RNA–Protein interactions for RNA: YDL164C

CDC9, Transcript of DNA ligase found in the nucleus and mitochondria, yeastyeast

Gene CDC9, Length 2,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC9YDL164C FPR4Q06205 392 aaPredicted RBP5.77□□□□□ -1.49
CDC9YDL164C SCJ1P25303 377 aa5.77□□□□□ -1.49
CDC9YDL164C ORC6P38826 435 aa5.77□□□□□ -1.49
CDC9YDL164C RPL34BP40525 121 aaKnown RBP5.77□□□□□ -1.49
CDC9YDL164C YAP5P40574 245 aa5.77□□□□□ -1.49
CDC9YDL164C NIS1P53939 407 aa5.77□□□□□ -1.49
CDC9YDL164C YOR238WQ08634 303 aa5.77□□□□□ -1.49
CDC9YDL164C CIT2P08679 460 aa5.76□□□□□ -1.49
CDC9YDL164C PDR1P12383 1068 aa5.76□□□□□ -1.49
CDC9YDL164C DBP1P24784 617 aaKnown RBP5.76□□□□□ -1.49
CDC9YDL164C RAD59Q12223 238 aa5.76□□□□□ -1.49
CDC9YDL164C SEC8P32855 1065 aa5.76□□□□□ -1.49
CDC9YDL164C STM1P39015 273 aaKnown RBP5.75□□□□□ -1.49
CDC9YDL164C POL32P47110 350 aa5.75□□□□□ -1.49
CDC9YDL164C YJU3P28321 313 aa5.74□□□□□ -1.49
CDC9YDL164C YHL050CP38721 697 aa5.74□□□□□ -1.49
CDC9YDL164C YHR219WP38900 624 aa5.74□□□□□ -1.49
CDC9YDL164C MDG1P53885 366 aa5.74□□□□□ -1.49
CDC9YDL164C GIN4Q12263 1142 aa5.74□□□□□ -1.49
CDC9YDL164C YOL098CQ12496 1037 aa5.74□□□□□ -1.49
CDC9YDL164C YEL077CQ3E7X8 1277 aa5.74□□□□□ -1.49
CDC9YDL164C OSW7P43611 510 aa5.74□□□□□ -1.49
CDC9YDL164C NNF1P47149 201 aa5.74□□□□□ -1.49
CDC9YDL164C RGR1P19263 1082 aa5.73□□□□□ -1.49
CDC9YDL164C TOM20P35180 183 aa5.73□□□□□ -1.49
CDC9YDL164C SOL3P38858 249 aa5.73□□□□□ -1.49
CDC9YDL164C MST1P07236 462 aa5.73□□□□□ -1.49
CDC9YDL164C RSC30P38781 883 aa5.73□□□□□ -1.49
CDC9YDL164C PMC1P38929 1173 aaPredicted RBP5.73□□□□□ -1.49
CDC9YDL164C TEA1P47988 759 aa5.73□□□□□ -1.49
CDC9YDL164C ESS1P22696 170 aa5.72□□□□□ -1.49
CDC9YDL164C FPK1P53739 893 aa5.72□□□□□ -1.49
CDC9YDL164C ALD3P54114 506 aa5.72□□□□□ -1.49
CDC9YDL164C OYE2Q03558 400 aaKnown RBP5.72□□□□□ -1.49
CDC9YDL164C ASF1P32447 279 aa5.71□□□□□ -1.5
CDC9YDL164C CSE4P36012 229 aa5.71□□□□□ -1.5
CDC9YDL164C BUD6P41697 788 aa5.71□□□□□ -1.5
CDC9YDL164C CWC15Q03772 175 aaKnown RBP5.71□□□□□ -1.5
CDC9YDL164C YJR107WP47145 328 aa5.71□□□□□ -1.5
CDC9YDL164C HST2P53686 357 aa5.71□□□□□ -1.5
CDC9YDL164C ECM23Q02710 187 aa5.71□□□□□ -1.5
CDC9YDL164C FRT1Q99332 602 aa5.71□□□□□ -1.5
CDC9YDL164C SEC20P28791 383 aa5.7□□□□□ -1.5
CDC9YDL164C MET4P32389 672 aa5.7□□□□□ -1.5
CDC9YDL164C ALG12P53730 551 aa5.7□□□□□ -1.5
CDC9YDL164C TSR4P25040 408 aa5.69□□□□□ -1.5
CDC9YDL164C GRX4P32642 244 aa5.69□□□□□ -1.5
CDC9YDL164C NST1P53935 1240 aa5.69□□□□□ -1.5
CDC9YDL164C MNL2Q12205 849 aa5.69□□□□□ -1.5
CDC9YDL164C GAP1P19145 602 aaPredicted RBP5.68□□□□□ -1.5
CDC9YDL164C MET1P36150 593 aa5.68□□□□□ -1.5
CDC9YDL164C PPX1P38698 397 aa5.68□□□□□ -1.5
CDC9YDL164C BOL3P39724 118 aa5.68□□□□□ -1.5
CDC9YDL164C PKH3Q03306 898 aaPredicted RBP5.68□□□□□ -1.5
CDC9YDL164C PIB1Q06651 286 aa5.68□□□□□ -1.5
CDC9YDL164C TAT2P38967 592 aa5.68□□□□□ -1.5
CDC9YDL164C VAC8P39968 578 aa5.68□□□□□ -1.5
CDC9YDL164C FYV10P40492 516 aa5.68□□□□□ -1.5
CDC9YDL164C ZDS1P50111 915 aaKnown RBP5.68□□□□□ -1.5
CDC9YDL164C SVF1Q05515 481 aa5.68□□□□□ -1.5
CDC9YDL164C JIP5Q06214 492 aaPredicted RBP5.68□□□□□ -1.5
CDC9YDL164C MVP1P40959 511 aaKnown RBP5.67□□□□□ -1.5
CDC9YDL164C MAK16P10962 306 aaPredicted RBP5.67□□□□□ -1.5
CDC9YDL164C VPS72Q03388 795 aa5.67□□□□□ -1.5
CDC9YDL164C VMA1P17255 1071 aaKnown RBP5.66□□□□□ -1.5
CDC9YDL164C ENP1P38333 483 aaKnown RBP5.66□□□□□ -1.5
CDC9YDL164C YGR273CP53329 174 aa5.66□□□□□ -1.5
CDC9YDL164C SUB1P54000 292 aaKnown RBP5.66□□□□□ -1.5
CDC9YDL164C MTO1P53070 669 aa5.65□□□□□ -1.5
CDC9YDL164C YOL057WQ08225 711 aa5.65□□□□□ -1.5
CDC9YDL164C GRS1P38088 690 aaKnown RBP5.64□□□□□ -1.51
CDC9YDL164C SIS2P36024 562 aa5.64□□□□□ -1.51
CDC9YDL164C ALD6P54115 500 aaKnown RBP5.64□□□□□ -1.51
CDC9YDL164C RPN4Q03465 531 aa5.64□□□□□ -1.51
CDC9YDL164C SSF2Q12153 453 aaPredicted RBP5.64□□□□□ -1.51
CDC9YDL164C SVL3Q03088 825 aaKnown RBP5.63□□□□□ -1.51
CDC9YDL164C KAR5Q04746 504 aa5.63□□□□□ -1.51
CDC9YDL164C NUT2Q06213 157 aa5.63□□□□□ -1.51
CDC9YDL164C GPI13Q07830 1017 aa5.63□□□□□ -1.51
CDC9YDL164C MMP1Q12372 583 aa5.63□□□□□ -1.51
CDC9YDL164C SIT4P20604 311 aa5.63□□□□□ -1.51
CDC9YDL164C UBX7P38349 436 aa5.63□□□□□ -1.51
CDC9YDL164C PPG1P32838 368 aa5.62□□□□□ -1.51
CDC9YDL164C SPR28Q04921 423 aa5.62□□□□□ -1.51
CDC9YDL164C GAL2P13181 574 aa5.62□□□□□ -1.51
CDC9YDL164C KTR7P40504 517 aa5.62□□□□□ -1.51
CDC9YDL164C VPS16Q03308 798 aa5.62□□□□□ -1.51
CDC9YDL164C PUF6Q04373 656 aaKnown RBP5.62□□□□□ -1.51
CDC9YDL164C SAM3Q08986 587 aa5.62□□□□□ -1.51
CDC9YDL164C RAD54P32863 898 aa5.61□□□□□ -1.51
CDC9YDL164C ISW1P38144 1129 aa5.61□□□□□ -1.51
CDC9YDL164C TPM2P40414 161 aa5.61□□□□□ -1.51
CDC9YDL164C SSB1P11484 613 aaKnown RBP5.6□□□□□ -1.51
CDC9YDL164C RPA135P22138 1203 aaKnown RBP5.6□□□□□ -1.51
CDC9YDL164C SSD1P24276 1250 aaKnown RBP RIP-Chip data5.6□□□□□ -1.51not detected
CDC9YDL164C SSB2P40150 613 aaKnown RBP5.6□□□□□ -1.51
CDC9YDL164C NSE3Q05541 303 aa5.6□□□□□ -1.51
CDC9YDL164C PBP2P38151 413 aaKnown RBP RIP-Chip data5.6□□□□□ -1.51not detected
CDC9YDL164C ILV3P39522 585 aaKnown RBP5.6□□□□□ -1.51
CDC9YDL164C YJR142WP47173 342 aa5.6□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 31.5 ms