RNA–Protein interactions for RNA: YLL016W

SDC25, Transcript of Non-essential Ras guanine nucleotide exchange factor (GEF), yeastyeast

Gene SDC25, Length 3,147 nt, Biotype pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDC25YLL016W TIF1P10081 395 aaKnown RBP3.54□□□□□ -1.84
SDC25YLL016W RRN6P32786 894 aa3.54□□□□□ -1.84
SDC25YLL016W TGL3P40308 642 aa3.54□□□□□ -1.84
SDC25YLL016W YBL036CP38197 257 aa3.54□□□□□ -1.84
SDC25YLL016W YRF1-1P0CX20 1796 aa3.53□□□□□ -1.84
SDC25YLL016W YRF1-5P0CX21 1796 aa3.53□□□□□ -1.84
SDC25YLL016W YRF1-8P0CX22 1796 aa3.53□□□□□ -1.84
SDC25YLL016W TY2B-BQ12491 1770 aa3.53□□□□□ -1.84
SDC25YLL016W TRM732Q03496 1420 aa3.53□□□□□ -1.84
SDC25YLL016W NOP53Q12080 455 aaKnown RBP3.53□□□□□ -1.84
SDC25YLL016W UBP14P38237 781 aaKnown RBP3.53□□□□□ -1.84
SDC25YLL016W RTG2P32608 588 aaKnown RBP3.53□□□□□ -1.85
SDC25YLL016W KIC1P38692 1080 aa3.53□□□□□ -1.85
SDC25YLL016W STS1P38637 319 aa3.52□□□□□ -1.85
SDC25YLL016W VHR2P40041 505 aa3.52□□□□□ -1.85
SDC25YLL016W HAT1Q12341 374 aa3.52□□□□□ -1.85
SDC25YLL016W HEM3P28789 327 aa3.52□□□□□ -1.85
SDC25YLL016W EDS1P38073 919 aa3.52□□□□□ -1.85
SDC25YLL016W SSF1P38789 453 aaPredicted RBP3.51□□□□□ -1.85
SDC25YLL016W MMS22Q06164 1454 aa3.51□□□□□ -1.85
SDC25YLL016W NTE1Q04958 1679 aa3.51□□□□□ -1.85
SDC25YLL016W SLX5P32828 619 aaKnown RBP3.51□□□□□ -1.85
SDC25YLL016W NST1P53935 1240 aa3.51□□□□□ -1.85
SDC25YLL016W NUP159P40477 1460 aa3.51□□□□□ -1.85
SDC25YLL016W PAM1P37304 830 aaKnown RBP3.5□□□□□ -1.85
SDC25YLL016W TY1B-DR3Q99231 1755 aa3.5□□□□□ -1.85
SDC25YLL016W SSN2P38931 1420 aa3.5□□□□□ -1.85
SDC25YLL016W TTI1P36097 1038 aa3.5□□□□□ -1.85
SDC25YLL016W TOP2P06786 1428 aaKnown RBP3.5□□□□□ -1.85
SDC25YLL016W BRN1P38170 754 aa3.5□□□□□ -1.85
SDC25YLL016W NUP170P38181 1502 aa3.49□□□□□ -1.85
SDC25YLL016W YNL108CP53929 270 aa3.49□□□□□ -1.85
SDC25YLL016W NOB1Q08444 459 aaKnown RBP3.49□□□□□ -1.85
SDC25YLL016W TYW1Q08960 810 aaKnown RBP3.49□□□□□ -1.85
SDC25YLL016W YMR1P47147 688 aaKnown RBP RIP-Chip data3.49□□□□□ -1.85not detected
SDC25YLL016W RPO21P04050 1733 aaKnown RBP3.49□□□□□ -1.85
SDC25YLL016W YTA7P40340 1379 aa3.48□□□□□ -1.85
SDC25YLL016W BIO2P32451 375 aa3.48□□□□□ -1.85
SDC25YLL016W PTC3P34221 468 aaKnown RBP3.48□□□□□ -1.85
SDC25YLL016W TEA1P47988 759 aa3.48□□□□□ -1.85
SDC25YLL016W DBP1P24784 617 aaKnown RBP3.48□□□□□ -1.85
SDC25YLL016W YML083CQ04526 418 aa3.48□□□□□ -1.85
SDC25YLL016W SPO14P36126 1683 aa3.47□□□□□ -1.85
SDC25YLL016W PSE1P32337 1089 aaKnown RBP3.47□□□□□ -1.85
SDC25YLL016W SEN54Q02825 467 aaPredicted RBP3.47□□□□□ -1.85
SDC25YLL016W TY1B-JR2P47100 1755 aaKnown RBP3.47□□□□□ -1.85
SDC25YLL016W TY1B-ER2Q03619 1755 aa3.47□□□□□ -1.85
SDC25YLL016W TY1B-MR1Q04214 1755 aa3.47□□□□□ -1.85
SDC25YLL016W TY1B-MR2Q04670 1755 aaKnown RBP3.47□□□□□ -1.85
SDC25YLL016W TY1B-LR1Q12088 1755 aaKnown RBP3.47□□□□□ -1.85
SDC25YLL016W TY1B-NL1Q12112 1755 aa3.47□□□□□ -1.85
SDC25YLL016W TY1B-GR1Q12141 1755 aa3.47□□□□□ -1.85
SDC25YLL016W TY1B-BLQ12490 1755 aa3.47□□□□□ -1.85
SDC25YLL016W KTR1P27810 393 aaKnown RBP3.46□□□□□ -1.85
SDC25YLL016W ASF1P32447 279 aa3.46□□□□□ -1.85
SDC25YLL016W YMR196WQ04336 1088 aa3.46□□□□□ -1.85
SDC25YLL016W DOP1Q03921 1698 aa3.46□□□□□ -1.86
SDC25YLL016W YDR090CQ03193 310 aa3.46□□□□□ -1.86
SDC25YLL016W TRM3Q07527 1436 aa3.45□□□□□ -1.86
SDC25YLL016W TOP1P04786 769 aa3.45□□□□□ -1.86
SDC25YLL016W RAD54P32863 898 aa3.45□□□□□ -1.86
SDC25YLL016W IPL1P38991 367 aa3.45□□□□□ -1.86
SDC25YLL016W STM1P39015 273 aaKnown RBP3.45□□□□□ -1.86
SDC25YLL016W PKH3Q03306 898 aaPredicted RBP3.45□□□□□ -1.86
SDC25YLL016W PUP1P25043 261 aa3.44□□□□□ -1.86
SDC25YLL016W ATH1P48016 1211 aa3.44□□□□□ -1.86
SDC25YLL016W SEC20P28791 383 aa3.43□□□□□ -1.86
SDC25YLL016W YLR326WQ06170 240 aaKnown RBP3.43□□□□□ -1.86
SDC25YLL016W RAD59Q12223 238 aa3.43□□□□□ -1.86
SDC25YLL016W SIS2P36024 562 aa3.43□□□□□ -1.86
SDC25YLL016W SPC42P36094 363 aa3.43□□□□□ -1.86
SDC25YLL016W SOL3P38858 249 aa3.43□□□□□ -1.86
SDC25YLL016W YBL113CQ7M4S9 792 aa3.43□□□□□ -1.86
SDC25YLL016W SPP41P38904 1435 aa3.42□□□□□ -1.86
SDC25YLL016W SMC4Q12267 1418 aa3.42□□□□□ -1.86
SDC25YLL016W ENO1P00924 437 aaKnown RBP3.42□□□□□ -1.86
SDC25YLL016W ARG8P18544 423 aa3.42□□□□□ -1.86
SDC25YLL016W YOR238WQ08634 303 aa3.42□□□□□ -1.86
SDC25YLL016W ULS1Q08562 1619 aa3.42□□□□□ -1.86
SDC25YLL016W CSE4P36012 229 aa3.42□□□□□ -1.86
SDC25YLL016W THI12P42883 340 aa3.42□□□□□ -1.86
SDC25YLL016W THI5P43534 340 aa3.42□□□□□ -1.86
SDC25YLL016W THI11P47183 340 aa3.42□□□□□ -1.86
SDC25YLL016W THI13Q07748 340 aa3.42□□□□□ -1.86
SDC25YLL016W SNT2P53127 1403 aa3.42□□□□□ -1.86
SDC25YLL016W ESS1P22696 170 aa3.41□□□□□ -1.86
SDC25YLL016W VTH1P40438 1549 aa3.41□□□□□ -1.86
SDC25YLL016W VTH2P40890 1549 aa3.41□□□□□ -1.86
SDC25YLL016W TGL4P36165 910 aa3.41□□□□□ -1.86
SDC25YLL016W KTR7P40504 517 aa3.41□□□□□ -1.86
SDC25YLL016W ALD4P46367 519 aaKnown RBP3.41□□□□□ -1.86
SDC25YLL016W ALD2P47771 506 aa3.41□□□□□ -1.86
SDC25YLL016W MMP1Q12372 583 aa3.41□□□□□ -1.86
SDC25YLL016W NNF1P47149 201 aa3.41□□□□□ -1.86
SDC25YLL016W FPR4Q06205 392 aaPredicted RBP3.41□□□□□ -1.86
SDC25YLL016W ENO2P00925 437 aaKnown RBP3.4□□□□□ -1.86
SDC25YLL016W YDJ1P25491 409 aaKnown RBP3.4□□□□□ -1.86
SDC25YLL016W OCA5P38738 679 aa3.4□□□□□ -1.86
SDC25YLL016W POL32P47110 350 aa3.4□□□□□ -1.86
SDC25YLL016W PIB1Q06651 286 aa3.4□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms