RNA–Protein interactions for RNA: YJL052W

TDH1, Transcript of Glyceraldehyde-3-phosphate dehydrogenase (GAPDH), isozyme 1, yeastyeast

Gene TDH1, Length 999 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TDH1YJL052W SSM4P40318 1319 aa11.32□□□□□ -0.6
TDH1YJL052W TYS1P36421 394 aaKnown RBP11.31□□□□□ -0.6
TDH1YJL052W PSD2P53037 1138 aaKnown RBP11.31□□□□□ -0.6
TDH1YJL052W BDF1P35817 686 aa11.3□□□□□ -0.6
TDH1YJL052W GCN2P15442 1659 aa11.3□□□□□ -0.6
TDH1YJL052W TY1B-NL2Q99337 1749 aaKnown RBP11.29□□□□□ -0.6
TDH1YJL052W PDR5P33302 1511 aaKnown RBP11.28□□□□□ -0.6
TDH1YJL052W SLX5P32828 619 aaKnown RBP11.25□□□□□ -0.61
TDH1YJL052W YMR196WQ04336 1088 aa11.23□□□□□ -0.61
TDH1YJL052W CST9Q06032 482 aa11.23□□□□□ -0.61
TDH1YJL052W PDR11P40550 1411 aa11.17□□□□□ -0.62
TDH1YJL052W THI12P42883 340 aa11.16□□□□□ -0.62
TDH1YJL052W THI5P43534 340 aa11.16□□□□□ -0.62
TDH1YJL052W THI11P47183 340 aa11.16□□□□□ -0.62
TDH1YJL052W THI13Q07748 340 aa11.16□□□□□ -0.62
TDH1YJL052W PAF1P38351 445 aa11.09□□□□□ -0.63
TDH1YJL052W RAV1P47104 1357 aa11.07□□□□□ -0.64
TDH1YJL052W MRM1P25270 412 aa11.07□□□□□ -0.64
TDH1YJL052W TIF4632P39936 914 aaKnown RBP11.07□□□□□ -0.64
TDH1YJL052W MRX12P47084 519 aa11.06□□□□□ -0.64
TDH1YJL052W KRE5P22023 1365 aa11.05□□□□□ -0.64
TDH1YJL052W CFT1Q06632 1357 aaKnown RBP11.04□□□□□ -0.64
TDH1YJL052W BCK1Q01389 1478 aa11.04□□□□□ -0.64
TDH1YJL052W RIA1P53893 1110 aa11.02□□□□□ -0.65
TDH1YJL052W NUP192P47054 1683 aa11.01□□□□□ -0.65
TDH1YJL052W RTC1Q08281 1341 aa10.99□□□□□ -0.65
TDH1YJL052W DMA1P38823 416 aa10.98□□□□□ -0.65
TDH1YJL052W TGL3P40308 642 aa10.98□□□□□ -0.65
TDH1YJL052W NOP7P53261 605 aaKnown RBP10.98□□□□□ -0.65
TDH1YJL052W YNR029CP53729 429 aaKnown RBP10.96□□□□□ -0.65
TDH1YJL052W CAB1Q04430 367 aa10.94□□□□□ -0.66
TDH1YJL052W RAD9P14737 1309 aa10.93□□□□□ -0.66
TDH1YJL052W ALD4P46367 519 aaKnown RBP10.93□□□□□ -0.66
TDH1YJL052W RTG3P38165 486 aa10.92□□□□□ -0.66
TDH1YJL052W NAP1P25293 417 aaKnown RBP10.85□□□□□ -0.67
TDH1YJL052W RCR1P38212 213 aa10.85□□□□□ -0.67
TDH1YJL052W TY3B-IQ7LHG5 1498 aaKnown RBP10.83□□□□□ -0.68
TDH1YJL052W ESL2P36168 1195 aa10.82□□□□□ -0.68
TDH1YJL052W RAM2P29703 316 aa10.8□□□□□ -0.68
TDH1YJL052W APP1P53933 587 aa10.8□□□□□ -0.68
TDH1YJL052W NSR1P27476 414 aaKnown RBP RIP-Chip data10.79□□□□□ -0.68not detected
TDH1YJL052W VPS29P38759 282 aa10.79□□□□□ -0.68
TDH1YJL052W TAF5P38129 798 aa10.78□□□□□ -0.68
TDH1YJL052W TAF8Q03750 510 aa10.78□□□□□ -0.68
TDH1YJL052W YAP5P40574 245 aa10.75□□□□□ -0.69
TDH1YJL052W YMR1P47147 688 aaKnown RBP RIP-Chip data10.73□□□□□ -0.69not detected
TDH1YJL052W RRP5Q05022 1729 aaKnown RBP10.72□□□□□ -0.69
TDH1YJL052W CPS1P27614 576 aa10.72□□□□□ -0.69
TDH1YJL052W GLN1P32288 370 aaKnown RBP10.71□□□□□ -0.69
TDH1YJL052W YRF1-2P40105 1681 aa10.71□□□□□ -0.69
TDH1YJL052W RCM1P53972 490 aa10.71□□□□□ -0.69
TDH1YJL052W YOR238WQ08634 303 aa10.71□□□□□ -0.69
TDH1YJL052W ENT1Q12518 454 aa10.7□□□□□ -0.7
TDH1YJL052W TY4B-HP0C2J7 1802 aa10.68□□□□□ -0.7
TDH1YJL052W TY4B-JP47024 1803 aa10.68□□□□□ -0.7
TDH1YJL052W MAK11P20484 414 aaKnown RBP10.67□□□□□ -0.7
TDH1YJL052W DBP1P24784 617 aaKnown RBP10.66□□□□□ -0.7
TDH1YJL052W ENV9Q08651 330 aa10.66□□□□□ -0.7
TDH1YJL052W SPE2P21182 396 aa10.65□□□□□ -0.7
TDH1YJL052W PPH3P32345 308 aa10.65□□□□□ -0.7
TDH1YJL052W STS1P38637 319 aa10.65□□□□□ -0.7
TDH1YJL052W KIP3P53086 805 aaKnown RBP10.65□□□□□ -0.7
TDH1YJL052W PRP45P28004 379 aaPredicted RBP10.64□□□□□ -0.71
TDH1YJL052W PSK1P31374 1356 aa10.63□□□□□ -0.71
TDH1YJL052W MST1P07236 462 aa10.62□□□□□ -0.71
TDH1YJL052W IMH1Q06704 911 aaKnown RBP10.62□□□□□ -0.71
TDH1YJL052W PIB1Q06651 286 aa10.6□□□□□ -0.71
TDH1YJL052W ADE6P38972 1358 aaKnown RBP10.6□□□□□ -0.71
TDH1YJL052W PRP5P21372 849 aaPredicted RBP10.59□□□□□ -0.71
TDH1YJL052W YMR074CQ04773 145 aa10.59□□□□□ -0.71
TDH1YJL052W SCT1P32784 759 aa10.57□□□□□ -0.72
TDH1YJL052W YLR419WQ06698 1435 aaKnown RBP10.57□□□□□ -0.72
TDH1YJL052W SET1P38827 1080 aaKnown RBP10.55□□□□□ -0.72
TDH1YJL052W CHZ1P40019 153 aaPredicted RBP10.55□□□□□ -0.72
TDH1YJL052W ORC1P54784 914 aaPredicted RBP10.54□□□□□ -0.72
TDH1YJL052W LEU2P04173 364 aaPredicted RBP10.53□□□□□ -0.72
TDH1YJL052W COQ8P27697 501 aa10.52□□□□□ -0.73
TDH1YJL052W MTR4P47047 1073 aaKnown RBP10.52□□□□□ -0.73
TDH1YJL052W MSB3P48566 633 aaPredicted RBP10.51□□□□□ -0.73
TDH1YJL052W URB1P34241 1764 aaKnown RBP10.5□□□□□ -0.73
TDH1YJL052W LEU3P08638 886 aa10.49□□□□□ -0.73
TDH1YJL052W CSE4P36012 229 aa10.49□□□□□ -0.73
TDH1YJL052W GTT3P39996 337 aa10.49□□□□□ -0.73
TDH1YJL052W PRP43P53131 767 aaKnown RBP10.49□□□□□ -0.73
TDH1YJL052W VMA1P17255 1071 aaKnown RBP10.47□□□□□ -0.73
TDH1YJL052W TCB1Q12466 1186 aa10.47□□□□□ -0.73
TDH1YJL052W BUD31P25337 157 aaPredicted RBP10.46□□□□□ -0.73
TDH1YJL052W RSF2P46974 1380 aa10.46□□□□□ -0.74
TDH1YJL052W FKS3Q04952 1785 aa10.45□□□□□ -0.74
TDH1YJL052W RPS24AP0CX31 135 aaKnown RBP10.45□□□□□ -0.74
TDH1YJL052W RPS24BP0CX32 135 aaKnown RBP10.45□□□□□ -0.74
TDH1YJL052W IES2P40154 320 aa10.45□□□□□ -0.74
TDH1YJL052W SLM3Q12093 417 aa10.45□□□□□ -0.74
TDH1YJL052W MLP1Q02455 1875 aaKnown RBP10.44□□□□□ -0.74
TDH1YJL052W EDS1P38073 919 aa10.43□□□□□ -0.74
TDH1YJL052W NOP53Q12080 455 aaKnown RBP10.43□□□□□ -0.74
TDH1YJL052W YIL177CP40434 1758 aa10.42□□□□□ -0.74
TDH1YJL052W YJL225CP40889 1758 aa10.42□□□□□ -0.74
TDH1YJL052W ROM2P51862 1356 aaKnown RBP10.42□□□□□ -0.74
TDH1YJL052W YML133CQ03099 1374 aa10.42□□□□□ -0.74
Retrieved 100 of 5,963 RNA–protein pairs in 7.4 ms