RNA–Protein interactions for RNA: YEL031W

SPF1, Transcript of P-type ATPase, ion transporter of the ER membrane, yeastyeast

Gene SPF1, Length 3,648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPF1YEL031W SNT2P53127 1403 aa2.91□□□□□ -1.94
SPF1YEL031W SSP1P38871 571 aa2.91□□□□□ -1.94
SPF1YEL031W BUD27P43573 796 aaKnown RBP RIP-Chip data2.91□□□□□ -1.94not detected
SPF1YEL031W ESC2Q06340 456 aa2.91□□□□□ -1.94
SPF1YEL031W CFT1Q06632 1357 aaKnown RBP2.91□□□□□ -1.94
SPF1YEL031W FUN12P39730 1002 aaKnown RBP2.91□□□□□ -1.94
SPF1YEL031W YGR130CP53278 816 aa2.91□□□□□ -1.94
SPF1YEL031W SMC3P47037 1230 aa2.91□□□□□ -1.94
SPF1YEL031W MET5P47169 1442 aa2.9□□□□□ -1.94
SPF1YEL031W TCD1P38756 429 aa2.9□□□□□ -1.94
SPF1YEL031W VTH1P40438 1549 aa2.9□□□□□ -1.95
SPF1YEL031W VTH2P40890 1549 aa2.9□□□□□ -1.95
SPF1YEL031W HAP1P0CE41 1502 aa2.9□□□□□ -1.95
SPF1YEL031W MRPL32P25348 183 aa2.89□□□□□ -1.95
SPF1YEL031W ECM16Q04217 1267 aaKnown RBP2.89□□□□□ -1.95
SPF1YEL031W IQG1Q12280 1495 aa2.89□□□□□ -1.95
SPF1YEL031W TY3B-IQ7LHG5 1498 aaKnown RBP2.89□□□□□ -1.95
SPF1YEL031W GDB1Q06625 1536 aa2.89□□□□□ -1.95
SPF1YEL031W YIL055CP40523 627 aaKnown RBP2.89□□□□□ -1.95
SPF1YEL031W GEA2P39993 1459 aaKnown RBP2.89□□□□□ -1.95
SPF1YEL031W RAD2P07276 1031 aa2.88□□□□□ -1.95
SPF1YEL031W CHZ1P40019 153 aaPredicted RBP2.88□□□□□ -1.95
SPF1YEL031W YRF1-4O13559 1382 aa2.88□□□□□ -1.95
SPF1YEL031W YML133CQ03099 1374 aa2.88□□□□□ -1.95
SPF1YEL031W YLL067CQ07888 1374 aa2.88□□□□□ -1.95
SPF1YEL031W YLL066CQ99208 1374 aa2.88□□□□□ -1.95
SPF1YEL031W HSP82P02829 709 aaKnown RBP2.88□□□□□ -1.95
SPF1YEL031W PCT1P13259 424 aa2.88□□□□□ -1.95
SPF1YEL031W MSP1P28737 362 aa2.88□□□□□ -1.95
SPF1YEL031W ARL1P38116 183 aaKnown RBP2.88□□□□□ -1.95
SPF1YEL031W SLN1P39928 1220 aaPredicted RBP2.88□□□□□ -1.95
SPF1YEL031W PIL1P53252 339 aaKnown RBP2.88□□□□□ -1.95
SPF1YEL031W FPR4Q06205 392 aaPredicted RBP2.88□□□□□ -1.95
SPF1YEL031W BUD21Q08492 214 aaPredicted RBP2.88□□□□□ -1.95
SPF1YEL031W NUG1P40010 520 aaKnown RBP2.87□□□□□ -1.95
SPF1YEL031W TPM2P40414 161 aa2.87□□□□□ -1.95
SPF1YEL031W ARO1P08566 1588 aaKnown RBP2.87□□□□□ -1.95
SPF1YEL031W DEF1P35732 738 aaKnown RBP2.87□□□□□ -1.95
SPF1YEL031W RPN1P38764 993 aaKnown RBP2.87□□□□□ -1.95
SPF1YEL031W TRM3Q07527 1436 aa2.87□□□□□ -1.95
SPF1YEL031W RVB2Q12464 471 aaKnown RBP2.87□□□□□ -1.95
SPF1YEL031W DNF2Q12675 1612 aa2.87□□□□□ -1.95
SPF1YEL031W NAB6Q03735 1134 aaKnown RBP RIP-Chip data2.87□□□□□ -1.95not detected
SPF1YEL031W RAD9P14737 1309 aa2.86□□□□□ -1.95
SPF1YEL031W OXP1P28273 1286 aa2.86□□□□□ -1.95
SPF1YEL031W ESL2P36168 1195 aa2.86□□□□□ -1.95
SPF1YEL031W NUP157P40064 1391 aaKnown RBP2.86□□□□□ -1.95
SPF1YEL031W PLP2Q12017 286 aa2.86□□□□□ -1.95
SPF1YEL031W NMD2P38798 1089 aaKnown RBP2.85□□□□□ -1.95
SPF1YEL031W YDL144CQ07589 356 aa2.85□□□□□ -1.95
SPF1YEL031W CTR9P89105 1077 aa2.85□□□□□ -1.95
SPF1YEL031W RNT1Q02555 471 aa2.85□□□□□ -1.95
SPF1YEL031W LCD1Q04377 747 aa2.85□□□□□ -1.95
SPF1YEL031W VPS60Q03390 229 aa2.84□□□□□ -1.95
SPF1YEL031W MAK21Q12176 1025 aaKnown RBP2.84□□□□□ -1.95
SPF1YEL031W RTC1Q08281 1341 aa2.84□□□□□ -1.95
SPF1YEL031W YSP2Q06681 1438 aa2.84□□□□□ -1.96
SPF1YEL031W TAF13P11747 167 aa2.84□□□□□ -1.96
SPF1YEL031W NAP1P25293 417 aaKnown RBP2.84□□□□□ -1.96
SPF1YEL031W YPP1P46951 817 aa2.84□□□□□ -1.96
SPF1YEL031W ITC1P53125 1264 aa2.84□□□□□ -1.96
SPF1YEL031W NOP14Q99207 810 aaKnown RBP2.84□□□□□ -1.96
SPF1YEL031W RAV1P47104 1357 aa2.84□□□□□ -1.96
SPF1YEL031W SPC110P32380 944 aa2.83□□□□□ -1.96
SPF1YEL031W MSH4P40965 878 aaPredicted RBP2.83□□□□□ -1.96
SPF1YEL031W YLR271WQ06152 274 aa2.83□□□□□ -1.96
SPF1YEL031W STU2P46675 888 aa2.83□□□□□ -1.96
SPF1YEL031W DJP1P40564 432 aa2.83□□□□□ -1.96
SPF1YEL031W KRI1P42846 591 aaKnown RBP2.83□□□□□ -1.96
SPF1YEL031W HAP5Q02516 242 aa2.83□□□□□ -1.96
SPF1YEL031W HOS3Q02959 697 aaKnown RBP2.83□□□□□ -1.96
SPF1YEL031W ETT1Q08421 412 aaKnown RBP2.83□□□□□ -1.96
SPF1YEL031W SIR4P11978 1358 aa2.83□□□□□ -1.96
SPF1YEL031W ARP8Q12386 881 aaKnown RBP RIP-Chip data2.82□□□□□ -1.96not detected
SPF1YEL031W CBF5P33322 483 aaKnown RBP RIP-Chip data2.82□□□□□ -1.96not detected
SPF1YEL031W MIC60P36112 540 aa2.82□□□□□ -1.96
SPF1YEL031W RKM3P38222 552 aa2.82□□□□□ -1.96
SPF1YEL031W DMA2P53924 522 aa2.82□□□□□ -1.96
SPF1YEL031W YOR093CQ12275 1648 aa2.82□□□□□ -1.96
SPF1YEL031W HOP09932 586 aa2.82□□□□□ -1.96
SPF1YEL031W CKB1P43639 278 aa2.82□□□□□ -1.96
SPF1YEL031W TEA1P47988 759 aa2.82□□□□□ -1.96
SPF1YEL031W LTV1P34078 463 aa2.81□□□□□ -1.96
SPF1YEL031W RSM25P40496 264 aa2.81□□□□□ -1.96
SPF1YEL031W CIN4P39110 191 aa2.81□□□□□ -1.96
SPF1YEL031W KIP3P53086 805 aaKnown RBP2.81□□□□□ -1.96
SPF1YEL031W ORC1P54784 914 aaPredicted RBP2.81□□□□□ -1.96
SPF1YEL031W SPT2P06843 333 aaPredicted RBP2.81□□□□□ -1.96
SPF1YEL031W SRS2P12954 1174 aa2.81□□□□□ -1.96
SPF1YEL031W SUI2P20459 304 aaKnown RBP2.81□□□□□ -1.96
SPF1YEL031W DEP1P31385 405 aa2.81□□□□□ -1.96
SPF1YEL031W CEP3P40969 608 aa2.81□□□□□ -1.96
SPF1YEL031W LTE1P07866 1435 aa2.8□□□□□ -1.96
SPF1YEL031W KEX1P09620 729 aa2.8□□□□□ -1.96
SPF1YEL031W CLB1P24868 471 aa2.8□□□□□ -1.96
SPF1YEL031W DSN1P40568 576 aa2.8□□□□□ -1.96
SPF1YEL031W TAN1P53072 289 aaPredicted RBP2.8□□□□□ -1.96
SPF1YEL031W PRP3Q03338 469 aaPredicted RBP2.8□□□□□ -1.96
SPF1YEL031W SWI3P32591 825 aa2.8□□□□□ -1.96
SPF1YEL031W PBY1P38254 753 aa2.8□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms