RNA–Protein interactions for RNA: YDR206W

EBS1, Transcript of Protein involved in translation inhibition and nonsense-mediated decay, yeast

Gene EBS1, Length 2,655 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
EBS1	YDR206W	YPR109W	Q06104	294 aa		4.93	□□□□□ -1.62
EBS1	YDR206W	MPH3	P0CE00	602 aa		4.92	□□□□□ -1.62
EBS1	YDR206W	TPS3	P38426	1054 aa	Known RBP	4.92	□□□□□ -1.62
EBS1	YDR206W	AI4	P03878	556 aa		4.92	□□□□□ -1.62
EBS1	YDR206W	ARG8	P18544	423 aa		4.92	□□□□□ -1.62
EBS1	YDR206W	SLI15	P38283	698 aa		4.92	□□□□□ -1.62
EBS1	YDR206W	YMR196W	Q04336	1088 aa		4.92	□□□□□ -1.62
EBS1	YDR206W	YTA7	P40340	1379 aa		4.91	□□□□□ -1.62
EBS1	YDR206W	TRL1	P09880	827 aa	Known RBP	4.91	□□□□□ -1.62
EBS1	YDR206W	ATE1	P16639	503 aa		4.91	□□□□□ -1.62
EBS1	YDR206W	SPT5	P27692	1063 aa	Known RBP	4.91	□□□□□ -1.62
EBS1	YDR206W	YBL113C	Q7M4S9	792 aa		4.91	□□□□□ -1.62
EBS1	YDR206W	ERP5	P38819	212 aa		4.9	□□□□□ -1.62
EBS1	YDR206W	CSC1	Q06538	782 aa		4.9	□□□□□ -1.62
EBS1	YDR206W	STM1	P39015	273 aa	Known RBP	4.89	□□□□□ -1.63
EBS1	YDR206W	MSC6	Q08818	692 aa	Known RBP	4.89	□□□□□ -1.63
EBS1	YDR206W	WHI5	Q12416	295 aa		4.89	□□□□□ -1.63
EBS1	YDR206W	DCW1	P36091	449 aa		4.89	□□□□□ -1.63
EBS1	YDR206W	ECM23	Q02710	187 aa		4.89	□□□□□ -1.63
EBS1	YDR206W	CDC73	Q06697	393 aa		4.88	□□□□□ -1.63
EBS1	YDR206W	MDJ2	P42834	146 aa		4.88	□□□□□ -1.63
EBS1	YDR206W	ITT1	Q04638	464 aa		4.87	□□□□□ -1.63
EBS1	YDR206W	MST1	P07236	462 aa		4.87	□□□□□ -1.63
EBS1	YDR206W	CWC15	Q03772	175 aa	Known RBP	4.87	□□□□□ -1.63
EBS1	YDR206W	TGL3	P40308	642 aa		4.86	□□□□□ -1.63
EBS1	YDR206W	DAN4	P47179	1161 aa		4.86	□□□□□ -1.63
EBS1	YDR206W	STB3	Q12427	513 aa		4.86	□□□□□ -1.63
EBS1	YDR206W	TFB4	Q12004	338 aa		4.86	□□□□□ -1.63
EBS1	YDR206W	SEC20	P28791	383 aa		4.85	□□□□□ -1.63
EBS1	YDR206W	SPC42	P36094	363 aa		4.85	□□□□□ -1.63
EBS1	YDR206W	YHL050C	P38721	697 aa		4.85	□□□□□ -1.63
EBS1	YDR206W	YHR219W	P38900	624 aa		4.85	□□□□□ -1.63
EBS1	YDR206W	NAF1	P53919	492 aa	Known RBP	4.85	□□□□□ -1.63
EBS1	YDR206W	LAM6	Q08001	693 aa		4.85	□□□□□ -1.63
EBS1	YDR206W	YOL036W	Q08206	761 aa		4.85	□□□□□ -1.63
EBS1	YDR206W	MCM16	Q12262	181 aa		4.85	□□□□□ -1.63
EBS1	YDR206W	YEL077C	Q3E7X8	1277 aa		4.85	□□□□□ -1.63
EBS1	YDR206W	GAL2	P13181	574 aa		4.85	□□□□□ -1.63
EBS1	YDR206W	SLY41	P22215	453 aa		4.85	□□□□□ -1.63
EBS1	YDR206W	ASF1	P32447	279 aa		4.85	□□□□□ -1.63
EBS1	YDR206W	KTR7	P40504	517 aa		4.84	□□□□□ -1.63
EBS1	YDR206W	TUM1	Q08686	304 aa	Known RBP	4.84	□□□□□ -1.63
EBS1	YDR206W	TRM1	P15565	570 aa	Known RBP	4.84	□□□□□ -1.63
EBS1	YDR206W	UBX7	P38349	436 aa		4.84	□□□□□ -1.63
EBS1	YDR206W	TIF4632	P39936	914 aa	Known RBP	4.84	□□□□□ -1.63
EBS1	YDR206W	DOS2	P54858	310 aa		4.84	□□□□□ -1.63
EBS1	YDR206W	ISF1	P32488	338 aa		4.83	□□□□□ -1.64
EBS1	YDR206W	POL32	P47110	350 aa		4.83	□□□□□ -1.64
EBS1	YDR206W	HTA1	P04911	132 aa	Known RBP	4.82	□□□□□ -1.64
EBS1	YDR206W	HTA2	P04912	132 aa		4.82	□□□□□ -1.64
EBS1	YDR206W	PPX1	P38698	397 aa		4.82	□□□□□ -1.64
EBS1	YDR206W	BOL3	P39724	118 aa		4.82	□□□□□ -1.64
EBS1	YDR206W	YNL115C	P53925	644 aa		4.82	□□□□□ -1.64
EBS1	YDR206W	MAG2	Q06436	670 aa	Known RBP	4.82	□□□□□ -1.64
EBS1	YDR206W	SET4	P42948	560 aa		4.82	□□□□□ -1.64
EBS1	YDR206W	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	4.81	□□□□□ -1.64	not detected
EBS1	YDR206W	ALD4	P46367	519 aa	Known RBP	4.81	□□□□□ -1.64
EBS1	YDR206W	YPP1	P46951	817 aa		4.81	□□□□□ -1.64
EBS1	YDR206W	RTF1	P53064	558 aa		4.81	□□□□□ -1.64
EBS1	YDR206W	FAR11	P53917	953 aa		4.81	□□□□□ -1.64
EBS1	YDR206W	KAR5	Q04746	504 aa		4.81	□□□□□ -1.64
EBS1	YDR206W	YEL023C	P39992	682 aa		4.81	□□□□□ -1.64
EBS1	YDR206W	ERF2	Q06551	359 aa		4.81	□□□□□ -1.64
EBS1	YDR206W	SEC8	P32855	1065 aa		4.8	□□□□□ -1.64
EBS1	YDR206W	BRN1	P38170	754 aa		4.8	□□□□□ -1.64
EBS1	YDR206W	ROM1	P53046	1155 aa		4.8	□□□□□ -1.64
EBS1	YDR206W	FRT1	Q99332	602 aa		4.8	□□□□□ -1.64
EBS1	YDR206W	GRS1	P38088	690 aa	Known RBP	4.79	□□□□□ -1.64
EBS1	YDR206W	EMP47	P43555	445 aa		4.79	□□□□□ -1.64
EBS1	YDR206W	APL6	P46682	809 aa		4.79	□□□□□ -1.64
EBS1	YDR206W	CST6	P40535	587 aa		4.79	□□□□□ -1.64
EBS1	YDR206W	YJR107W	P47145	328 aa		4.79	□□□□□ -1.64
EBS1	YDR206W	PUF6	Q04373	656 aa	Known RBP	4.79	□□□□□ -1.64
EBS1	YDR206W	YPR084W	Q06821	456 aa		4.79	□□□□□ -1.64
EBS1	YDR206W	MET4	P32389	672 aa		4.79	□□□□□ -1.64
EBS1	YDR206W	ATG36	P46983	293 aa		4.79	□□□□□ -1.64
EBS1	YDR206W	ATG1	P53104	897 aa		4.79	□□□□□ -1.64
EBS1	YDR206W	SVF1	Q05515	481 aa		4.79	□□□□□ -1.64
EBS1	YDR206W	ACS2	P52910	683 aa	Known RBP	4.78	□□□□□ -1.64
EBS1	YDR206W	PUS6	P53294	404 aa		4.78	□□□□□ -1.64
EBS1	YDR206W	OYE2	Q03558	400 aa	Known RBP	4.78	□□□□□ -1.64
EBS1	YDR206W	KEX2	P13134	814 aa		4.78	□□□□□ -1.64
EBS1	YDR206W	AGE1	Q04412	482 aa		4.77	□□□□□ -1.65
EBS1	YDR206W	PNP1	Q05788	311 aa		4.77	□□□□□ -1.65
EBS1	YDR206W	NUT2	Q06213	157 aa		4.77	□□□□□ -1.65
EBS1	YDR206W	YRR1	Q12172	810 aa		4.77	□□□□□ -1.65
EBS1	YDR206W	RPP1B	P10622	106 aa	Known RBP	4.77	□□□□□ -1.65
EBS1	YDR206W	PHO87	P25360	923 aa		4.76	□□□□□ -1.65
EBS1	YDR206W	FRA1	Q07825	749 aa		4.76	□□□□□ -1.65
EBS1	YDR206W	NNF1	P47149	201 aa		4.76	□□□□□ -1.65
EBS1	YDR206W	FPR4	Q06205	392 aa	Predicted RBP	4.76	□□□□□ -1.65
EBS1	YDR206W	PTC4	P38089	393 aa		4.75	□□□□□ -1.65
EBS1	YDR206W	PEX21	P50091	288 aa		4.75	□□□□□ -1.65
EBS1	YDR206W	ENV9	Q08651	330 aa		4.75	□□□□□ -1.65
EBS1	YDR206W	MET1	P36150	593 aa		4.75	□□□□□ -1.65
EBS1	YDR206W	YAF9	P53930	226 aa		4.75	□□□□□ -1.65
EBS1	YDR206W	QDR1	P40475	563 aa		4.74	□□□□□ -1.65
EBS1	YDR206W	MID1	P41821	548 aa		4.74	□□□□□ -1.65
EBS1	YDR206W	TUB4	P53378	473 aa		4.74	□□□□□ -1.65
EBS1	YDR206W	DPL1	Q05567	589 aa		4.74	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 9.9 ms