RNA–Protein interactions for RNA: YHR171W

ATG7, Transcript of Autophagy-related protein and dual specificity member of the E1 family, yeastyeast

Gene ATG7, Length 1,893 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG7YHR171W YHL050CP38721 697 aa7.59□□□□□ -1.19
ATG7YHR171W YHR219WP38900 624 aa7.59□□□□□ -1.19
ATG7YHR171W YEL077CQ3E7X8 1277 aa7.59□□□□□ -1.19
ATG7YHR171W TSR4P25040 408 aa7.58□□□□□ -1.2
ATG7YHR171W SEC8P32855 1065 aa7.58□□□□□ -1.2
ATG7YHR171W OYE2Q03558 400 aaKnown RBP7.58□□□□□ -1.2
ATG7YHR171W FPR3P38911 411 aaKnown RBP7.58□□□□□ -1.2
ATG7YHR171W YMR1P47147 688 aaKnown RBP RIP-Chip data7.58□□□□□ -1.2not detected
ATG7YHR171W RIM21P48565 533 aa7.58□□□□□ -1.2
ATG7YHR171W MRPL32P25348 183 aa7.57□□□□□ -1.2
ATG7YHR171W YDJ1P25491 409 aaKnown RBP7.57□□□□□ -1.2
ATG7YHR171W PPG1P32838 368 aa7.57□□□□□ -1.2
ATG7YHR171W RRP14P36080 434 aaKnown RBP7.57□□□□□ -1.2
ATG7YHR171W JIP5Q06214 492 aaPredicted RBP7.56□□□□□ -1.2
ATG7YHR171W CIT2P08679 460 aa7.55□□□□□ -1.2
ATG7YHR171W PPX1P38698 397 aa7.55□□□□□ -1.2
ATG7YHR171W MDJ2P42834 146 aa7.55□□□□□ -1.2
ATG7YHR171W TPS3P38426 1054 aaKnown RBP7.55□□□□□ -1.2
ATG7YHR171W IOC3P43596 787 aa7.55□□□□□ -1.2
ATG7YHR171W ALG12P53730 551 aa7.55□□□□□ -1.2
ATG7YHR171W PEP12P32854 288 aa7.54□□□□□ -1.2
ATG7YHR171W ORC6P38826 435 aa7.54□□□□□ -1.2
ATG7YHR171W NAB3P38996 802 aaKnown RBP RIP-Chip data7.54□□□□□ -1.2not detected
ATG7YHR171W YCK3P39962 524 aa7.53□□□□□ -1.2
ATG7YHR171W ZDS1P50111 915 aaKnown RBP7.53□□□□□ -1.2
ATG7YHR171W HST2P53686 357 aa7.53□□□□□ -1.2
ATG7YHR171W PKH3Q03306 898 aaPredicted RBP7.53□□□□□ -1.2
ATG7YHR171W KIC1P38692 1080 aa7.53□□□□□ -1.2
ATG7YHR171W PMC1P38929 1173 aaPredicted RBP7.53□□□□□ -1.2
ATG7YHR171W PCS60P38137 543 aaKnown RBP RIP-Chip data7.52□□□□□ -1.21 RIP-Chip
ATG7YHR171W YFR006WP43590 535 aa7.52□□□□□ -1.21
ATG7YHR171W YJR107WP47145 328 aa7.52□□□□□ -1.21
ATG7YHR171W NIS1P53939 407 aa7.52□□□□□ -1.21
ATG7YHR171W ECM23Q02710 187 aa7.52□□□□□ -1.21
ATG7YHR171W ESS1P22696 170 aa7.51□□□□□ -1.21
ATG7YHR171W DBP1P24784 617 aaKnown RBP7.51□□□□□ -1.21
ATG7YHR171W VAC8P39968 578 aa7.51□□□□□ -1.21
ATG7YHR171W FPK1P53739 893 aa7.51□□□□□ -1.21
ATG7YHR171W ALD3P54114 506 aa7.51□□□□□ -1.21
ATG7YHR171W KAR5Q04746 504 aa7.51□□□□□ -1.21
ATG7YHR171W SSB1P11484 613 aaKnown RBP7.5□□□□□ -1.21
ATG7YHR171W SRP40P32583 406 aaPredicted RBP7.5□□□□□ -1.21
ATG7YHR171W GRS1P38088 690 aaKnown RBP7.5□□□□□ -1.21
ATG7YHR171W SSB2P40150 613 aaKnown RBP7.5□□□□□ -1.21
ATG7YHR171W TPM2P40414 161 aa7.5□□□□□ -1.21
ATG7YHR171W TFG1P41895 735 aaPredicted RBP7.5□□□□□ -1.21
ATG7YHR171W SPT5P27692 1063 aaKnown RBP7.49□□□□□ -1.21
ATG7YHR171W YJU3P28321 313 aa7.49□□□□□ -1.21
ATG7YHR171W MET1P36150 593 aa7.49□□□□□ -1.21
ATG7YHR171W RDS2P19541 446 aaKnown RBP7.49□□□□□ -1.21
ATG7YHR171W SCJ1P25303 377 aa7.49□□□□□ -1.21
ATG7YHR171W CWC15Q03772 175 aaKnown RBP7.49□□□□□ -1.21
ATG7YHR171W HAA1Q12753 694 aaKnown RBP7.49□□□□□ -1.21
ATG7YHR171W RGR1P19263 1082 aa7.48□□□□□ -1.21
ATG7YHR171W YKL091CP33324 310 aaKnown RBP7.48□□□□□ -1.21
ATG7YHR171W GRX4P32642 244 aa7.47□□□□□ -1.21
ATG7YHR171W RAD54P32863 898 aa7.47□□□□□ -1.21
ATG7YHR171W THI12P42883 340 aa7.47□□□□□ -1.21
ATG7YHR171W THI5P43534 340 aa7.47□□□□□ -1.21
ATG7YHR171W THI11P47183 340 aa7.47□□□□□ -1.21
ATG7YHR171W THI13Q07748 340 aa7.47□□□□□ -1.21
ATG7YHR171W YOL057WQ08225 711 aa7.47□□□□□ -1.21
ATG7YHR171W MMP1Q12372 583 aa7.47□□□□□ -1.21
ATG7YHR171W MNL2Q12205 849 aa7.46□□□□□ -1.22
ATG7YHR171W UBX7P38349 436 aa7.45□□□□□ -1.22
ATG7YHR171W BUD6P41697 788 aa7.45□□□□□ -1.22
ATG7YHR171W ALD6P54115 500 aaKnown RBP7.45□□□□□ -1.22
ATG7YHR171W RPN4Q03465 531 aa7.45□□□□□ -1.22
ATG7YHR171W CLB5P30283 435 aa7.44□□□□□ -1.22
ATG7YHR171W KTR7P40504 517 aa7.44□□□□□ -1.22
ATG7YHR171W UBP3Q01477 912 aaKnown RBP RIP-Chip data7.44□□□□□ -1.22not detected
ATG7YHR171W POB3Q04636 552 aaKnown RBP7.44□□□□□ -1.22
ATG7YHR171W NSE3Q05541 303 aa7.44□□□□□ -1.22
ATG7YHR171W ARG8P18544 423 aa7.43□□□□□ -1.22
ATG7YHR171W MET4P32389 672 aa7.43□□□□□ -1.22
ATG7YHR171W MGE1P38523 228 aa7.43□□□□□ -1.22
ATG7YHR171W FYV10P40492 516 aa7.43□□□□□ -1.22
ATG7YHR171W YGR273CP53329 174 aa7.43□□□□□ -1.22
ATG7YHR171W GAL2P13181 574 aa7.43□□□□□ -1.22
ATG7YHR171W RSC30P38781 883 aa7.43□□□□□ -1.22
ATG7YHR171W ATG1P53104 897 aa7.43□□□□□ -1.22
ATG7YHR171W YMR196WQ04336 1088 aa7.43□□□□□ -1.22
ATG7YHR171W FRT1Q99332 602 aa7.43□□□□□ -1.22
ATG7YHR171W BOL3P39724 118 aa7.42□□□□□ -1.22
ATG7YHR171W MVP1P40959 511 aaKnown RBP7.42□□□□□ -1.22
ATG7YHR171W NUT2Q06213 157 aa7.42□□□□□ -1.22
ATG7YHR171W SSF2Q12153 453 aaPredicted RBP7.42□□□□□ -1.22
ATG7YHR171W VPS16Q03308 798 aa7.41□□□□□ -1.22
ATG7YHR171W PBP2P38151 413 aaKnown RBP RIP-Chip data7.4□□□□□ -1.23not detected
ATG7YHR171W SCY1P53009 804 aa7.39□□□□□ -1.23
ATG7YHR171W BRE1Q07457 700 aaKnown RBP7.39□□□□□ -1.23
ATG7YHR171W YDL121CQ07541 149 aa7.39□□□□□ -1.23
ATG7YHR171W PIN2Q12057 282 aa7.39□□□□□ -1.23
ATG7YHR171W GAL11P19659 1081 aa7.38□□□□□ -1.23
ATG7YHR171W YJR142WP47173 342 aa7.38□□□□□ -1.23
ATG7YHR171W NOP2P40991 618 aaKnown RBP7.38□□□□□ -1.23
ATG7YHR171W STI1P15705 589 aaKnown RBP RIP-Chip data7.37□□□□□ -1.23not detected
ATG7YHR171W RPA135P22138 1203 aaKnown RBP7.37□□□□□ -1.23
ATG7YHR171W SSD1P24276 1250 aaKnown RBP RIP-Chip data7.37□□□□□ -1.23not detected
ATG7YHR171W ENP1P38333 483 aaKnown RBP7.37□□□□□ -1.23
Retrieved 100 of 5,963 RNA–protein pairs in 7.9 ms