RNA–Protein interactions for RNA: YGR109C

CLB6, Transcript of B-type cyclin involved in DNA replication during S phase, yeastyeast

Gene CLB6, Length 1,143 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CLB6YGR109C PAF1P38351 445 aa14.04□□□□□ -0.16
CLB6YGR109C IML1P47170 1584 aa14.04□□□□□ -0.16
CLB6YGR109C PDR5P33302 1511 aaKnown RBP14.02□□□□□ -0.16
CLB6YGR109C VMR1P38735 1592 aa14.01□□□□□ -0.17
CLB6YGR109C RAM2P29703 316 aa13.99□□□□□ -0.17
CLB6YGR109C YMR196WQ04336 1088 aa13.99□□□□□ -0.17
CLB6YGR109C EPS1P40557 701 aa13.94□□□□□ -0.18
CLB6YGR109C TY1B-NL2Q99337 1749 aaKnown RBP13.91□□□□□ -0.18
CLB6YGR109C NOP7P53261 605 aaKnown RBP13.9□□□□□ -0.18
CLB6YGR109C MRM1P25270 412 aa13.89□□□□□ -0.19
CLB6YGR109C SET1P38827 1080 aaKnown RBP13.89□□□□□ -0.19
CLB6YGR109C RAV1P47104 1357 aa13.88□□□□□ -0.19
CLB6YGR109C RPN1P38764 993 aaKnown RBP13.87□□□□□ -0.19
CLB6YGR109C PDR11P40550 1411 aa13.85□□□□□ -0.19
CLB6YGR109C MRX12P47084 519 aa13.84□□□□□ -0.19
CLB6YGR109C YPR148CQ06523 435 aa13.83□□□□□ -0.2
CLB6YGR109C USO1P25386 1790 aa13.82□□□□□ -0.2
CLB6YGR109C RCR1P38212 213 aa13.82□□□□□ -0.2
CLB6YGR109C RTC1Q08281 1341 aa13.81□□□□□ -0.2
CLB6YGR109C BDF1P35817 686 aa13.8□□□□□ -0.2
CLB6YGR109C THI12P42883 340 aa13.8□□□□□ -0.2
CLB6YGR109C THI5P43534 340 aa13.8□□□□□ -0.2
CLB6YGR109C THI11P47183 340 aa13.8□□□□□ -0.2
CLB6YGR109C THI13Q07748 340 aa13.8□□□□□ -0.2
CLB6YGR109C VPS70P47161 811 aa13.77□□□□□ -0.21
CLB6YGR109C SPB4P25808 606 aaPredicted RBP13.75□□□□□ -0.21
CLB6YGR109C RTG3P38165 486 aa13.74□□□□□ -0.21
CLB6YGR109C NAP1P25293 417 aaKnown RBP13.73□□□□□ -0.21
CLB6YGR109C RIA1P53893 1110 aa13.73□□□□□ -0.21
CLB6YGR109C BCK1Q01389 1478 aa13.73□□□□□ -0.21
CLB6YGR109C CFT1Q06632 1357 aaKnown RBP13.72□□□□□ -0.21
CLB6YGR109C KRE5P22023 1365 aa13.71□□□□□ -0.21
CLB6YGR109C ALD4P46367 519 aaKnown RBP13.71□□□□□ -0.21
CLB6YGR109C MAK11P20484 414 aaKnown RBP13.69□□□□□ -0.22
CLB6YGR109C SCY1P53009 804 aa13.69□□□□□ -0.22
CLB6YGR109C ESL2P36168 1195 aa13.68□□□□□ -0.22
CLB6YGR109C YNR029CP53729 429 aaKnown RBP13.65□□□□□ -0.22
CLB6YGR109C CAB1Q04430 367 aa13.65□□□□□ -0.22
CLB6YGR109C DMA2P53924 522 aa13.64□□□□□ -0.23
CLB6YGR109C RAD9P14737 1309 aa13.63□□□□□ -0.23
CLB6YGR109C SCT1P32784 759 aa13.57□□□□□ -0.24
CLB6YGR109C NUP192P47054 1683 aa13.56□□□□□ -0.24
CLB6YGR109C TAF5P38129 798 aa13.56□□□□□ -0.24
CLB6YGR109C UBP10P53874 792 aaPredicted RBP13.55□□□□□ -0.24
CLB6YGR109C MAP2P38174 421 aaKnown RBP13.52□□□□□ -0.25
CLB6YGR109C DSF2P38213 736 aa13.52□□□□□ -0.25
CLB6YGR109C TAF8Q03750 510 aa13.52□□□□□ -0.25
CLB6YGR109C VPS29P38759 282 aa13.51□□□□□ -0.25
CLB6YGR109C COQ8P27697 501 aa13.49□□□□□ -0.25
CLB6YGR109C PBS2P08018 668 aa13.48□□□□□ -0.25
CLB6YGR109C CPS1P27614 576 aa13.42□□□□□ -0.26
CLB6YGR109C KIP3P53086 805 aaKnown RBP13.42□□□□□ -0.26
CLB6YGR109C SPE2P21182 396 aa13.41□□□□□ -0.26
CLB6YGR109C NOP53Q12080 455 aaKnown RBP13.39□□□□□ -0.27
CLB6YGR109C TY3B-IQ7LHG5 1498 aaKnown RBP13.39□□□□□ -0.27
CLB6YGR109C RCM1P53972 490 aa13.38□□□□□ -0.27
CLB6YGR109C SLX5P32828 619 aaKnown RBP13.37□□□□□ -0.27
CLB6YGR109C YMR1P47147 688 aaKnown RBP RIP-Chip data13.37□□□□□ -0.27not detected
CLB6YGR109C YNR021WP53723 404 aaKnown RBP13.37□□□□□ -0.27
CLB6YGR109C STS1P38637 319 aa13.32□□□□□ -0.28
CLB6YGR109C PSK1P31374 1356 aa13.32□□□□□ -0.28
CLB6YGR109C MAM3Q12296 706 aa13.31□□□□□ -0.28
CLB6YGR109C KIN1P13185 1064 aa13.3□□□□□ -0.28
CLB6YGR109C EDS1P38073 919 aa13.3□□□□□ -0.28
CLB6YGR109C CHZ1P40019 153 aaPredicted RBP13.3□□□□□ -0.28
CLB6YGR109C APP1P53933 587 aa13.3□□□□□ -0.28
CLB6YGR109C PPH3P32345 308 aa13.29□□□□□ -0.28
CLB6YGR109C REF2P42073 533 aaPredicted RBP13.29□□□□□ -0.28
CLB6YGR109C ENT1Q12518 454 aa13.28□□□□□ -0.28
CLB6YGR109C ORC1P54784 914 aaPredicted RBP13.27□□□□□ -0.29
CLB6YGR109C RLF2Q12495 606 aa13.27□□□□□ -0.29
CLB6YGR109C YLR419WQ06698 1435 aaKnown RBP13.27□□□□□ -0.29
CLB6YGR109C PRP45P28004 379 aaPredicted RBP13.26□□□□□ -0.29
CLB6YGR109C LEU2P04173 364 aaPredicted RBP13.25□□□□□ -0.29
CLB6YGR109C YGL015CP33199 130 aa13.25□□□□□ -0.29
CLB6YGR109C IES2P40154 320 aa13.25□□□□□ -0.29
CLB6YGR109C DBP1P24784 617 aaKnown RBP13.24□□□□□ -0.29
CLB6YGR109C GLC3P32775 704 aa13.24□□□□□ -0.29
CLB6YGR109C MTR4P47047 1073 aaKnown RBP13.24□□□□□ -0.29
CLB6YGR109C POL5P39985 1022 aaKnown RBP13.23□□□□□ -0.29
CLB6YGR109C ADE6P38972 1358 aaKnown RBP13.22□□□□□ -0.29
CLB6YGR109C PRP5P21372 849 aaPredicted RBP13.22□□□□□ -0.29
CLB6YGR109C AIM7Q12156 149 aa13.22□□□□□ -0.29
CLB6YGR109C ENV9Q08651 330 aa13.21□□□□□ -0.29
CLB6YGR109C IMH1Q06704 911 aaKnown RBP13.18□□□□□ -0.3
CLB6YGR109C NUP42P49686 430 aaKnown RBP13.17□□□□□ -0.3
CLB6YGR109C PRP43P53131 767 aaKnown RBP13.17□□□□□ -0.3
CLB6YGR109C YOR238WQ08634 303 aa13.17□□□□□ -0.3
CLB6YGR109C MAK21Q12176 1025 aaKnown RBP13.16□□□□□ -0.3
CLB6YGR109C GLN1P32288 370 aaKnown RBP13.15□□□□□ -0.3
CLB6YGR109C RRP5Q05022 1729 aaKnown RBP13.14□□□□□ -0.31
CLB6YGR109C DIT2P21595 489 aa13.14□□□□□ -0.31
CLB6YGR109C PTC3P34221 468 aaKnown RBP13.14□□□□□ -0.31
CLB6YGR109C CSE4P36012 229 aa13.14□□□□□ -0.31
CLB6YGR109C FKH1P40466 484 aa13.1□□□□□ -0.31
CLB6YGR109C RTF1P53064 558 aa13.1□□□□□ -0.31
CLB6YGR109C COX6P00427 148 aa13.09□□□□□ -0.31
CLB6YGR109C HGH1P48362 394 aaKnown RBP13.09□□□□□ -0.31
CLB6YGR109C YMR074CQ04773 145 aa13.09□□□□□ -0.31
CLB6YGR109C TCB1Q12466 1186 aa13.09□□□□□ -0.31
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms