RNA–Protein interactions for RNA: YBR275C

RIF1, Transcript of Protein that binds to the Rap1p C-terminus, yeastyeast

Gene RIF1, Length 5,751 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RIF1YBR275C MPC54Q08550 464 aa3.42□□□□□ -1.86
RIF1YBR275C TY1B-AO13527 1196 aaKnown RBP3.42□□□□□ -1.86
RIF1YBR275C GPT2P36148 743 aa3.42□□□□□ -1.86
RIF1YBR275C SAS4Q04003 481 aa3.42□□□□□ -1.86
RIF1YBR275C MSM1P22438 575 aa3.42□□□□□ -1.86
RIF1YBR275C JJJ1P53863 590 aa3.42□□□□□ -1.86
RIF1YBR275C MCM1P11746 286 aa3.42□□□□□ -1.86
RIF1YBR275C PRP5P21372 849 aaPredicted RBP3.42□□□□□ -1.86
RIF1YBR275C NCB2Q92317 146 aa3.42□□□□□ -1.86
RIF1YBR275C SPT2P06843 333 aaPredicted RBP3.41□□□□□ -1.86
RIF1YBR275C SRS2P12954 1174 aa3.41□□□□□ -1.86
RIF1YBR275C PHO87P25360 923 aa3.41□□□□□ -1.86
RIF1YBR275C PSE1P32337 1089 aaKnown RBP3.41□□□□□ -1.86
RIF1YBR275C RTG3P38165 486 aa3.41□□□□□ -1.86
RIF1YBR275C ACF4P47129 309 aa3.41□□□□□ -1.86
RIF1YBR275C PUF6Q04373 656 aaKnown RBP3.41□□□□□ -1.86
RIF1YBR275C SEM1O94742 89 aa3.41□□□□□ -1.86
RIF1YBR275C HXT16P47185 567 aa3.41□□□□□ -1.86
RIF1YBR275C BUG1Q12191 341 aa3.41□□□□□ -1.86
RIF1YBR275C FUS1P11710 512 aa3.41□□□□□ -1.86
RIF1YBR275C PEX21P50091 288 aa3.41□□□□□ -1.86
RIF1YBR275C GIR2Q03768 265 aaPredicted RBP3.41□□□□□ -1.86
RIF1YBR275C YER156CP40093 338 aaKnown RBP3.41□□□□□ -1.86
RIF1YBR275C YMR265CQ03508 461 aaKnown RBP3.41□□□□□ -1.86
RIF1YBR275C GAL2P13181 574 aa3.4□□□□□ -1.86
RIF1YBR275C OXP1P28273 1286 aa3.4□□□□□ -1.86
RIF1YBR275C PRP9P19736 530 aaKnown RBP3.4□□□□□ -1.86
RIF1YBR275C JIP3O13555 125 aa3.4□□□□□ -1.87
RIF1YBR275C IDI1P15496 288 aa3.4□□□□□ -1.87
RIF1YBR275C HXT5P38695 592 aa3.4□□□□□ -1.87
RIF1YBR275C AOS1Q06624 347 aa3.4□□□□□ -1.87
RIF1YBR275C SSF2Q12153 453 aaPredicted RBP3.4□□□□□ -1.87
RIF1YBR275C FUN30P31380 1131 aa3.4□□□□□ -1.87
RIF1YBR275C MSC7P38694 644 aa3.4□□□□□ -1.87
RIF1YBR275C IMP4P53941 290 aaKnown RBP3.4□□□□□ -1.87
RIF1YBR275C CWC21Q03375 135 aaKnown RBP3.4□□□□□ -1.87
RIF1YBR275C NBL1Q3E7Y6 73 aa3.4□□□□□ -1.87
RIF1YBR275C LDH1P38139 375 aa3.39□□□□□ -1.87
RIF1YBR275C BRE2P43132 505 aa3.39□□□□□ -1.87
RIF1YBR275C CRF1Q04930 467 aa3.39□□□□□ -1.87
RIF1YBR275C ARP7Q12406 477 aa3.39□□□□□ -1.87
RIF1YBR275C RPS9BP05755 195 aaKnown RBP3.39□□□□□ -1.87
RIF1YBR275C MUM2P38236 366 aa3.39□□□□□ -1.87
RIF1YBR275C STM1P39015 273 aaKnown RBP3.39□□□□□ -1.87
RIF1YBR275C VTC4P47075 721 aa3.39□□□□□ -1.87
RIF1YBR275C MSN5P52918 1224 aa3.39□□□□□ -1.87
RIF1YBR275C CBF2P32504 956 aa3.39□□□□□ -1.87
RIF1YBR275C OSH2Q12451 1283 aa3.39□□□□□ -1.87
RIF1YBR275C LIF1P53150 421 aa3.39□□□□□ -1.87
RIF1YBR275C DRS2P39524 1355 aa3.39□□□□□ -1.87
RIF1YBR275C CLC1P17891 233 aa3.38□□□□□ -1.87
RIF1YBR275C TAF10Q12030 206 aa3.38□□□□□ -1.87
RIF1YBR275C IRE1P32361 1115 aa3.38□□□□□ -1.87
RIF1YBR275C ELM1P32801 640 aa3.38□□□□□ -1.87
RIF1YBR275C BRL1P38770 471 aa3.38□□□□□ -1.87
RIF1YBR275C IMH1Q06704 911 aaKnown RBP3.38□□□□□ -1.87
RIF1YBR275C SNU66Q12420 587 aaPredicted RBP3.38□□□□□ -1.87
RIF1YBR275C UTP9P38882 575 aaKnown RBP3.38□□□□□ -1.87
RIF1YBR275C YFR016CP43597 1233 aaKnown RBP3.38□□□□□ -1.87
RIF1YBR275C SMC3P47037 1230 aa3.38□□□□□ -1.87
RIF1YBR275C CFT2Q12102 859 aaPredicted RBP3.38□□□□□ -1.87
RIF1YBR275C BSD2P38356 321 aa3.38□□□□□ -1.87
RIF1YBR275C YNG2P38806 282 aaKnown RBP3.38□□□□□ -1.87
RIF1YBR275C CSE4P36012 229 aa3.37□□□□□ -1.87
RIF1YBR275C AIM44Q99299 758 aa3.37□□□□□ -1.87
RIF1YBR275C EAR1Q03212 550 aa3.37□□□□□ -1.87
RIF1YBR275C YLH47Q06493 454 aa3.37□□□□□ -1.87
RIF1YBR275C HSP82P02829 709 aaKnown RBP3.37□□□□□ -1.87
RIF1YBR275C RAD3P06839 778 aa3.37□□□□□ -1.87
RIF1YBR275C YAP5P40574 245 aa3.37□□□□□ -1.87
RIF1YBR275C SGD1Q06132 899 aa3.37□□□□□ -1.87
RIF1YBR275C DAL5P15365 543 aa3.36□□□□□ -1.87
RIF1YBR275C FMO1P38866 432 aa3.36□□□□□ -1.87
RIF1YBR275C RSM25P40496 264 aa3.36□□□□□ -1.87
RIF1YBR275C MDG1P53885 366 aa3.36□□□□□ -1.87
RIF1YBR275C DNM1P54861 757 aa3.36□□□□□ -1.87
RIF1YBR275C NNF1P47149 201 aa3.36□□□□□ -1.87
RIF1YBR275C KRE33P53914 1056 aaKnown RBP3.36□□□□□ -1.87
RIF1YBR275C PRP3Q03338 469 aaPredicted RBP3.36□□□□□ -1.87
RIF1YBR275C MRD1Q06106 887 aaKnown RBP3.36□□□□□ -1.87
RIF1YBR275C RIM20Q12033 661 aa3.36□□□□□ -1.87
RIF1YBR275C STB3Q12427 513 aa3.36□□□□□ -1.87
RIF1YBR275C ZRT2Q12436 422 aa3.36□□□□□ -1.87
RIF1YBR275C FBP1P09201 348 aa3.36□□□□□ -1.87
RIF1YBR275C TBF1Q02457 562 aa3.36□□□□□ -1.87
RIF1YBR275C YDR341CQ05506 607 aaKnown RBP3.36□□□□□ -1.87
RIF1YBR275C TFB4Q12004 338 aa3.36□□□□□ -1.87
RIF1YBR275C MNL2Q12205 849 aa3.36□□□□□ -1.87
RIF1YBR275C RED1P14291 827 aa3.36□□□□□ -1.87
RIF1YBR275C DSN1P40568 576 aa3.36□□□□□ -1.87
RIF1YBR275C ETT1Q08421 412 aaKnown RBP3.36□□□□□ -1.87
RIF1YBR275C BUD14P27637 709 aa3.36□□□□□ -1.87
RIF1YBR275C PAH1P32567 862 aa3.36□□□□□ -1.87
RIF1YBR275C TCA17P32613 152 aa3.36□□□□□ -1.87
RIF1YBR275C NMD2P38798 1089 aaKnown RBP3.36□□□□□ -1.87
RIF1YBR275C MAM3Q12296 706 aa3.36□□□□□ -1.87
RIF1YBR275C CDC19P00549 500 aaKnown RBP3.35□□□□□ -1.87
RIF1YBR275C YEF3P16521 1044 aaKnown RBP3.35□□□□□ -1.87
RIF1YBR275C SEC14P24280 304 aaKnown RBP3.35□□□□□ -1.87
RIF1YBR275C RPN1P38764 993 aaKnown RBP3.35□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 10.1 ms