RNA–Protein interactions for RNA: YKL042W

SPC42, Transcript of Central plaque component of spindle pole body (SPB), yeastyeast

Gene SPC42, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC42YKL042W TFB4Q12004 338 aa9.2□□□□□ -0.94
SPC42YKL042W YEL077CQ3E7X8 1277 aa9.2□□□□□ -0.94
SPC42YKL042W GUA1P38625 525 aaKnown RBP9.19□□□□□ -0.94
SPC42YKL042W ISM1P48526 1002 aa9.19□□□□□ -0.94
SPC42YKL042W NUD1P32336 851 aa9.15□□□□□ -0.94
SPC42YKL042W ORC6P38826 435 aa9.13□□□□□ -0.95
SPC42YKL042W RGA1P39083 1007 aa9.13□□□□□ -0.95
SPC42YKL042W HPC2Q01448 625 aa9.11□□□□□ -0.95
SPC42YKL042W PSE1P32337 1089 aaKnown RBP9.1□□□□□ -0.95
SPC42YKL042W NPL4P33755 580 aa9.09□□□□□ -0.95
SPC42YKL042W ERG12P07277 443 aa9.08□□□□□ -0.96
SPC42YKL042W MVP1P40959 511 aaKnown RBP9.08□□□□□ -0.96
SPC42YKL042W GCD11P32481 527 aaKnown RBP9.07□□□□□ -0.96
SPC42YKL042W SEC2P17065 759 aa9.06□□□□□ -0.96
SPC42YKL042W TFB3Q03290 321 aa9.05□□□□□ -0.96
SPC42YKL042W TY1A-DR4O74302 440 aa9.04□□□□□ -0.96
SPC42YKL042W TY1A-HP0C2I4 478 aaKnown RBP9.04□□□□□ -0.96
SPC42YKL042W TY1A-AP0CX57 440 aa9.04□□□□□ -0.96
SPC42YKL042W TY1A-PR1P0CX58 440 aa9.04□□□□□ -0.96
SPC42YKL042W TY1A-ORP0CX59 440 aa9.04□□□□□ -0.96
SPC42YKL042W TY1A-PR2P0CX60 440 aa9.04□□□□□ -0.96
SPC42YKL042W TY1A-DR5P0CX65 440 aa9.04□□□□□ -0.96
SPC42YKL042W TY1A-ER2P0CX66 440 aa9.04□□□□□ -0.96
SPC42YKL042W TY1A-GR3P0CX67 440 aa9.04□□□□□ -0.96
SPC42YKL042W TY1A-LR1P0CX68 440 aa9.04□□□□□ -0.96
SPC42YKL042W TY1A-MR2P0CX69 440 aa9.04□□□□□ -0.96
SPC42YKL042W TY1A-JR2P47099 440 aa9.04□□□□□ -0.96
SPC42YKL042W TY1A-DR1Q03856 440 aa9.04□□□□□ -0.96
SPC42YKL042W TY1A-ML1Q04706 440 aaKnown RBP9.04□□□□□ -0.96
SPC42YKL042W TY1A-BRQ12217 440 aa9.04□□□□□ -0.96
SPC42YKL042W TY1A-NL2Q12470 440 aa9.04□□□□□ -0.96
SPC42YKL042W TY1A-GR2Q12485 440 aa9.04□□□□□ -0.96
SPC42YKL042W BRL1P38770 471 aa9.03□□□□□ -0.96
SPC42YKL042W CST6P40535 587 aa9.03□□□□□ -0.96
SPC42YKL042W YPR109WQ06104 294 aa9.03□□□□□ -0.96
SPC42YKL042W SSA2P10592 639 aaKnown RBP9.02□□□□□ -0.97
SPC42YKL042W RGR1P19263 1082 aa9.02□□□□□ -0.97
SPC42YKL042W CSN12P47130 423 aa9.01□□□□□ -0.97
SPC42YKL042W SPT16P32558 1035 aaKnown RBP9□□□□□ -0.97
SPC42YKL042W AIR1P40507 360 aaKnown RBP8.99□□□□□ -0.97
SPC42YKL042W TEA1P47988 759 aa8.99□□□□□ -0.97
SPC42YKL042W CLA4P48562 842 aa8.99□□□□□ -0.97
SPC42YKL042W LAM6Q08001 693 aa8.96□□□□□ -0.98
SPC42YKL042W PKC1P24583 1151 aa8.94□□□□□ -0.98
SPC42YKL042W RRN7P40992 514 aa8.94□□□□□ -0.98
SPC42YKL042W CLB5P30283 435 aa8.93□□□□□ -0.98
SPC42YKL042W FRK1Q03002 865 aaPredicted RBP8.93□□□□□ -0.98
SPC42YKL042W BRE2P43132 505 aa8.91□□□□□ -0.98
SPC42YKL042W ERF2Q06551 359 aa8.9□□□□□ -0.98
SPC42YKL042W PAT1P25644 796 aaKnown RBP8.89□□□□□ -0.99
SPC42YKL042W BDP1P46678 594 aa8.89□□□□□ -0.99
SPC42YKL042W GCR2Q01722 534 aa8.89□□□□□ -0.99
SPC42YKL042W KEX2P13134 814 aa8.88□□□□□ -0.99
SPC42YKL042W KTR1P27810 393 aaKnown RBP8.88□□□□□ -0.99
SPC42YKL042W YJL007CP47080 104 aa8.87□□□□□ -0.99
SPC42YKL042W TYW1Q08960 810 aaKnown RBP8.87□□□□□ -0.99
SPC42YKL042W CDC4P07834 779 aa8.85□□□□□ -0.99
SPC42YKL042W BIM1P40013 344 aa8.85□□□□□ -0.99
SPC42YKL042W NIS1P53939 407 aa8.85□□□□□ -0.99
SPC42YKL042W YMR196WQ04336 1088 aa8.85□□□□□ -0.99
SPC42YKL042W YPL062WQ02781 134 aa8.84□□□□□ -0.99
SPC42YKL042W GLN1P32288 370 aaKnown RBP8.83□□□□□ -1
SPC42YKL042W FPK1P53739 893 aa8.82□□□□□ -1
SPC42YKL042W GAR1P28007 205 aaKnown RBP8.81□□□□□ -1
SPC42YKL042W YBL036CP38197 257 aa8.81□□□□□ -1
SPC42YKL042W ATG32P40458 529 aa8.81□□□□□ -1
SPC42YKL042W HST2P53686 357 aa8.81□□□□□ -1
SPC42YKL042W HED1Q03937 162 aa8.81□□□□□ -1
SPC42YKL042W RPL34BP40525 121 aaKnown RBP8.8□□□□□ -1
SPC42YKL042W MMP1Q12372 583 aa8.79□□□□□ -1
SPC42YKL042W PAC1P39946 494 aaKnown RBP8.78□□□□□ -1
SPC42YKL042W PKH3Q03306 898 aaPredicted RBP8.77□□□□□ -1.01
SPC42YKL042W ESS1P22696 170 aa8.76□□□□□ -1.01
SPC42YKL042W MOD5P07884 428 aa8.75□□□□□ -1.01
SPC42YKL042W TIF1P10081 395 aaKnown RBP8.75□□□□□ -1.01
SPC42YKL042W AGE1Q04412 482 aa8.75□□□□□ -1.01
SPC42YKL042W RAD59Q12223 238 aa8.75□□□□□ -1.01
SPC42YKL042W SCJ1P25303 377 aa8.74□□□□□ -1.01
SPC42YKL042W TUB4P53378 473 aa8.74□□□□□ -1.01
SPC42YKL042W SUB2Q07478 446 aaKnown RBP8.74□□□□□ -1.01
SPC42YKL042W SSA1P10591 642 aaKnown RBP8.73□□□□□ -1.01
SPC42YKL042W GBP2P25555 427 aaKnown RBP RIP-Chip data8.73□□□□□ -1.01not detected
SPC42YKL042W BIO2P32451 375 aa8.73□□□□□ -1.01
SPC42YKL042W SIT4P20604 311 aa8.72□□□□□ -1.01
SPC42YKL042W MET22P32179 357 aa8.72□□□□□ -1.01
SPC42YKL042W YJU3P28321 313 aa8.71□□□□□ -1.02
SPC42YKL042W CSE4P36012 229 aa8.71□□□□□ -1.02
SPC42YKL042W SSA4P22202 642 aaKnown RBP8.7□□□□□ -1.02
SPC42YKL042W RTF1P53064 558 aa8.7□□□□□ -1.02
SPC42YKL042W ARG8P18544 423 aa8.69□□□□□ -1.02
SPC42YKL042W ASH1P34233 588 aa8.69□□□□□ -1.02
SPC42YKL042W GEF1P37020 779 aa8.69□□□□□ -1.02
SPC42YKL042W YNL115CP53925 644 aa8.69□□□□□ -1.02
SPC42YKL042W PUS5Q06244 254 aa8.69□□□□□ -1.02
SPC42YKL042W YPR204WQ08995 1032 aa8.69□□□□□ -1.02
SPC42YKL042W MET32Q12041 191 aa8.69□□□□□ -1.02
SPC42YKL042W RTG2P32608 588 aaKnown RBP8.67□□□□□ -1.02
SPC42YKL042W YNL108CP53929 270 aa8.67□□□□□ -1.02
SPC42YKL042W ENV9Q08651 330 aa8.66□□□□□ -1.02
SPC42YKL042W SLY41P22215 453 aa8.65□□□□□ -1.02
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms