2YML013W ENO1P00924 437 aaKnown RBP6.77□□□□□ -1.33
UBX2YML013W SRP40P32583 406 aaPredicted RBP6.77□□□□□ -1.33
UBX2YML013W TGL4P36165 910 aa6.77□□□□□ -1.33
UBX2YML013W VPS29P38759 282 aa6.77□□□□□ -1.33
UBX2YML013W EAF7P53911 425 aaKnown RBP6.77□□□□□ -1.33
UBX2YML013W YDR090CQ03193 310 aa6.77□□□□□ -1.33
UBX2YML013W SSB1P11484 613 aaKnown RBP6.77□□□□□ -1.33
UBX2YML013W SUP45P12385 437 aaKnown RBP6.77□□□□□ -1.33
UBX2YML013W CSE4P36012 229 aa6.77□□□□□ -1.33
UBX2YML013W PMC1P38929 1173 aaPredicted RBP6.77□□□□□ -1.33
UBX2YML013W SSB2P40150 613 aaKnown RBP6.77□□□□□ -1.33
UBX2YML013W SEC8P32855 1065 aa6.76□□□□□ -1.33
UBX2YML013W YHL050CP38721 697 aa6.76□□□□□ -1.33
UBX2YML013W YHR219WP38900 624 aa6.76□□□□□ -1.33
UBX2YML013W VHR2P40041 505 aa6.76□□□□□ -1.33
UBX2YML013W TPM2P40414 161 aa6.76□□□□□ -1.33
UBX2YML013W ALG12P53730 551 aa6.76□□□□□ -1.33
UBX2YML013W YEL077CQ3E7X8 1277 aa6.76□□□□□ -1.33
UBX2YML013W KRI1P42846 591 aaKnown RBP6.75□□□□□ -1.33
UBX2YML013W CIT2P08679 460 aa6.74□□□□□ -1.33
UBX2YML013W YKL091CP33324 310 aaKnown RBP6.74□□□□□ -1.33
UBX2YML013W TEA1P47988 759 aa6.74□□□□□ -1.33
UBX2YML013W THI12P42883 340 aa6.74□□□□□ -1.33
UBX2YML013W THI5P43534 340 aa6.74□□□□□ -1.33
UBX2YML013W THI11P47183 340 aa6.74□□□□□ -1.33
UBX2YML013W CWC22P53333 577 aaKnown RBP6.74□□□□□ -1.33
UBX2YML013W THI13Q07748 340 aa6.74□□□□□ -1.33
UBX2YML013W CFT1Q06632 1357 aaKnown RBP6.73□□□□□ -1.33
UBX2YML013W PDR10P51533 1564 aa6.73□□□□□ -1.33
UBX2YML013W ENO2P00925 437 aaKnown RBP6.73□□□□□ -1.33
UBX2YML013W MRX10Q05648 414 aa6.73□□□□□ -1.33
UBX2YML013W YOL057WQ08225 711 aa6.73□□□□□ -1.33
UBX2YML013W VAC8P39968 578 aa6.72□□□□□ -1.33
UBX2YML013W KIP3P53086 805 aaKnown RBP6.72□□□□□ -1.33
UBX2YML013W RAD59Q12223 238 aa6.72□□□□□ -1.33
UBX2YML013W WHI5Q12416 295 aa6.72□□□□□ -1.33
UBX2YML013W STB3Q12427 513 aa6.72□□□□□ -1.33
UBX2YML013W KIC1P38692 1080 aa6.72□□□□□ -1.33
UBX2YML013W PPX1P38698 397 aa6.72□□□□□ -1.33
UBX2YML013W POB3Q04636 552 aaKnown RBP6.72□□□□□ -1.33
UBX2YML013W KAR5Q04746 504 aa6.72□□□□□ -1.33
UBX2YML013W SSM4P40318 1319 aa6.71□□□□□ -1.34
UBX2YML013W OPY1P38271 328 aa6.71□□□□□ -1.34
UBX2YML013W IOC3P43596 787 aa6.71□□□□□ -1.34
UBX2YML013W GRS1P38088 690 aaKnown RBP6.7□□□□□ -1.34
UBX2YML013W TY4A-JP47023 414 aa6.7□□□□□ -1.34
UBX2YML013W FAP1P53971 965 aa6.7□□□□□ -1.34
UBX2YML013W ECM23Q02710 187 aa6.7□□□□□ -1.34
UBX2YML013W TRL1P09880 827 aaKnown RBP6.69□□□□□ -1.34
UBX2YML013W BDF1P35817 686 aa6.69□□□□□ -1.34
UBX2YML013W RTT106P40161 455 aa6.69□□□□□ -1.34
UBX2YML013W MDJ2P42834 146 aa6.69□□□□□ -1.34
UBX2YML013W UBP3Q01477 912 aaKnown RBP RIP-Chip data6.69□□□□□ -1.34not detected
UBX2YML013W PKH3Q03306 898 aaPredicted RBP6.69□□□□□ -1.34
UBX2YML013W RPC31P17890 251 aa6.69□□□□□ -1.34
UBX2YML013W GAL11P19659 1081 aa6.69□□□□□ -1.34
UBX2YML013W YDJ1P25491 409 aaKnown RBP6.69□□□□□ -1.34
UBX2YML013W PTC3P34221 468 aaKnown RBP6.69□□□□□ -1.34
UBX2YML013W MGE1P38523 228 aa6.69□□□□□ -1.34
UBX2YML013W AIM21P40563 679 aa6.69□□□□□ -1.34
UBX2YML013W ALD3P54114 506 aa6.69□□□□□ -1.34
UBX2YML013W BPT1P14772 1559 aa6.69□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 80.5 ms