RNA–Protein interactions for RNA: YER098W

UBP9, Transcript of Ubiquitin-specific protease that cleaves ubiquitin-protein fusions, yeastyeast

Gene UBP9, Length 2,265 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP9YER098W TIF4632P39936 914 aaKnown RBP7.03□□□□□ -1.28
UBP9YER098W SPT5P27692 1063 aaKnown RBP7.02□□□□□ -1.29
UBP9YER098W CSC1Q06538 782 aa7.02□□□□□ -1.29
UBP9YER098W IPL1P38991 367 aa7.01□□□□□ -1.29
UBP9YER098W MPH3P0CE00 602 aa7.01□□□□□ -1.29
UBP9YER098W MAK16P10962 306 aaPredicted RBP7.01□□□□□ -1.29
UBP9YER098W SIT4P20604 311 aa7.01□□□□□ -1.29
UBP9YER098W AI4P03878 556 aa7□□□□□ -1.29
UBP9YER098W SLI15P38283 698 aa6.99□□□□□ -1.29
UBP9YER098W RSC30P38781 883 aa6.99□□□□□ -1.29
UBP9YER098W ECM23Q02710 187 aa6.98□□□□□ -1.29
UBP9YER098W ITT1Q04638 464 aa6.98□□□□□ -1.29
UBP9YER098W YBL113CQ7M4S9 792 aa6.98□□□□□ -1.29
UBP9YER098W STM1P39015 273 aaKnown RBP6.97□□□□□ -1.29
UBP9YER098W KTR7P40504 517 aa6.97□□□□□ -1.29
UBP9YER098W RPP1BP10622 106 aaKnown RBP6.96□□□□□ -1.3
UBP9YER098W SLY41P22215 453 aa6.96□□□□□ -1.3
UBP9YER098W PEP12P32854 288 aa6.96□□□□□ -1.3
UBP9YER098W TGL3P40308 642 aa6.96□□□□□ -1.3
UBP9YER098W CDC73Q06697 393 aa6.96□□□□□ -1.3
UBP9YER098W HTA1P04911 132 aaKnown RBP6.95□□□□□ -1.3
UBP9YER098W HTA2P04912 132 aa6.95□□□□□ -1.3
UBP9YER098W ASF1P32447 279 aa6.95□□□□□ -1.3
UBP9YER098W YOL036WQ08206 761 aa6.95□□□□□ -1.3
UBP9YER098W TFB4Q12004 338 aa6.95□□□□□ -1.3
UBP9YER098W RDS2P19541 446 aaKnown RBP6.94□□□□□ -1.3
UBP9YER098W ALD2P47771 506 aa6.94□□□□□ -1.3
UBP9YER098W LAM6Q08001 693 aa6.94□□□□□ -1.3
UBP9YER098W SEC20P28791 383 aa6.94□□□□□ -1.3
UBP9YER098W ERP5P38819 212 aa6.94□□□□□ -1.3
UBP9YER098W SET4P42948 560 aa6.94□□□□□ -1.3
UBP9YER098W TUM1Q08686 304 aaKnown RBP6.94□□□□□ -1.3
UBP9YER098W GTT3P39996 337 aa6.93□□□□□ -1.3
UBP9YER098W CAB3P36076 571 aa6.93□□□□□ -1.3
UBP9YER098W YPP1P46951 817 aa6.93□□□□□ -1.3
UBP9YER098W PEX21P50091 288 aa6.93□□□□□ -1.3
UBP9YER098W YTA7P40340 1379 aa6.92□□□□□ -1.3
UBP9YER098W DAN4P47179 1161 aa6.92□□□□□ -1.3
UBP9YER098W UBX7P38349 436 aa6.92□□□□□ -1.3
UBP9YER098W EBP2P36049 427 aaKnown RBP6.91□□□□□ -1.3
UBP9YER098W MCM16Q12262 181 aa6.91□□□□□ -1.3
UBP9YER098W MSC6Q08818 692 aaKnown RBP6.9□□□□□ -1.3
UBP9YER098W TRM1P15565 570 aaKnown RBP6.9□□□□□ -1.31
UBP9YER098W TPS3P38426 1054 aaKnown RBP6.9□□□□□ -1.31
UBP9YER098W NAF1P53919 492 aaKnown RBP6.9□□□□□ -1.31
UBP9YER098W KAR5Q04746 504 aa6.89□□□□□ -1.31
UBP9YER098W GAL2P13181 574 aa6.89□□□□□ -1.31
UBP9YER098W ISF1P32488 338 aa6.89□□□□□ -1.31
UBP9YER098W YEL023CP39992 682 aa6.88□□□□□ -1.31
UBP9YER098W YNL115CP53925 644 aa6.88□□□□□ -1.31
UBP9YER098W RRP15Q06511 250 aaPredicted RBP6.88□□□□□ -1.31
UBP9YER098W YHL050CP38721 697 aa6.88□□□□□ -1.31
UBP9YER098W YHR219WP38900 624 aa6.88□□□□□ -1.31
UBP9YER098W YEL077CQ3E7X8 1277 aa6.88□□□□□ -1.31
UBP9YER098W ATE1P16639 503 aa6.87□□□□□ -1.31
UBP9YER098W POL32P47110 350 aa6.87□□□□□ -1.31
UBP9YER098W OCA5P38738 679 aa6.87□□□□□ -1.31
UBP9YER098W TRL1P09880 827 aaKnown RBP6.86□□□□□ -1.31
UBP9YER098W GRS1P38088 690 aaKnown RBP6.86□□□□□ -1.31
UBP9YER098W RTF1P53064 558 aa6.86□□□□□ -1.31
UBP9YER098W ENV9Q08651 330 aa6.86□□□□□ -1.31
UBP9YER098W MST1P07236 462 aa6.85□□□□□ -1.31
UBP9YER098W YRR1Q12172 810 aa6.85□□□□□ -1.31
UBP9YER098W WHI5Q12416 295 aa6.85□□□□□ -1.31
UBP9YER098W BUB1P41695 1021 aaKnown RBP RIP-Chip data6.84□□□□□ -1.31not detected
UBP9YER098W MDJ2P42834 146 aa6.84□□□□□ -1.31
UBP9YER098W EMP47P43555 445 aa6.84□□□□□ -1.31
UBP9YER098W PUS6P53294 404 aa6.84□□□□□ -1.31
UBP9YER098W CWC15Q03772 175 aaKnown RBP6.84□□□□□ -1.31
UBP9YER098W THI12P42883 340 aa6.83□□□□□ -1.32
UBP9YER098W THI5P43534 340 aa6.83□□□□□ -1.32
UBP9YER098W THI11P47183 340 aa6.83□□□□□ -1.32
UBP9YER098W THI13Q07748 340 aa6.83□□□□□ -1.32
UBP9YER098W KEX2P13134 814 aa6.82□□□□□ -1.32
UBP9YER098W BRN1P38170 754 aa6.82□□□□□ -1.32
UBP9YER098W TBF1Q02457 562 aa6.81□□□□□ -1.32
UBP9YER098W PPX1P38698 397 aa6.81□□□□□ -1.32
UBP9YER098W ERF2Q06551 359 aa6.81□□□□□ -1.32
UBP9YER098W MSB4Q12317 492 aa6.8□□□□□ -1.32
UBP9YER098W OYE2Q03558 400 aaKnown RBP6.8□□□□□ -1.32
UBP9YER098W BOL3P39724 118 aa6.79□□□□□ -1.32
UBP9YER098W DPL1Q05567 589 aa6.79□□□□□ -1.32
UBP9YER098W PHO87P25360 923 aa6.79□□□□□ -1.32
UBP9YER098W SEC8P32855 1065 aa6.79□□□□□ -1.32
UBP9YER098W PTC4P38089 393 aa6.79□□□□□ -1.32
UBP9YER098W PUF6Q04373 656 aaKnown RBP6.79□□□□□ -1.32
UBP9YER098W PNP1Q05788 311 aa6.79□□□□□ -1.32
UBP9YER098W SPC42P36094 363 aa6.78□□□□□ -1.32
UBP9YER098W ALD4P46367 519 aaKnown RBP6.78□□□□□ -1.32
UBP9YER098W SVF1Q05515 481 aa6.78□□□□□ -1.32
UBP9YER098W STB3Q12427 513 aa6.78□□□□□ -1.32
UBP9YER098W ATG1P53104 897 aa6.78□□□□□ -1.32
UBP9YER098W INO80P53115 1489 aa6.77□□□□□ -1.33
UBP9YER098W NNF1P47149 201 aa6.77□□□□□ -1.33
UBP9YER098W ACS2P52910 683 aaKnown RBP6.77□□□□□ -1.33
UBP9YER098W ROM1P53046 1155 aa6.77□□□□□ -1.33
UBP9YER098W YDL206WQ12424 762 aa6.77□□□□□ -1.33
UBP9YER098W JIP5Q06214 492 aaPredicted RBP6.76□□□□□ -1.33
UBP9YER098W MPC54Q08550 464 aa6.76□□□□□ -1.33
UBP9YER098W NUD1P32336 851 aa6.76□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 57.4 ms