RNA–Protein interactions for RNA: YDR084C

TVP23, Transcript of Integral membrane protein, yeast

Gene TVP23, Length 600 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TVP23	YDR084C	RAD9	P14737	1309 aa		11.84	□□□□□ -0.51
TVP23	YDR084C	KRE5	P22023	1365 aa		11.82	□□□□□ -0.52
TVP23	YDR084C	POL5	P39985	1022 aa	Known RBP	11.82	□□□□□ -0.52
TVP23	YDR084C	RIA1	P53893	1110 aa		11.82	□□□□□ -0.52
TVP23	YDR084C	NUP192	P47054	1683 aa		11.78	□□□□□ -0.52
TVP23	YDR084C	BCK1	Q01389	1478 aa		11.78	□□□□□ -0.52
TVP23	YDR084C	YFR006W	P43590	535 aa		11.78	□□□□□ -0.52
TVP23	YDR084C	KIP3	P53086	805 aa	Known RBP	11.78	□□□□□ -0.52
TVP23	YDR084C	TAF8	Q03750	510 aa		11.78	□□□□□ -0.52
TVP23	YDR084C	NAP1	P25293	417 aa	Known RBP	11.77	□□□□□ -0.53
TVP23	YDR084C	YMR196W	Q04336	1088 aa		11.76	□□□□□ -0.53
TVP23	YDR084C	SCY1	P53009	804 aa		11.75	□□□□□ -0.53
TVP23	YDR084C	PTP3	P40048	928 aa		11.73	□□□□□ -0.53
TVP23	YDR084C	CFT1	Q06632	1357 aa	Known RBP	11.72	□□□□□ -0.53
TVP23	YDR084C	SPE2	P21182	396 aa		11.72	□□□□□ -0.53
TVP23	YDR084C	THI12	P42883	340 aa		11.71	□□□□□ -0.53
TVP23	YDR084C	THI5	P43534	340 aa		11.71	□□□□□ -0.53
TVP23	YDR084C	THI11	P47183	340 aa		11.71	□□□□□ -0.53
TVP23	YDR084C	THI13	Q07748	340 aa		11.71	□□□□□ -0.53
TVP23	YDR084C	TY3B-I	Q7LHG5	1498 aa	Known RBP	11.7	□□□□□ -0.54
TVP23	YDR084C	BUD31	P25337	157 aa	Predicted RBP	11.7	□□□□□ -0.54
TVP23	YDR084C	YNR029C	P53729	429 aa	Known RBP	11.7	□□□□□ -0.54
TVP23	YDR084C	USO1	P25386	1790 aa		11.68	□□□□□ -0.54
TVP23	YDR084C	TY1B-NL2	Q99337	1749 aa	Known RBP	11.68	□□□□□ -0.54
TVP23	YDR084C	BCH2	P36122	765 aa		11.66	□□□□□ -0.54
TVP23	YDR084C	SCT1	P32784	759 aa		11.65	□□□□□ -0.54
TVP23	YDR084C	YLR419W	Q06698	1435 aa	Known RBP	11.64	□□□□□ -0.55
TVP23	YDR084C	CHZ1	P40019	153 aa	Predicted RBP	11.63	□□□□□ -0.55
TVP23	YDR084C	RCM1	P53972	490 aa		11.62	□□□□□ -0.55
TVP23	YDR084C	MHP1	P43638	1398 aa		11.57	□□□□□ -0.56
TVP23	YDR084C	PPH3	P32345	308 aa		11.56	□□□□□ -0.56
TVP23	YDR084C	SLX5	P32828	619 aa	Known RBP	11.56	□□□□□ -0.56
TVP23	YDR084C	CPS1	P27614	576 aa		11.55	□□□□□ -0.56
TVP23	YDR084C	PDS5	Q04264	1277 aa		11.54	□□□□□ -0.56
TVP23	YDR084C	PSK1	P31374	1356 aa		11.5	□□□□□ -0.57
TVP23	YDR084C	OXP1	P28273	1286 aa		11.49	□□□□□ -0.57
TVP23	YDR084C	RTG3	P38165	486 aa		11.49	□□□□□ -0.57
TVP23	YDR084C	TIF4632	P39936	914 aa	Known RBP	11.48	□□□□□ -0.57
TVP23	YDR084C	TGL3	P40308	642 aa		11.48	□□□□□ -0.57
TVP23	YDR084C	FKH1	P40466	484 aa		11.48	□□□□□ -0.57
TVP23	YDR084C	LEU2	P04173	364 aa	Predicted RBP	11.46	□□□□□ -0.57
TVP23	YDR084C	SEC3	P33332	1336 aa	Known RBP	11.44	□□□□□ -0.58
TVP23	YDR084C	SPT7	P35177	1332 aa		11.43	□□□□□ -0.58
TVP23	YDR084C	SSP1	P38871	571 aa		11.43	□□□□□ -0.58
TVP23	YDR084C	PSD2	P53037	1138 aa	Known RBP	11.43	□□□□□ -0.58
TVP23	YDR084C	LEU3	P08638	886 aa		11.42	□□□□□ -0.58
TVP23	YDR084C	MTR4	P47047	1073 aa	Known RBP	11.41	□□□□□ -0.58
TVP23	YDR084C	YML133C	Q03099	1374 aa		11.41	□□□□□ -0.58
TVP23	YDR084C	YLL067C	Q07888	1374 aa		11.41	□□□□□ -0.58
TVP23	YDR084C	YLL066C	Q99208	1374 aa		11.41	□□□□□ -0.58
TVP23	YDR084C	CSE4	P36012	229 aa		11.4	□□□□□ -0.58
TVP23	YDR084C	RPS24A	P0CX31	135 aa	Known RBP	11.38	□□□□□ -0.59
TVP23	YDR084C	RPS24B	P0CX32	135 aa	Known RBP	11.38	□□□□□ -0.59
TVP23	YDR084C	NST1	P53935	1240 aa		11.37	□□□□□ -0.59
TVP23	YDR084C	PRP45	P28004	379 aa	Predicted RBP	11.36	□□□□□ -0.59
TVP23	YDR084C	ADE6	P38972	1358 aa	Known RBP	11.36	□□□□□ -0.59
TVP23	YDR084C	PRP43	P53131	767 aa	Known RBP	11.35	□□□□□ -0.59
TVP23	YDR084C	PDI1	P17967	522 aa	Known RBP	11.33	□□□□□ -0.6
TVP23	YDR084C	PRP5	P21372	849 aa	Predicted RBP	11.33	□□□□□ -0.6
TVP23	YDR084C	RTF1	P53064	558 aa		11.33	□□□□□ -0.6
TVP23	YDR084C	EPS1	P40557	701 aa		11.31	□□□□□ -0.6
TVP23	YDR084C	APP1	P53933	587 aa		11.3	□□□□□ -0.6
TVP23	YDR084C	GAS4	Q08271	471 aa		11.3	□□□□□ -0.6
TVP23	YDR084C	ENT1	Q12518	454 aa		11.3	□□□□□ -0.6
TVP23	YDR084C	BDF1	P35817	686 aa		11.29	□□□□□ -0.6
TVP23	YDR084C	TAP42	Q04372	366 aa		11.29	□□□□□ -0.6
TVP23	YDR084C	YAH1	Q12184	172 aa	Known RBP	11.29	□□□□□ -0.6
TVP23	YDR084C	MLP1	Q02455	1875 aa	Known RBP	11.29	□□□□□ -0.6
TVP23	YDR084C	YEF3	P16521	1044 aa	Known RBP	11.28	□□□□□ -0.6
TVP23	YDR084C	HIM1	Q06674	414 aa		11.28	□□□□□ -0.6
TVP23	YDR084C	DPS1	P04802	557 aa	Known RBP	11.27	□□□□□ -0.61
TVP23	YDR084C	TRK1	P12685	1235 aa		11.27	□□□□□ -0.61
TVP23	YDR084C	KAR2	P16474	682 aa	Known RBP	11.27	□□□□□ -0.61
TVP23	YDR084C	GRX4	P32642	244 aa		11.26	□□□□□ -0.61
TVP23	YDR084C	ENP1	P38333	483 aa	Known RBP	11.25	□□□□□ -0.61
TVP23	YDR084C	MSB3	P48566	633 aa	Predicted RBP	11.25	□□□□□ -0.61
TVP23	YDR084C	ENV9	Q08651	330 aa		11.24	□□□□□ -0.61
TVP23	YDR084C	LEO1	P38439	464 aa		11.23	□□□□□ -0.61
TVP23	YDR084C	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	11.23	□□□□□ -0.61	not detected
TVP23	YDR084C	PAP2	P53632	584 aa	Known RBP	11.22	□□□□□ -0.61
TVP23	YDR084C	AUS1	Q08409	1394 aa		11.22	□□□□□ -0.61
TVP23	YDR084C	SLM3	Q12093	417 aa		11.22	□□□□□ -0.61
TVP23	YDR084C	YIL055C	P40523	627 aa	Known RBP	11.21	□□□□□ -0.61
TVP23	YDR084C	TCB1	Q12466	1186 aa		11.21	□□□□□ -0.61
TVP23	YDR084C	TY4B-H	P0C2J7	1802 aa		11.2	□□□□□ -0.62
TVP23	YDR084C	TY4B-J	P47024	1803 aa		11.2	□□□□□ -0.62
TVP23	YDR084C	RRP5	Q05022	1729 aa	Known RBP	11.18	□□□□□ -0.62
TVP23	YDR084C	UBP9	P39967	754 aa		11.17	□□□□□ -0.62
TVP23	YDR084C	NSR1	P27476	414 aa	Known RBP RIP-Chip data	11.16	□□□□□ -0.62	not detected
TVP23	YDR084C	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	11.15	□□□□□ -0.62	not detected
TVP23	YDR084C	XKS1	P42826	600 aa		11.15	□□□□□ -0.62
TVP23	YDR084C	IMH1	Q06704	911 aa	Known RBP	11.15	□□□□□ -0.62
TVP23	YDR084C	IES2	P40154	320 aa		11.13	□□□□□ -0.63
TVP23	YDR084C	RPO41	P13433	1351 aa	Known RBP	11.13	□□□□□ -0.63
TVP23	YDR084C	RTR1	P40084	226 aa	Predicted RBP	11.12	□□□□□ -0.63
TVP23	YDR084C	RRP46	P53256	223 aa	Predicted RBP	11.12	□□□□□ -0.63
TVP23	YDR084C	IOC4	Q04213	475 aa		11.11	□□□□□ -0.63
TVP23	YDR084C	RSF2	P46974	1380 aa		11.11	□□□□□ -0.63
TVP23	YDR084C	SIS1	P25294	352 aa	Known RBP	11.1	□□□□□ -0.63
TVP23	YDR084C	YRF1-2	P40105	1681 aa		11.1	□□□□□ -0.63

Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms