RNA–Protein interactions for RNA: YJL047C

RTT101, Transcript of Cullin subunit of a Roc1p-dependent E3 ubiquitin ligase complex, yeastyeast

Gene RTT101, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT101YJL047C ERP5P38819 212 aa2.73□□□□□ -1.97
RTT101YJL047C NNF1P47149 201 aa2.73□□□□□ -1.97
RTT101YJL047C IOC2Q12072 812 aa2.73□□□□□ -1.97
RTT101YJL047C ASF1P32447 279 aa2.72□□□□□ -1.97
RTT101YJL047C SUB1P54000 292 aaKnown RBP2.72□□□□□ -1.97
RTT101YJL047C STM1P39015 273 aaKnown RBP2.72□□□□□ -1.97
RTT101YJL047C YLR326WQ06170 240 aaKnown RBP2.72□□□□□ -1.97
RTT101YJL047C MAG2Q06436 670 aaKnown RBP2.72□□□□□ -1.97
RTT101YJL047C SUP45P12385 437 aaKnown RBP2.71□□□□□ -1.98
RTT101YJL047C VMA1P17255 1071 aaKnown RBP2.71□□□□□ -1.98
RTT101YJL047C PSE1P32337 1089 aaKnown RBP2.71□□□□□ -1.98
RTT101YJL047C PTC3P34221 468 aaKnown RBP2.71□□□□□ -1.98
RTT101YJL047C TGL4P36165 910 aa2.71□□□□□ -1.98
RTT101YJL047C MRX10Q05648 414 aa2.71□□□□□ -1.98
RTT101YJL047C WHI5Q12416 295 aa2.71□□□□□ -1.98
RTT101YJL047C ENO2P00925 437 aaKnown RBP2.71□□□□□ -1.98
RTT101YJL047C POL32P47110 350 aa2.71□□□□□ -1.98
RTT101YJL047C MDG1P53885 366 aa2.71□□□□□ -1.98
RTT101YJL047C NST1P53935 1240 aa2.71□□□□□ -1.98
RTT101YJL047C VPS72Q03388 795 aa2.71□□□□□ -1.98
RTT101YJL047C MSC6Q08818 692 aaKnown RBP2.71□□□□□ -1.98
RTT101YJL047C GIN4Q12263 1142 aa2.71□□□□□ -1.98
RTT101YJL047C STB3Q12427 513 aa2.71□□□□□ -1.98
RTT101YJL047C SEC20P28791 383 aa2.7□□□□□ -1.98
RTT101YJL047C OSW7P43611 510 aa2.7□□□□□ -1.98
RTT101YJL047C RAD59Q12223 238 aa2.7□□□□□ -1.98
RTT101YJL047C YOL098CQ12496 1037 aa2.7□□□□□ -1.98
RTT101YJL047C PDR1P12383 1068 aa2.7□□□□□ -1.98
RTT101YJL047C YDJ1P25491 409 aaKnown RBP2.7□□□□□ -1.98
RTT101YJL047C TOM20P35180 183 aa2.7□□□□□ -1.98
RTT101YJL047C TPS3P38426 1054 aaKnown RBP2.7□□□□□ -1.98
RTT101YJL047C YHL050CP38721 697 aa2.7□□□□□ -1.98
RTT101YJL047C YHR219WP38900 624 aa2.7□□□□□ -1.98
RTT101YJL047C OYE2Q03558 400 aaKnown RBP2.7□□□□□ -1.98
RTT101YJL047C JIP5Q06214 492 aaPredicted RBP2.7□□□□□ -1.98
RTT101YJL047C YEL077CQ3E7X8 1277 aa2.7□□□□□ -1.98
RTT101YJL047C CIT2P08679 460 aa2.69□□□□□ -1.98
RTT101YJL047C TSR4P25040 408 aa2.69□□□□□ -1.98
RTT101YJL047C IOC3P43596 787 aa2.69□□□□□ -1.98
RTT101YJL047C SAM3Q08986 587 aa2.69□□□□□ -1.98
RTT101YJL047C TRL1P09880 827 aaKnown RBP2.69□□□□□ -1.98
RTT101YJL047C SEC8P32855 1065 aa2.69□□□□□ -1.98
RTT101YJL047C MDJ2P42834 146 aa2.69□□□□□ -1.98
RTT101YJL047C ULI1P43604 169 aa2.69□□□□□ -1.98
RTT101YJL047C TEA1P47988 759 aa2.69□□□□□ -1.98
RTT101YJL047C ESS1P22696 170 aa2.68□□□□□ -1.98
RTT101YJL047C SCJ1P25303 377 aa2.68□□□□□ -1.98
RTT101YJL047C YJU3P28321 313 aa2.68□□□□□ -1.98
RTT101YJL047C SOL3P38858 249 aa2.68□□□□□ -1.98
RTT101YJL047C RIM21P48565 533 aa2.68□□□□□ -1.98
RTT101YJL047C ALG12P53730 551 aa2.68□□□□□ -1.98
RTT101YJL047C PKH3Q03306 898 aaPredicted RBP2.68□□□□□ -1.98
RTT101YJL047C PPG1P32838 368 aa2.68□□□□□ -1.98
RTT101YJL047C PEP12P32854 288 aa2.68□□□□□ -1.98
RTT101YJL047C ORC6P38826 435 aa2.68□□□□□ -1.98
RTT101YJL047C PMC1P38929 1173 aaPredicted RBP2.68□□□□□ -1.98
RTT101YJL047C RGA1P39083 1007 aa2.68□□□□□ -1.98
RTT101YJL047C VAC8P39968 578 aa2.68□□□□□ -1.98
RTT101YJL047C NIS1P53939 407 aa2.68□□□□□ -1.98
RTT101YJL047C ALD3P54114 506 aa2.68□□□□□ -1.98
RTT101YJL047C ECM23Q02710 187 aa2.68□□□□□ -1.98
RTT101YJL047C RDS2P19541 446 aaKnown RBP2.67□□□□□ -1.98
RTT101YJL047C CSE4P36012 229 aa2.67□□□□□ -1.98
RTT101YJL047C GRS1P38088 690 aaKnown RBP2.67□□□□□ -1.98
RTT101YJL047C PCS60P38137 543 aaKnown RBP RIP-Chip data2.67□□□□□ -1.98not detected
RTT101YJL047C SVF1Q05515 481 aa2.67□□□□□ -1.98
RTT101YJL047C SIS2P36024 562 aa2.67□□□□□ -1.98
RTT101YJL047C MET1P36150 593 aa2.67□□□□□ -1.98
RTT101YJL047C KTR7P40504 517 aa2.67□□□□□ -1.98
RTT101YJL047C KAR5Q04746 504 aa2.67□□□□□ -1.98
RTT101YJL047C MAK16P10962 306 aaPredicted RBP2.66□□□□□ -1.98
RTT101YJL047C KIC1P38692 1080 aa2.66□□□□□ -1.98
RTT101YJL047C PPX1P38698 397 aa2.66□□□□□ -1.98
RTT101YJL047C FYV10P40492 516 aa2.66□□□□□ -1.98
RTT101YJL047C THI12P42883 340 aa2.66□□□□□ -1.98
RTT101YJL047C THI5P43534 340 aa2.66□□□□□ -1.98
RTT101YJL047C YJR107WP47145 328 aa2.66□□□□□ -1.98
RTT101YJL047C THI11P47183 340 aa2.66□□□□□ -1.98
RTT101YJL047C ZDS1P50111 915 aaKnown RBP2.66□□□□□ -1.98
RTT101YJL047C HST2P53686 357 aa2.66□□□□□ -1.98
RTT101YJL047C FPK1P53739 893 aa2.66□□□□□ -1.98
RTT101YJL047C THI13Q07748 340 aa2.66□□□□□ -1.98
RTT101YJL047C SRP40P32583 406 aaPredicted RBP2.66□□□□□ -1.98
RTT101YJL047C RAD54P32863 898 aa2.66□□□□□ -1.98
RTT101YJL047C YKL091CP33324 310 aaKnown RBP2.66□□□□□ -1.98
RTT101YJL047C RRP14P36080 434 aaKnown RBP2.66□□□□□ -1.98
RTT101YJL047C ALD6P54115 500 aaKnown RBP2.66□□□□□ -1.98
RTT101YJL047C CWC15Q03772 175 aaKnown RBP2.66□□□□□ -1.98
RTT101YJL047C YOL036WQ08206 761 aa2.66□□□□□ -1.98
RTT101YJL047C YOL057WQ08225 711 aa2.66□□□□□ -1.98
RTT101YJL047C RGR1P19263 1082 aa2.65□□□□□ -1.99
RTT101YJL047C UBX7P38349 436 aa2.65□□□□□ -1.99
RTT101YJL047C FPR3P38911 411 aaKnown RBP2.65□□□□□ -1.99
RTT101YJL047C BOL3P39724 118 aa2.65□□□□□ -1.99
RTT101YJL047C MMP1Q12372 583 aa2.65□□□□□ -1.99
RTT101YJL047C SSB1P11484 613 aaKnown RBP2.65□□□□□ -1.99
RTT101YJL047C SSB2P40150 613 aaKnown RBP2.65□□□□□ -1.99
RTT101YJL047C TPM2P40414 161 aa2.65□□□□□ -1.99
RTT101YJL047C MNL2Q12205 849 aa2.65□□□□□ -1.99
RTT101YJL047C FRT1Q99332 602 aa2.65□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 70.6 ms