RNA–Protein interactions for RNA: YJL208C

NUC1, Transcript of Major mitochondrial nuclease, yeastyeast

Gene NUC1, Length 990 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUC1YJL208C MHP1P43638 1398 aa12.33□□□□□ -0.44
NUC1YJL208C THI12P42883 340 aa12.31□□□□□ -0.44
NUC1YJL208C THI5P43534 340 aa12.31□□□□□ -0.44
NUC1YJL208C THI11P47183 340 aa12.31□□□□□ -0.44
NUC1YJL208C THI13Q07748 340 aa12.31□□□□□ -0.44
NUC1YJL208C MLP1Q02455 1875 aaKnown RBP12.25□□□□□ -0.45
NUC1YJL208C PSK1P31374 1356 aa12.25□□□□□ -0.45
NUC1YJL208C ORC1P54784 914 aaPredicted RBP12.23□□□□□ -0.45
NUC1YJL208C SEC3P33332 1336 aaKnown RBP12.22□□□□□ -0.45
NUC1YJL208C YCK3P39962 524 aa12.22□□□□□ -0.45
NUC1YJL208C CPS1P27614 576 aa12.21□□□□□ -0.45
NUC1YJL208C CHZ1P40019 153 aaPredicted RBP12.19□□□□□ -0.46
NUC1YJL208C RCM1P53972 490 aa12.19□□□□□ -0.46
NUC1YJL208C PPH3P32345 308 aa12.14□□□□□ -0.47
NUC1YJL208C RPL17AP05740 184 aaKnown RBP12.13□□□□□ -0.47
NUC1YJL208C RPL17BP46990 184 aaKnown RBP12.13□□□□□ -0.47
NUC1YJL208C PDS5Q04264 1277 aa12.13□□□□□ -0.47
NUC1YJL208C ADE6P38972 1358 aaKnown RBP12.12□□□□□ -0.47
NUC1YJL208C FKH1P40466 484 aa12.11□□□□□ -0.47
NUC1YJL208C MTR4P47047 1073 aaKnown RBP12.11□□□□□ -0.47
NUC1YJL208C TY4B-HP0C2J7 1802 aa12.11□□□□□ -0.47
NUC1YJL208C TY4B-JP47024 1803 aa12.11□□□□□ -0.47
NUC1YJL208C YML133CQ03099 1374 aa12.08□□□□□ -0.48
NUC1YJL208C YLL067CQ07888 1374 aa12.08□□□□□ -0.48
NUC1YJL208C YLL066CQ99208 1374 aa12.08□□□□□ -0.48
NUC1YJL208C LEU2P04173 364 aaPredicted RBP12.08□□□□□ -0.48
NUC1YJL208C PTP3P40048 928 aa12.08□□□□□ -0.48
NUC1YJL208C RRP5Q05022 1729 aaKnown RBP12.05□□□□□ -0.48
NUC1YJL208C PRP43P53131 767 aaKnown RBP12.04□□□□□ -0.48
NUC1YJL208C HAA1Q12753 694 aaKnown RBP12.04□□□□□ -0.48
NUC1YJL208C REB1P21538 810 aa12.02□□□□□ -0.49
NUC1YJL208C RTG3P38165 486 aa12.02□□□□□ -0.49
NUC1YJL208C PDI1P17967 522 aaKnown RBP12.01□□□□□ -0.49
NUC1YJL208C RTF1P53064 558 aa11.99□□□□□ -0.49
NUC1YJL208C TAP42Q04372 366 aa11.99□□□□□ -0.49
NUC1YJL208C YRF1-2P40105 1681 aa11.98□□□□□ -0.49
NUC1YJL208C SPT7P35177 1332 aa11.97□□□□□ -0.49
NUC1YJL208C GRX4P32642 244 aa11.97□□□□□ -0.49
NUC1YJL208C YAH1Q12184 172 aaKnown RBP11.97□□□□□ -0.49
NUC1YJL208C CSE4P36012 229 aa11.95□□□□□ -0.5
NUC1YJL208C PSD2P53037 1138 aaKnown RBP11.94□□□□□ -0.5
NUC1YJL208C RPS24AP0CX31 135 aaKnown RBP11.92□□□□□ -0.5
NUC1YJL208C RPS24BP0CX32 135 aaKnown RBP11.92□□□□□ -0.5
NUC1YJL208C PRP5P21372 849 aaPredicted RBP11.92□□□□□ -0.5
NUC1YJL208C PRP45P28004 379 aaPredicted RBP11.92□□□□□ -0.5
NUC1YJL208C IOC4Q04213 475 aa11.92□□□□□ -0.5
NUC1YJL208C FKS3Q04952 1785 aa11.9□□□□□ -0.5
NUC1YJL208C ENP1P38333 483 aaKnown RBP11.9□□□□□ -0.5
NUC1YJL208C KAR2P16474 682 aaKnown RBP11.89□□□□□ -0.51
NUC1YJL208C YIL177CP40434 1758 aa11.88□□□□□ -0.51
NUC1YJL208C YJL225CP40889 1758 aa11.88□□□□□ -0.51
NUC1YJL208C AUS1Q08409 1394 aa11.87□□□□□ -0.51
NUC1YJL208C URB1P34241 1764 aaKnown RBP11.85□□□□□ -0.51
NUC1YJL208C YEF3P16521 1044 aaKnown RBP11.85□□□□□ -0.51
NUC1YJL208C SLM3Q12093 417 aa11.85□□□□□ -0.51
NUC1YJL208C SNF2P22082 1703 aa11.85□□□□□ -0.51
NUC1YJL208C RPO41P13433 1351 aaKnown RBP11.84□□□□□ -0.51
NUC1YJL208C DPS1P04802 557 aaKnown RBP11.84□□□□□ -0.51
NUC1YJL208C MRPL32P25348 183 aa11.84□□□□□ -0.51
NUC1YJL208C NST1P53935 1240 aa11.84□□□□□ -0.51
NUC1YJL208C ENT1Q12518 454 aa11.84□□□□□ -0.51
NUC1YJL208C APC1P53886 1748 aa11.83□□□□□ -0.52
NUC1YJL208C RSF2P46974 1380 aa11.83□□□□□ -0.52
NUC1YJL208C MSB3P48566 633 aaPredicted RBP11.83□□□□□ -0.52
NUC1YJL208C TCB1Q12466 1186 aa11.82□□□□□ -0.52
NUC1YJL208C LEU3P08638 886 aa11.81□□□□□ -0.52
NUC1YJL208C APP1P53933 587 aa11.81□□□□□ -0.52
NUC1YJL208C GAS4Q08271 471 aa11.81□□□□□ -0.52
NUC1YJL208C TRK1P12685 1235 aa11.8□□□□□ -0.52
NUC1YJL208C ENV9Q08651 330 aa11.8□□□□□ -0.52
NUC1YJL208C HIM1Q06674 414 aa11.79□□□□□ -0.52
NUC1YJL208C IMH1Q06704 911 aaKnown RBP11.77□□□□□ -0.53
NUC1YJL208C SIR4P11978 1358 aa11.76□□□□□ -0.53
NUC1YJL208C PAP2P53632 584 aaKnown RBP11.75□□□□□ -0.53
NUC1YJL208C RPP0P05317 312 aaKnown RBP11.74□□□□□ -0.53
NUC1YJL208C ROM2P51862 1356 aaKnown RBP11.74□□□□□ -0.53
NUC1YJL208C YRF1-3P0CX14 1859 aa11.74□□□□□ -0.53
NUC1YJL208C YRF1-7P0CX15 1859 aa11.74□□□□□ -0.53
NUC1YJL208C YRF1-6P53819 1859 aa11.74□□□□□ -0.53
NUC1YJL208C XKS1P42826 600 aa11.73□□□□□ -0.53
NUC1YJL208C YIL055CP40523 627 aaKnown RBP11.72□□□□□ -0.53
NUC1YJL208C IES2P40154 320 aa11.71□□□□□ -0.53
NUC1YJL208C EDE1P34216 1381 aa11.69□□□□□ -0.54
NUC1YJL208C CTF4Q01454 927 aa11.69□□□□□ -0.54
NUC1YJL208C AKL1P38080 1108 aaKnown RBP11.68□□□□□ -0.54
NUC1YJL208C RTR1P40084 226 aaPredicted RBP11.68□□□□□ -0.54
NUC1YJL208C RRP46P53256 223 aaPredicted RBP11.68□□□□□ -0.54
NUC1YJL208C MEC3Q02574 474 aa11.68□□□□□ -0.54
NUC1YJL208C YRF1-4O13559 1382 aa11.67□□□□□ -0.54
NUC1YJL208C DSD1P53095 428 aa11.66□□□□□ -0.54
NUC1YJL208C RCR1P38212 213 aa11.64□□□□□ -0.55
NUC1YJL208C VPS27P40343 622 aaKnown RBP11.64□□□□□ -0.55
NUC1YJL208C BUB1P41695 1021 aaKnown RBP RIP-Chip data11.64□□□□□ -0.55not detected
NUC1YJL208C YDL144CQ07589 356 aa11.64□□□□□ -0.55
NUC1YJL208C PRD1P25375 712 aa11.63□□□□□ -0.55
NUC1YJL208C NSR1P27476 414 aaKnown RBP RIP-Chip data11.63□□□□□ -0.55not detected
NUC1YJL208C YKL133CP36066 463 aa11.62□□□□□ -0.55
NUC1YJL208C CDC45Q08032 650 aa11.62□□□□□ -0.55
NUC1YJL208C HSP104P31539 908 aaKnown RBP11.61□□□□□ -0.55
NUC1YJL208C YRB30P53107 440 aaPredicted RBP11.6□□□□□ -0.55
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms