RNA–Protein interactions for RNA: YIR012W

SQT1, Transcript of Protein involved in 60S ribosomal subunit assembly or modification, yeastyeast

Gene SQT1, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SQT1YIR012W SCY1P53009 804 aa8.56□□□□□ -1.04
SQT1YIR012W YIL055CP40523 627 aaKnown RBP8.55□□□□□ -1.04
SQT1YIR012W NUP192P47054 1683 aa8.55□□□□□ -1.04
SQT1YIR012W PSD2P53037 1138 aaKnown RBP8.54□□□□□ -1.04
SQT1YIR012W ESL2P36168 1195 aa8.53□□□□□ -1.04
SQT1YIR012W BNI1P41832 1953 aa8.52□□□□□ -1.05
SQT1YIR012W LEU3P08638 886 aa8.51□□□□□ -1.05
SQT1YIR012W ITT1Q04638 464 aa8.51□□□□□ -1.05
SQT1YIR012W KIP3P53086 805 aaKnown RBP8.5□□□□□ -1.05
SQT1YIR012W PRS1P32895 427 aaKnown RBP8.49□□□□□ -1.05
SQT1YIR012W PDS5Q04264 1277 aa8.49□□□□□ -1.05
SQT1YIR012W TYS1P36421 394 aaKnown RBP8.47□□□□□ -1.05
SQT1YIR012W IPL1P38991 367 aa8.47□□□□□ -1.05
SQT1YIR012W PTP3P40048 928 aa8.47□□□□□ -1.05
SQT1YIR012W URN1Q06525 465 aaKnown RBP8.45□□□□□ -1.06
SQT1YIR012W SPE2P21182 396 aa8.44□□□□□ -1.06
SQT1YIR012W BCH2P36122 765 aa8.44□□□□□ -1.06
SQT1YIR012W SCT1P32784 759 aa8.43□□□□□ -1.06
SQT1YIR012W NST1P53935 1240 aa8.43□□□□□ -1.06
SQT1YIR012W BCK1Q01389 1478 aa8.43□□□□□ -1.06
SQT1YIR012W YAP3P38749 330 aa8.41□□□□□ -1.06
SQT1YIR012W RSM7P47150 247 aa8.41□□□□□ -1.06
SQT1YIR012W RAD9P14737 1309 aa8.4□□□□□ -1.06
SQT1YIR012W YAH1Q12184 172 aaKnown RBP8.4□□□□□ -1.06
SQT1YIR012W HAP1P0CE41 1502 aa8.39□□□□□ -1.07
SQT1YIR012W SSP1P38871 571 aa8.39□□□□□ -1.07
SQT1YIR012W ALD4P46367 519 aaKnown RBP8.39□□□□□ -1.07
SQT1YIR012W TAF8Q03750 510 aa8.39□□□□□ -1.07
SQT1YIR012W RTG3P38165 486 aa8.34□□□□□ -1.07
SQT1YIR012W CAB1Q04430 367 aa8.34□□□□□ -1.07
SQT1YIR012W ARP8Q12386 881 aaKnown RBP RIP-Chip data8.34□□□□□ -1.07not detected
SQT1YIR012W FKH1P40466 484 aa8.33□□□□□ -1.08
SQT1YIR012W CHZ1P40019 153 aaPredicted RBP8.32□□□□□ -1.08
SQT1YIR012W YLR271WQ06152 274 aa8.32□□□□□ -1.08
SQT1YIR012W NAP1P25293 417 aaKnown RBP8.31□□□□□ -1.08
SQT1YIR012W YML133CQ03099 1374 aa8.3□□□□□ -1.08
SQT1YIR012W YLL067CQ07888 1374 aa8.3□□□□□ -1.08
SQT1YIR012W YLL066CQ99208 1374 aa8.3□□□□□ -1.08
SQT1YIR012W DNF3Q12674 1656 aa8.3□□□□□ -1.08
SQT1YIR012W BBC1P47068 1157 aa8.29□□□□□ -1.08
SQT1YIR012W MLP1Q02455 1875 aaKnown RBP8.29□□□□□ -1.08
SQT1YIR012W KRE5P22023 1365 aa8.28□□□□□ -1.08
SQT1YIR012W RPP0P05317 312 aaKnown RBP8.28□□□□□ -1.08
SQT1YIR012W YEF3P16521 1044 aaKnown RBP8.28□□□□□ -1.08
SQT1YIR012W IOC4Q04213 475 aa8.28□□□□□ -1.08
SQT1YIR012W EPS1P40557 701 aa8.27□□□□□ -1.09
SQT1YIR012W CFT1Q06632 1357 aaKnown RBP8.26□□□□□ -1.09
SQT1YIR012W AI2P03876 854 aa8.26□□□□□ -1.09
SQT1YIR012W TRK1P12685 1235 aa8.26□□□□□ -1.09
SQT1YIR012W MST1P07236 462 aa8.25□□□□□ -1.09
SQT1YIR012W VPS27P40343 622 aaKnown RBP8.25□□□□□ -1.09
SQT1YIR012W MRX12P47084 519 aa8.25□□□□□ -1.09
SQT1YIR012W CDC45Q08032 650 aa8.25□□□□□ -1.09
SQT1YIR012W PSK1P31374 1356 aa8.24□□□□□ -1.09
SQT1YIR012W BDF1P35817 686 aa8.22□□□□□ -1.09
SQT1YIR012W RIA1P53893 1110 aa8.22□□□□□ -1.09
SQT1YIR012W RCM1P53972 490 aa8.22□□□□□ -1.09
SQT1YIR012W YDL144CQ07589 356 aa8.22□□□□□ -1.09
SQT1YIR012W SNF2P22082 1703 aa8.2□□□□□ -1.1
SQT1YIR012W PPH3P32345 308 aa8.2□□□□□ -1.1
SQT1YIR012W RVB2Q12464 471 aaKnown RBP8.2□□□□□ -1.1
SQT1YIR012W FUN12P39730 1002 aaKnown RBP8.19□□□□□ -1.1
SQT1YIR012W MAK10Q02197 733 aa8.18□□□□□ -1.1
SQT1YIR012W SUI2P20459 304 aaKnown RBP8.17□□□□□ -1.1
SQT1YIR012W RRP46P53256 223 aaPredicted RBP8.17□□□□□ -1.1
SQT1YIR012W MPP10P47083 593 aaKnown RBP8.16□□□□□ -1.1
SQT1YIR012W YRB30P53107 440 aaPredicted RBP8.16□□□□□ -1.1
SQT1YIR012W TAP42Q04372 366 aa8.16□□□□□ -1.1
SQT1YIR012W KAR2P16474 682 aaKnown RBP8.15□□□□□ -1.1
SQT1YIR012W CPS1P27614 576 aa8.15□□□□□ -1.1
SQT1YIR012W MGA2P40578 1113 aa8.15□□□□□ -1.1
SQT1YIR012W YNR029CP53729 429 aaKnown RBP8.15□□□□□ -1.1
SQT1YIR012W AUS1Q08409 1394 aa8.14□□□□□ -1.11
SQT1YIR012W PDI1P17967 522 aaKnown RBP8.14□□□□□ -1.11
SQT1YIR012W RTR1P40084 226 aaPredicted RBP8.14□□□□□ -1.11
SQT1YIR012W LEU2P04173 364 aaPredicted RBP8.13□□□□□ -1.11
SQT1YIR012W YOR238WQ08634 303 aa8.13□□□□□ -1.11
SQT1YIR012W MTR4P47047 1073 aaKnown RBP8.12□□□□□ -1.11
SQT1YIR012W NAB6Q03735 1134 aaKnown RBP RIP-Chip data8.11□□□□□ -1.11not detected
SQT1YIR012W HIM1Q06674 414 aa8.11□□□□□ -1.11
SQT1YIR012W GRX4P32642 244 aa8.1□□□□□ -1.11
SQT1YIR012W RTF1P53064 558 aa8.1□□□□□ -1.11
SQT1YIR012W TY1B-NL2Q99337 1749 aaKnown RBP8.09□□□□□ -1.11
SQT1YIR012W PRD1P25375 712 aa8.09□□□□□ -1.11
SQT1YIR012W SAP155P43612 1002 aa8.09□□□□□ -1.11
SQT1YIR012W YBL029C-AQ3E756 94 aa8.09□□□□□ -1.11
SQT1YIR012W ADE6P38972 1358 aaKnown RBP8.09□□□□□ -1.12
SQT1YIR012W FPR3P38911 411 aaKnown RBP8.08□□□□□ -1.12
SQT1YIR012W PAP2P53632 584 aaKnown RBP8.08□□□□□ -1.12
SQT1YIR012W THI22Q06490 572 aa8.08□□□□□ -1.12
SQT1YIR012W ABP1P15891 592 aaKnown RBP8.07□□□□□ -1.12
SQT1YIR012W RPC31P17890 251 aa8.06□□□□□ -1.12
SQT1YIR012W TPD3P31383 635 aa8.06□□□□□ -1.12
SQT1YIR012W PRP43P53131 767 aaKnown RBP8.06□□□□□ -1.12
SQT1YIR012W HEF3P53978 1044 aaKnown RBP8.06□□□□□ -1.12
SQT1YIR012W USO1P25386 1790 aa8.06□□□□□ -1.12
SQT1YIR012W RPO41P13433 1351 aaKnown RBP8.06□□□□□ -1.12
SQT1YIR012W RPS24AP0CX31 135 aaKnown RBP8.05□□□□□ -1.12
SQT1YIR012W RPS24BP0CX32 135 aaKnown RBP8.05□□□□□ -1.12
SQT1YIR012W SIR4P11978 1358 aa8.05□□□□□ -1.12
Retrieved 100 of 5,963 RNA–protein pairs in 56.4 ms