RNA–Protein interactions for RNA: YKL146W

AVT3, Transcript of Vacuolar transporter, yeastyeast

Gene AVT3, Length 2,079 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AVT3YKL146W PDS5Q04264 1277 aa6.84□□□□□ -1.31
AVT3YKL146W THI12P42883 340 aa6.83□□□□□ -1.32
AVT3YKL146W THI5P43534 340 aa6.83□□□□□ -1.32
AVT3YKL146W THI11P47183 340 aa6.83□□□□□ -1.32
AVT3YKL146W RCM1P53972 490 aa6.83□□□□□ -1.32
AVT3YKL146W THI13Q07748 340 aa6.83□□□□□ -1.32
AVT3YKL146W SPT7P35177 1332 aa6.81□□□□□ -1.32
AVT3YKL146W YFR006WP43590 535 aa6.8□□□□□ -1.32
AVT3YKL146W CPS1P27614 576 aa6.79□□□□□ -1.32
AVT3YKL146W PPH3P32345 308 aa6.79□□□□□ -1.32
AVT3YKL146W PSK1P31374 1356 aa6.79□□□□□ -1.32
AVT3YKL146W RTG3P38165 486 aa6.78□□□□□ -1.32
AVT3YKL146W PSD2P53037 1138 aaKnown RBP6.78□□□□□ -1.32
AVT3YKL146W FKH1P40466 484 aa6.78□□□□□ -1.32
AVT3YKL146W LEU3P08638 886 aa6.77□□□□□ -1.33
AVT3YKL146W LEU2P04173 364 aaPredicted RBP6.75□□□□□ -1.33
AVT3YKL146W ISW2Q08773 1120 aa6.75□□□□□ -1.33
AVT3YKL146W YML133CQ03099 1374 aa6.73□□□□□ -1.33
AVT3YKL146W YLL067CQ07888 1374 aa6.73□□□□□ -1.33
AVT3YKL146W YLL066CQ99208 1374 aa6.73□□□□□ -1.33
AVT3YKL146W ENP1P38333 483 aaKnown RBP6.73□□□□□ -1.33
AVT3YKL146W MTR4P47047 1073 aaKnown RBP6.73□□□□□ -1.33
AVT3YKL146W NST1P53935 1240 aa6.72□□□□□ -1.33
AVT3YKL146W TY4B-HP0C2J7 1802 aa6.71□□□□□ -1.34
AVT3YKL146W TY4B-JP47024 1803 aa6.71□□□□□ -1.34
AVT3YKL146W CSE4P36012 229 aa6.7□□□□□ -1.34
AVT3YKL146W ADE6P38972 1358 aaKnown RBP6.7□□□□□ -1.34
AVT3YKL146W PDI1P17967 522 aaKnown RBP6.69□□□□□ -1.34
AVT3YKL146W NSR1P27476 414 aaKnown RBP RIP-Chip data6.69□□□□□ -1.34not detected
AVT3YKL146W RPS24AP0CX31 135 aaKnown RBP6.69□□□□□ -1.34
AVT3YKL146W RPS24BP0CX32 135 aaKnown RBP6.69□□□□□ -1.34
AVT3YKL146W RTF1P53064 558 aa6.69□□□□□ -1.34
AVT3YKL146W PRP43P53131 767 aaKnown RBP6.68□□□□□ -1.34
AVT3YKL146W PTP3P40048 928 aa6.67□□□□□ -1.34
AVT3YKL146W YEF3P16521 1044 aaKnown RBP6.67□□□□□ -1.34
AVT3YKL146W TAP42Q04372 366 aa6.67□□□□□ -1.34
AVT3YKL146W TRK1P12685 1235 aa6.66□□□□□ -1.34
AVT3YKL146W KAR2P16474 682 aaKnown RBP6.66□□□□□ -1.34
AVT3YKL146W PRP45P28004 379 aaPredicted RBP6.65□□□□□ -1.35
AVT3YKL146W GRX4P32642 244 aa6.65□□□□□ -1.35
AVT3YKL146W HIM1Q06674 414 aa6.65□□□□□ -1.35
AVT3YKL146W GAS4Q08271 471 aa6.65□□□□□ -1.35
AVT3YKL146W RRP5Q05022 1729 aaKnown RBP6.64□□□□□ -1.35
AVT3YKL146W PRP5P21372 849 aaPredicted RBP6.64□□□□□ -1.35
AVT3YKL146W DPS1P04802 557 aaKnown RBP6.64□□□□□ -1.35
AVT3YKL146W RPG1P38249 964 aaKnown RBP6.63□□□□□ -1.35
AVT3YKL146W PAP2P53632 584 aaKnown RBP6.63□□□□□ -1.35
AVT3YKL146W AUS1Q08409 1394 aa6.63□□□□□ -1.35
AVT3YKL146W IOC4Q04213 475 aa6.61□□□□□ -1.35
AVT3YKL146W SNF2P22082 1703 aa6.6□□□□□ -1.35
AVT3YKL146W YIL177CP40434 1758 aa6.6□□□□□ -1.35
AVT3YKL146W YJL225CP40889 1758 aa6.6□□□□□ -1.35
AVT3YKL146W MSB3P48566 633 aaPredicted RBP6.59□□□□□ -1.35
AVT3YKL146W ENT1Q12518 454 aa6.59□□□□□ -1.35
AVT3YKL146W PRI1P10363 409 aa6.59□□□□□ -1.35
AVT3YKL146W REB1P21538 810 aa6.59□□□□□ -1.35
AVT3YKL146W SLM3Q12093 417 aa6.59□□□□□ -1.35
AVT3YKL146W YAH1Q12184 172 aaKnown RBP6.59□□□□□ -1.35
AVT3YKL146W YRF1-2P40105 1681 aa6.59□□□□□ -1.36
AVT3YKL146W FKS3Q04952 1785 aa6.59□□□□□ -1.36
AVT3YKL146W RPO41P13433 1351 aaKnown RBP6.58□□□□□ -1.36
AVT3YKL146W PRS1P32895 427 aaKnown RBP6.58□□□□□ -1.36
AVT3YKL146W RTR1P40084 226 aaPredicted RBP6.58□□□□□ -1.36
AVT3YKL146W APP1P53933 587 aa6.58□□□□□ -1.36
AVT3YKL146W TCB1Q12466 1186 aa6.58□□□□□ -1.36
AVT3YKL146W URB1P34241 1764 aaKnown RBP6.58□□□□□ -1.36
AVT3YKL146W RRP46P53256 223 aaPredicted RBP6.57□□□□□ -1.36
AVT3YKL146W YDL144CQ07589 356 aa6.57□□□□□ -1.36
AVT3YKL146W RPP0P05317 312 aaKnown RBP6.57□□□□□ -1.36
AVT3YKL146W RPL17AP05740 184 aaKnown RBP6.57□□□□□ -1.36
AVT3YKL146W BUB1P41695 1021 aaKnown RBP RIP-Chip data6.57□□□□□ -1.36not detected
AVT3YKL146W RPL17BP46990 184 aaKnown RBP6.57□□□□□ -1.36
AVT3YKL146W ENV9Q08651 330 aa6.56□□□□□ -1.36
AVT3YKL146W VPS27P40343 622 aaKnown RBP6.55□□□□□ -1.36
AVT3YKL146W MPP10P47083 593 aaKnown RBP6.55□□□□□ -1.36
AVT3YKL146W XKS1P42826 600 aa6.54□□□□□ -1.36
AVT3YKL146W APC1P53886 1748 aa6.54□□□□□ -1.36
AVT3YKL146W PRD1P25375 712 aa6.54□□□□□ -1.36
AVT3YKL146W CDC45Q08032 650 aa6.54□□□□□ -1.36
AVT3YKL146W AKL1P38080 1108 aaKnown RBP6.53□□□□□ -1.36
AVT3YKL146W DMA2P53924 522 aa6.53□□□□□ -1.36
AVT3YKL146W RSF2P46974 1380 aa6.53□□□□□ -1.36
AVT3YKL146W DSD1P53095 428 aa6.53□□□□□ -1.36
AVT3YKL146W IES2P40154 320 aa6.52□□□□□ -1.37
AVT3YKL146W YRF1-3P0CX14 1859 aa6.51□□□□□ -1.37
AVT3YKL146W YRF1-7P0CX15 1859 aa6.51□□□□□ -1.37
AVT3YKL146W YRF1-6P53819 1859 aa6.51□□□□□ -1.37
AVT3YKL146W IMH1Q06704 911 aaKnown RBP6.51□□□□□ -1.37
AVT3YKL146W HSP104P31539 908 aaKnown RBP6.51□□□□□ -1.37
AVT3YKL146W RCR1P38212 213 aa6.51□□□□□ -1.37
AVT3YKL146W FAP1P53971 965 aa6.51□□□□□ -1.37
AVT3YKL146W THI22Q06490 572 aa6.51□□□□□ -1.37
AVT3YKL146W SUI2P20459 304 aaKnown RBP6.5□□□□□ -1.37
AVT3YKL146W TPD3P31383 635 aa6.5□□□□□ -1.37
AVT3YKL146W SAP155P43612 1002 aa6.5□□□□□ -1.37
AVT3YKL146W RVB2Q12464 471 aaKnown RBP6.5□□□□□ -1.37
AVT3YKL146W YRF1-4O13559 1382 aa6.5□□□□□ -1.37
AVT3YKL146W CTF4Q01454 927 aa6.49□□□□□ -1.37
AVT3YKL146W SIR4P11978 1358 aa6.49□□□□□ -1.37
AVT3YKL146W NTH2P35172 780 aa6.48□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 32.3 ms