RNA–Protein interactions for RNA: ENST00000502254.5

PTPN20-212, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 599 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-212ENST00000502254 AEBP2Q6ZN18 517 aaPredicted RBP17.14■□□□□ 0.33
PTPN20-212ENST00000502254 CHIC1Q5VXU3 224 aa17.13■□□□□ 0.33
PTPN20-212ENST00000502254 PHF23Q9BUL5 403 aaPredicted RBP15.14■□□□□ 0.01
PTPN20-212ENST00000502254 SENP3Q9H4L4 574 aaPredicted RBP14.43□□□□□ -0.1
PTPN20-212ENST00000502254 PLPPR3Q6T4P5 718 aa14.06□□□□□ -0.16
PTPN20-212ENST00000502254 FOXD1Q16676 465 aa13.36□□□□□ -0.27
PTPN20-212ENST00000502254 PPP6R1Q9UPN7 881 aa13.2□□□□□ -0.3
PTPN20-212ENST00000502254 ADRA2BP18089 450 aa13.17□□□□□ -0.3
PTPN20-212ENST00000502254 NISCHQ9Y2I1 1504 aa12.75□□□□□ -0.37
PTPN20-212ENST00000502254 PIAS4Q8N2W9 510 aaPredicted RBP12.64□□□□□ -0.39
PTPN20-212ENST00000502254 KCNA4P22459 653 aa12.62□□□□□ -0.39
PTPN20-212ENST00000502254 PPP4R3CPQ6ZMV5 832 aa12.44□□□□□ -0.42
PTPN20-212ENST00000502254 NCBP3Q53F19 620 aaKnown RBP12.21□□□□□ -0.45
PTPN20-212ENST00000502254 EHMT2Q96KQ7 1210 aa12.15□□□□□ -0.46
PTPN20-212ENST00000502254 MSH5O43196 834 aa12.14□□□□□ -0.47
PTPN20-212ENST00000502254 NPM3O75607 178 aaKnown RBP12.07□□□□□ -0.48
PTPN20-212ENST00000502254 SLC4A1APQ9BWU0 796 aaKnown RBP12.07□□□□□ -0.48
PTPN20-212ENST00000502254 SCAF1Q9H7N4 1312 aaKnown RBP12.03□□□□□ -0.48
PTPN20-212ENST00000502254 CNKSR2Q8WXI2 1034 aa12.02□□□□□ -0.49
PTPN20-212ENST00000502254 CSRNP3Q8WYN3 585 aa11.92□□□□□ -0.5
PTPN20-212ENST00000502254 MAPK8IP2Q13387 824 aaPredicted RBP11.84□□□□□ -0.51
PTPN20-212ENST00000502254 DNAJC5BQ9UF47 199 aa11.78□□□□□ -0.52
PTPN20-212ENST00000502254 RNF216Q9NWF9 866 aaPredicted RBP11.7□□□□□ -0.54
PTPN20-212ENST00000502254 ZBTB22O15209 634 aa11.65□□□□□ -0.54
PTPN20-212ENST00000502254 DMRT2Q9Y5R5 561 aa11.61□□□□□ -0.55
PTPN20-212ENST00000502254 HOXD11P31277 338 aaPredicted RBP11.56□□□□□ -0.56
PTPN20-212ENST00000502254 FOXD4L1Q9NU39 408 aa11.5□□□□□ -0.57
PTPN20-212ENST00000502254 SLC4A2P04920 1241 aa11.33□□□□□ -0.6
PTPN20-212ENST00000502254 CCDC180Q9P1Z9 1646 aa11.13□□□□□ -0.63
PTPN20-212ENST00000502254 MYCNP04198 464 aaPredicted RBP11.12□□□□□ -0.63
PTPN20-212ENST00000502254 ATXN8OSP0DMR3 200 aa11.1□□□□□ -0.63
PTPN20-212ENST00000502254 DCAF8L1A6NGE4 600 aa10.95□□□□□ -0.66
PTPN20-212ENST00000502254 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.92□□□□□ -0.66
PTPN20-212ENST00000502254 U3KPZ7 1027 aaPredicted RBP10.85□□□□□ -0.67
PTPN20-212ENST00000502254 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.83□□□□□ -0.68
PTPN20-212ENST00000502254 HNRNPUL2Q1KMD3 747 aaKnown RBP10.83□□□□□ -0.68
PTPN20-212ENST00000502254 ATF5Q9Y2D1 282 aaPredicted RBP10.82□□□□□ -0.68
PTPN20-212ENST00000502254 SAMD1Q6SPF0 538 aaPredicted RBP10.81□□□□□ -0.68
PTPN20-212ENST00000502254 ABCC9O60706 1549 aa10.78□□□□□ -0.68
PTPN20-212ENST00000502254 DCAF8L2P0C7V8 631 aa10.72□□□□□ -0.69
PTPN20-212ENST00000502254 FKBP8Q14318 412 aa10.68□□□□□ -0.7
PTPN20-212ENST00000502254 ZCCHC6Q5VYS8 1495 aaKnown RBP10.67□□□□□ -0.7
PTPN20-212ENST00000502254 APLP2Q06481 763 aa10.59□□□□□ -0.71
PTPN20-212ENST00000502254 ZNF219Q9P2Y4 722 aaPredicted RBP10.59□□□□□ -0.71
PTPN20-212ENST00000502254 DCAF1Q9Y4B6 1507 aa10.5□□□□□ -0.73
PTPN20-212ENST00000502254 AMER1Q5JTC6 1135 aaPredicted RBP10.48□□□□□ -0.73
PTPN20-212ENST00000502254 RNF39Q9H2S5 420 aa10.47□□□□□ -0.73
PTPN20-212ENST00000502254 RTN4Q9NQC3 1192 aaKnown RBP10.47□□□□□ -0.73
PTPN20-212ENST00000502254 NACADO15069 1562 aa10.44□□□□□ -0.74
PTPN20-212ENST00000502254 MYO15BQ96JP2 1530 aa10.43□□□□□ -0.74
PTPN20-212ENST00000502254 RB1CC1Q8TDY2 1594 aa10.4□□□□□ -0.74
PTPN20-212ENST00000502254 SPINK5Q9NQ38 1064 aaPredicted RBP10.4□□□□□ -0.74
PTPN20-212ENST00000502254 SHROOM4Q9ULL8 1493 aa10.4□□□□□ -0.74
PTPN20-212ENST00000502254 MKRN4PQ13434 485 aaPredicted RBP10.39□□□□□ -0.75
PTPN20-212ENST00000502254 C1QBPQ07021 282 aaKnown RBP10.36□□□□□ -0.75
PTPN20-212ENST00000502254 TRHP20396 242 aaPredicted RBP10.34□□□□□ -0.75
PTPN20-212ENST00000502254 POTEDQ86YR6 584 aa10.33□□□□□ -0.76
PTPN20-212ENST00000502254 POLA2Q14181 598 aa10.31□□□□□ -0.76
PTPN20-212ENST00000502254 SPDYE4A6NLX3 237 aa10.3□□□□□ -0.76
PTPN20-212ENST00000502254 CAPN15O75808 1086 aa10.29□□□□□ -0.76
PTPN20-212ENST00000502254 PROM2Q8N271 834 aa10.29□□□□□ -0.76
PTPN20-212ENST00000502254 SCRIBQ14160 1630 aa10.29□□□□□ -0.76
PTPN20-212ENST00000502254 FBLN2P98095 1184 aa10.28□□□□□ -0.76
PTPN20-212ENST00000502254 FBXO3Q9UK99 471 aa10.21□□□□□ -0.77
PTPN20-212ENST00000502254 PABPN1Q86U42 306 aaKnown RBP eCLIP10.18□□□□□ -0.78
PTPN20-212ENST00000502254 ZBTB12Q9Y330 459 aaPredicted RBP10.17□□□□□ -0.78
PTPN20-212ENST00000502254 ABCB7O75027 752 aa10.13□□□□□ -0.79
PTPN20-212ENST00000502254 SLC24A1O60721 1099 aa10.11□□□□□ -0.79
PTPN20-212ENST00000502254 DSG3P32926 999 aa10.1□□□□□ -0.79
PTPN20-212ENST00000502254 UNC13AQ9UPW8 1703 aa10.1□□□□□ -0.79
PTPN20-212ENST00000502254 BICRAQ9NZM4 1560 aa10.07□□□□□ -0.8
PTPN20-212ENST00000502254 VASPP50552 380 aaPredicted RBP10.07□□□□□ -0.8
PTPN20-212ENST00000502254 IFNLR1Q8IU57 520 aaPredicted RBP9.99□□□□□ -0.81
PTPN20-212ENST00000502254 SPDYE2BA6NHP3 402 aa9.96□□□□□ -0.82
PTPN20-212ENST00000502254 SPDYE6P0CI01 402 aa9.96□□□□□ -0.82
PTPN20-212ENST00000502254 SPDYE2Q495Y8 402 aa9.96□□□□□ -0.82
PTPN20-212ENST00000502254 SSUH2Q9Y2M2 353 aa9.95□□□□□ -0.82
PTPN20-212ENST00000502254 CECR2Q9BXF3 1484 aa9.95□□□□□ -0.82
PTPN20-212ENST00000502254 SUPT5HO00267 1087 aaKnown RBP9.94□□□□□ -0.82
PTPN20-212ENST00000502254 ZNF692Q9BU19 519 aaPredicted RBP9.94□□□□□ -0.82
PTPN20-212ENST00000502254 OSCARQ8IYS5 282 aa9.92□□□□□ -0.82
PTPN20-212ENST00000502254 STAG3Q9UJ98 1225 aa9.88□□□□□ -0.83
PTPN20-212ENST00000502254 MROH2BQ7Z745 1585 aa9.86□□□□□ -0.83
PTPN20-212ENST00000502254 RSF1Q96T23 1441 aaPredicted RBP9.86□□□□□ -0.83
PTPN20-212ENST00000502254 BAZ1AQ9NRL2 1556 aaPredicted RBP9.85□□□□□ -0.83
PTPN20-212ENST00000502254 CACNB1Q02641 598 aaPredicted RBP9.82□□□□□ -0.84
PTPN20-212ENST00000502254 PKD2Q13563 968 aa9.82□□□□□ -0.84
PTPN20-212ENST00000502254 SMARCA4P51532 1647 aa9.82□□□□□ -0.84
PTPN20-212ENST00000502254 EIF4G1Q04637 1599 aaKnown RBP9.8□□□□□ -0.84
PTPN20-212ENST00000502254 SPOCK2Q92563 424 aa9.77□□□□□ -0.85
PTPN20-212ENST00000502254 WIZO95785 1651 aa9.75□□□□□ -0.85
PTPN20-212ENST00000502254 KLHL34Q8N239 644 aa9.74□□□□□ -0.85
PTPN20-212ENST00000502254 ATAD2BQ9ULI0 1458 aa9.72□□□□□ -0.85
PTPN20-212ENST00000502254 PLCD3Q8N3E9 789 aa9.71□□□□□ -0.86
PTPN20-212ENST00000502254 MIER1Q8N108 512 aa9.7□□□□□ -0.86
PTPN20-212ENST00000502254 SMARCA2P51531 1590 aa9.7□□□□□ -0.86
PTPN20-212ENST00000502254 PLCB2Q00722 1185 aa9.69□□□□□ -0.86
PTPN20-212ENST00000502254 CC2D2AQ9P2K1 1620 aa9.69□□□□□ -0.86
PTPN20-212ENST00000502254 BAZ1BQ9UIG0 1483 aaKnown RBP9.67□□□□□ -0.86
PTPN20-212ENST00000502254 PEG3Q9GZU2 1588 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms