RNA–Protein interactions for RNA: ENST00000502254.5

PTPN20-212, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-212ENST00000502254 ZNF608Q9ULD9 1512 aaPredicted RBP9.02□□□□□ -0.97
PTPN20-212ENST00000502254 PRKCSHP14314 528 aaPredicted RBP9.02□□□□□ -0.97
PTPN20-212ENST00000502254 GAPVD1Q14C86 1478 aa9.02□□□□□ -0.97
PTPN20-212ENST00000502254 CHRDL2Q6WN34 429 aa9.01□□□□□ -0.97
PTPN20-212ENST00000502254 PIP4P2Q8N4L2 257 aa9.01□□□□□ -0.97
PTPN20-212ENST00000502254 PCDHB8Q9UN66 801 aa9.01□□□□□ -0.97
PTPN20-212ENST00000502254 PCDHB13Q9Y5F0 798 aa9.01□□□□□ -0.97
PTPN20-212ENST00000502254 CARMIL1Q5VZK9 1371 aa8.99□□□□□ -0.97
PTPN20-212ENST00000502254 WDR97A6NE52 1622 aa8.98□□□□□ -0.97
PTPN20-212ENST00000502254 UBTFP17480 764 aaKnown RBP8.98□□□□□ -0.97
PTPN20-212ENST00000502254 PSEN1P49768 467 aa8.98□□□□□ -0.97
PTPN20-212ENST00000502254 KIF12Q96FN5 646 aa8.97□□□□□ -0.97
PTPN20-212ENST00000502254 ABCA5Q8WWZ7 1642 aa8.97□□□□□ -0.97
PTPN20-212ENST00000502254 GRIN2BQ13224 1484 aa8.96□□□□□ -0.97
PTPN20-212ENST00000502254 PAK3O75914 559 aaPredicted RBP8.95□□□□□ -0.98
PTPN20-212ENST00000502254 IFNL1Q8IU54 200 aa8.95□□□□□ -0.98
PTPN20-212ENST00000502254 GOLGA3Q08378 1498 aa8.95□□□□□ -0.98
PTPN20-212ENST00000502254 PRXQ9BXM0 1461 aa8.95□□□□□ -0.98
PTPN20-212ENST00000502254 RAPGEF2Q9Y4G8 1499 aa8.95□□□□□ -0.98
PTPN20-212ENST00000502254 EIF4G3O43432 1585 aaKnown RBP8.95□□□□□ -0.98
PTPN20-212ENST00000502254 MAP3K13O43283 966 aa8.94□□□□□ -0.98
PTPN20-212ENST00000502254 TPRNQ4KMQ1 711 aa8.94□□□□□ -0.98
PTPN20-212ENST00000502254 ERICH3Q5RHP9 1530 aa8.94□□□□□ -0.98
PTPN20-212ENST00000502254 NBR1Q14596 966 aa8.93□□□□□ -0.98
PTPN20-212ENST00000502254 MFRPQ9BY79 579 aa8.93□□□□□ -0.98
PTPN20-212ENST00000502254 SNAPC4Q5SXM2 1469 aa8.93□□□□□ -0.98
PTPN20-212ENST00000502254 FHAD1B1AJZ9 1412 aa8.92□□□□□ -0.98
PTPN20-212ENST00000502254 RANGAP1P46060 587 aaPredicted RBP8.92□□□□□ -0.98
PTPN20-212ENST00000502254 CHMP7Q8WUX9 453 aaPredicted RBP8.92□□□□□ -0.98
PTPN20-212ENST00000502254 KIF21BO75037 1637 aa8.91□□□□□ -0.98
PTPN20-212ENST00000502254 PBRM1Q86U86 1689 aa8.91□□□□□ -0.98
PTPN20-212ENST00000502254 CADPS2Q86UW7 1296 aa8.9□□□□□ -0.98
PTPN20-212ENST00000502254 TNIKQ9UKE5 1360 aa8.89□□□□□ -0.99
PTPN20-212ENST00000502254 CUL7Q14999 1698 aa8.89□□□□□ -0.99
PTPN20-212ENST00000502254 MAGI1Q96QZ7 1491 aaPredicted RBP8.89□□□□□ -0.99
PTPN20-212ENST00000502254 SOX12O15370 315 aa8.88□□□□□ -0.99
PTPN20-212ENST00000502254 FBXO22Q8NEZ5 403 aa8.88□□□□□ -0.99
PTPN20-212ENST00000502254 ADAMTS12P58397 1594 aa8.87□□□□□ -0.99
PTPN20-212ENST00000502254 ZRANB1Q9UGI0 708 aa8.87□□□□□ -0.99
PTPN20-212ENST00000502254 SYNJ2O15056 1496 aa8.86□□□□□ -0.99
PTPN20-212ENST00000502254 CD44P16070 742 aaKnown RBP8.86□□□□□ -0.99
PTPN20-212ENST00000502254 EFCAB3Q8N7B9 438 aa8.86□□□□□ -0.99
PTPN20-212ENST00000502254 NLRP6P59044 892 aa8.85□□□□□ -0.99
PTPN20-212ENST00000502254 GRIN2AQ12879 1464 aa8.84□□□□□ -0.99
PTPN20-212ENST00000502254 PPP1R37O75864 691 aa8.84□□□□□ -0.99
PTPN20-212ENST00000502254 CABP2Q9NPB3 220 aa8.84□□□□□ -0.99
PTPN20-212ENST00000502254 CEP162Q5TB80 1403 aa8.83□□□□□ -1
PTPN20-212ENST00000502254 P3H3Q8IVL6 736 aa8.83□□□□□ -1
PTPN20-212ENST00000502254 PHF12Q96QT6 1004 aa8.83□□□□□ -1
PTPN20-212ENST00000502254 PHF8Q9UPP1 1060 aa8.82□□□□□ -1
PTPN20-212ENST00000502254 CLIP1P30622 1438 aa8.81□□□□□ -1
PTPN20-212ENST00000502254 C19orf67A6NJJ6 358 aa8.8□□□□□ -1
PTPN20-212ENST00000502254 WDR70Q9NW82 654 aa8.8□□□□□ -1
PTPN20-212ENST00000502254 KCNV2Q8TDN2 545 aa8.78□□□□□ -1
PTPN20-212ENST00000502254 KIAA0586Q9BVV6 1533 aa8.78□□□□□ -1
PTPN20-212ENST00000502254 NUP160Q12769 1436 aa8.78□□□□□ -1
PTPN20-212ENST00000502254 CEP170Q5SW79 1584 aa8.78□□□□□ -1
PTPN20-212ENST00000502254 JPH4Q96JJ6 628 aa8.77□□□□□ -1.01
PTPN20-212ENST00000502254 MS4A4AQ96JQ5 239 aa8.77□□□□□ -1.01
PTPN20-212ENST00000502254 TTBK1Q5TCY1 1321 aaPredicted RBP8.77□□□□□ -1.01
PTPN20-212ENST00000502254 CHD1O14646 1710 aa8.76□□□□□ -1.01
PTPN20-212ENST00000502254 IQGAP2Q13576 1575 aa8.75□□□□□ -1.01
PTPN20-212ENST00000502254 MS4A3Q96HJ5 214 aa8.75□□□□□ -1.01
PTPN20-212ENST00000502254 TRPC6Q9Y210 931 aa8.75□□□□□ -1.01
PTPN20-212ENST00000502254 ARHGAP35Q9NRY4 1499 aa8.75□□□□□ -1.01
PTPN20-212ENST00000502254 CTTNBP2Q8WZ74 1663 aa8.75□□□□□ -1.01
PTPN20-212ENST00000502254 TMEM106CQ9BVX2 250 aa8.74□□□□□ -1.01
PTPN20-212ENST00000502254 FHOD3Q2V2M9 1422 aa8.73□□□□□ -1.01
PTPN20-212ENST00000502254 ARAP1Q96P48 1450 aa8.72□□□□□ -1.01
PTPN20-212ENST00000502254 ILDR1Q86SU0 546 aaPredicted RBP8.72□□□□□ -1.01
PTPN20-212ENST00000502254 ATP1B4Q9UN42 357 aaPredicted RBP8.72□□□□□ -1.01
PTPN20-212ENST00000502254 UGGT2Q9NYU1 1516 aa8.71□□□□□ -1.01
PTPN20-212ENST00000502254 TIE1P35590 1138 aa8.71□□□□□ -1.02
PTPN20-212ENST00000502254 ARHGEF1Q92888 912 aaKnown RBP8.71□□□□□ -1.02
PTPN20-212ENST00000502254 NCKAP5LQ9HCH0 1330 aa8.71□□□□□ -1.02
PTPN20-212ENST00000502254 PRG4Q92954 1404 aaPredicted RBP8.71□□□□□ -1.02
PTPN20-212ENST00000502254 E2F4Q16254 413 aa8.7□□□□□ -1.02
PTPN20-212ENST00000502254 CARMIL2Q6F5E8 1435 aa8.7□□□□□ -1.02
PTPN20-212ENST00000502254 EFCAB5A4FU69 1503 aa8.7□□□□□ -1.02
PTPN20-212ENST00000502254 MFSD10Q14728 455 aa8.69□□□□□ -1.02
PTPN20-212ENST00000502254 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.69□□□□□ -1.02
PTPN20-212ENST00000502254 PPARGC1BQ86YN6 1023 aaKnown RBP8.69□□□□□ -1.02
PTPN20-212ENST00000502254 CRISPLD2Q9H0B8 497 aa8.69□□□□□ -1.02
PTPN20-212ENST00000502254 VPS8Q8N3P4 1428 aa8.69□□□□□ -1.02
PTPN20-212ENST00000502254 DISP1Q96F81 1524 aa8.69□□□□□ -1.02
PTPN20-212ENST00000502254 PDE4AP27815 886 aa8.68□□□□□ -1.02
PTPN20-212ENST00000502254 CLASP1Q7Z460 1538 aa8.68□□□□□ -1.02
PTPN20-212ENST00000502254 TTLL13PA6NNM8 815 aa8.67□□□□□ -1.02
PTPN20-212ENST00000502254 GOLGA2Q08379 1002 aa8.67□□□□□ -1.02
PTPN20-212ENST00000502254 MKRN3Q13064 507 aaKnown RBP8.67□□□□□ -1.02
PTPN20-212ENST00000502254 SAMD9Q5K651 1589 aa8.67□□□□□ -1.02
PTPN20-212ENST00000502254 KIAA0556O60303 1618 aa8.66□□□□□ -1.02
PTPN20-212ENST00000502254 ARIH1Q9Y4X5 557 aaPredicted RBP8.66□□□□□ -1.02
PTPN20-212ENST00000502254 FMN1Q68DA7 1419 aa8.65□□□□□ -1.02
PTPN20-212ENST00000502254 ARID3CA6NKF2 412 aa8.65□□□□□ -1.02
PTPN20-212ENST00000502254 BMP2KQ9NSY1 1161 aaPredicted RBP8.65□□□□□ -1.02
PTPN20-212ENST00000502254 PTPRGP23470 1445 aa8.64□□□□□ -1.03
PTPN20-212ENST00000502254 LARP6Q9BRS8 491 aaKnown RBP8.64□□□□□ -1.03
PTPN20-212ENST00000502254 ERCC6L2Q5T890 1561 aa8.64□□□□□ -1.03
PTPN20-212ENST00000502254 SHROOM2Q13796 1616 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms