RNA–Protein interactions for RNA: ENSMUST00000112371.8

Scn1a-204, Transcript of Sodium channel protein type 1 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn1a, Length 8,287 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1a-204ENSMUST00000112371 Safb2Q80YR5 991 aaKnown RBP6.86□□□□□ -1.31
Scn1a-204ENSMUST00000112371 Vps8Q0P5W1 1427 aa6.86□□□□□ -1.31
Scn1a-204ENSMUST00000112371 Ncoa2Q61026 1462 aa6.86□□□□□ -1.31
Scn1a-204ENSMUST00000112371 Top2aQ01320 1528 aaKnown RBP6.86□□□□□ -1.31
Scn1a-204ENSMUST00000112371 Znf326O88291 580 aa6.85□□□□□ -1.31
Scn1a-204ENSMUST00000112371 Wwc2Q6NXJ0 1187 aa6.85□□□□□ -1.31
Scn1a-204ENSMUST00000112371 Rrp12Q6P5B0 1295 aaKnown RBP6.85□□□□□ -1.31
Scn1a-204ENSMUST00000112371 CalrP14211 416 aaKnown RBP6.85□□□□□ -1.31
Scn1a-204ENSMUST00000112371 Kif27Q7M6Z4 1394 aa6.85□□□□□ -1.31
Scn1a-204ENSMUST00000112371 AqrQ8CFQ3 1481 aaKnown RBP6.85□□□□□ -1.31
Scn1a-204ENSMUST00000112371 Kif3aP28741 701 aa6.84□□□□□ -1.31
Scn1a-204ENSMUST00000112371 Gtf3c5Q8R2T8 520 aa6.84□□□□□ -1.31
Scn1a-204ENSMUST00000112371 Erich4Q3UNU4 136 aa6.84□□□□□ -1.32
Scn1a-204ENSMUST00000112371 RdxP26043 583 aaKnown RBP6.83□□□□□ -1.32
Scn1a-204ENSMUST00000112371 Skap1Q3UUV5 355 aa6.83□□□□□ -1.32
Scn1a-204ENSMUST00000112371 Cald1E9QA15 768 aaKnown RBP6.83□□□□□ -1.32
Scn1a-204ENSMUST00000112371 Trap1aP19473 224 aa6.83□□□□□ -1.32
Scn1a-204ENSMUST00000112371 Ppp1r18Q8BQ30 594 aa6.82□□□□□ -1.32
Scn1a-204ENSMUST00000112371 A0A1L1SQF0 893 aa6.82□□□□□ -1.32
Scn1a-204ENSMUST00000112371 Tnnt2P50752 301 aa6.82□□□□□ -1.32
Scn1a-204ENSMUST00000112371 R3hcc1Q8BSI6 488 aa6.82□□□□□ -1.32
Scn1a-204ENSMUST00000112371 Mterf4Q8BVN4 346 aa6.82□□□□□ -1.32
Scn1a-204ENSMUST00000112371 Znf692Q3U381 531 aa6.82□□□□□ -1.32
Scn1a-204ENSMUST00000112371 Mre11Q61216 706 aa6.82□□□□□ -1.32
Scn1a-204ENSMUST00000112371 Hmgb3O54879 200 aaKnown RBP6.81□□□□□ -1.32
Scn1a-204ENSMUST00000112371 Atl3Q91YH5 541 aa6.81□□□□□ -1.32
Scn1a-204ENSMUST00000112371 EspnQ9ET47 871 aa6.81□□□□□ -1.32
Scn1a-204ENSMUST00000112371 Elp1Q7TT37 1333 aaKnown RBP6.81□□□□□ -1.32
Scn1a-204ENSMUST00000112371 ScribQ80U72 1612 aa6.81□□□□□ -1.32
Scn1a-204ENSMUST00000112371 Rwdd1Q9CQK7 243 aa6.81□□□□□ -1.32
Scn1a-204ENSMUST00000112371 SetQ9EQU5 289 aaKnown RBP6.81□□□□□ -1.32
Scn1a-204ENSMUST00000112371 Tubb6Q922F4 447 aa6.81□□□□□ -1.32
Scn1a-204ENSMUST00000112371 Gm45140A0A0N4SUM8 220 aa6.81□□□□□ -1.32
Scn1a-204ENSMUST00000112371 Ipo9Q91YE6 1041 aa6.8□□□□□ -1.32
Scn1a-204ENSMUST00000112371 Ush1cQ9ES64 910 aa6.8□□□□□ -1.32
Scn1a-204ENSMUST00000112371 Fam193aQ8CGI1 1231 aaKnown RBP6.8□□□□□ -1.32
Scn1a-204ENSMUST00000112371 Ccdc173A0JLY1 547 aa6.8□□□□□ -1.32
Scn1a-204ENSMUST00000112371 Kif7B7ZNG0 1348 aa6.8□□□□□ -1.32
Scn1a-204ENSMUST00000112371 Rfx7F8VPJ6 1459 aa6.8□□□□□ -1.32
Scn1a-204ENSMUST00000112371 Hap1O35668 628 aa6.79□□□□□ -1.32
Scn1a-204ENSMUST00000112371 Hsp90b1P08113 802 aaKnown RBP6.79□□□□□ -1.32
Scn1a-204ENSMUST00000112371 Casc1Q6TDU8 730 aa6.79□□□□□ -1.32
Scn1a-204ENSMUST00000112371 MsnP26041 577 aaKnown RBP6.79□□□□□ -1.32
Scn1a-204ENSMUST00000112371 Mrs2Q5NCE8 434 aa6.79□□□□□ -1.32
Scn1a-204ENSMUST00000112371 IqubQ8CDK3 788 aa6.79□□□□□ -1.32
Scn1a-204ENSMUST00000112371 Dnai1Q8C0M8 701 aa6.79□□□□□ -1.32
Scn1a-204ENSMUST00000112371 Kif20aP97329 887 aa6.79□□□□□ -1.32
Scn1a-204ENSMUST00000112371 Pdcl3Q8BVF2 240 aa6.79□□□□□ -1.32
Scn1a-204ENSMUST00000112371 Tubb4bP68372 445 aaKnown RBP6.79□□□□□ -1.32
Scn1a-204ENSMUST00000112371 Zscan21Q07231 555 aa6.79□□□□□ -1.32
Scn1a-204ENSMUST00000112371 Peg3Q3URU2 1571 aa6.79□□□□□ -1.32
Scn1a-204ENSMUST00000112371 Becn1O88597 448 aa6.78□□□□□ -1.32
Scn1a-204ENSMUST00000112371 CanxP35564 591 aaKnown RBP6.78□□□□□ -1.32
Scn1a-204ENSMUST00000112371 Tmf1B9EKI3 1091 aa6.78□□□□□ -1.32
Scn1a-204ENSMUST00000112371 Sart3Q9JLI8 962 aaKnown RBP6.78□□□□□ -1.32
Scn1a-204ENSMUST00000112371 Kif15Q6P9L6 1387 aa6.78□□□□□ -1.32
Scn1a-204ENSMUST00000112371 Nsd2Q8BVE8 1365 aa6.78□□□□□ -1.32
Scn1a-204ENSMUST00000112371 EzrP26040 586 aaKnown RBP6.77□□□□□ -1.32
Scn1a-204ENSMUST00000112371 Rsph3aQ3UFY4 516 aa6.77□□□□□ -1.32
Scn1a-204ENSMUST00000112371 Zrsr2Q62377 462 aaKnown RBP6.77□□□□□ -1.32
Scn1a-204ENSMUST00000112371 Hsp90ab1P11499 724 aaKnown RBP6.77□□□□□ -1.33
Scn1a-204ENSMUST00000112371 Ralbp1Q62172 648 aa6.77□□□□□ -1.33
Scn1a-204ENSMUST00000112371 Kif16bB1AVY7 1312 aa6.77□□□□□ -1.33
Scn1a-204ENSMUST00000112371 Pbrm1Q8BSQ9 1634 aaKnown RBP6.77□□□□□ -1.33
Scn1a-204ENSMUST00000112371 Kif3cO35066 796 aa6.77□□□□□ -1.33
Scn1a-204ENSMUST00000112371 Ift140E9PY46 1464 aa6.77□□□□□ -1.33
Scn1a-204ENSMUST00000112371 Smg6P61406 1418 aaKnown RBP6.77□□□□□ -1.33
Scn1a-204ENSMUST00000112371 Ofd1Q80Z25 1017 aa6.77□□□□□ -1.33
Scn1a-204ENSMUST00000112371 NinlQ6ZQ12 1394 aa6.77□□□□□ -1.33
Scn1a-204ENSMUST00000112371 Cavin1O54724 392 aa6.76□□□□□ -1.33
Scn1a-204ENSMUST00000112371 Rrp9Q91WM3 475 aaKnown RBP6.76□□□□□ -1.33
Scn1a-204ENSMUST00000112371 Hs1bp3Q3TC93 395 aa6.76□□□□□ -1.33
Scn1a-204ENSMUST00000112371 Mak16Q8BGS0 296 aaKnown RBP6.76□□□□□ -1.33
Scn1a-204ENSMUST00000112371 Mcm2P97310 904 aa6.75□□□□□ -1.33
Scn1a-204ENSMUST00000112371 Sall2Q9QX96 1004 aa6.75□□□□□ -1.33
Scn1a-204ENSMUST00000112371 VgfQ0VGU4 617 aa6.75□□□□□ -1.33
Scn1a-204ENSMUST00000112371 Tpm3-rs7D3Z2H9 248 aa6.75□□□□□ -1.33
Scn1a-204ENSMUST00000112371 Plcd4Q8K3R3 807 aa6.75□□□□□ -1.33
Scn1a-204ENSMUST00000112371 Ubl4bQ9CQ84 188 aa6.75□□□□□ -1.33
Scn1a-204ENSMUST00000112371 Shroom4Q1W617 1475 aa6.75□□□□□ -1.33
Scn1a-204ENSMUST00000112371 Ppp4r2Q0VGB7 417 aa6.75□□□□□ -1.33
Scn1a-204ENSMUST00000112371 Synj1Q8CHC4 1574 aa6.75□□□□□ -1.33
Scn1a-204ENSMUST00000112371 EprsQ8CGC7 1512 aaKnown RBP6.75□□□□□ -1.33
Scn1a-204ENSMUST00000112371 Erich3F6QRE9 1637 aa6.75□□□□□ -1.33
Scn1a-204ENSMUST00000112371 Phldb1Q6PDH0 1371 aaKnown RBP6.75□□□□□ -1.33
Scn1a-204ENSMUST00000112371 Tiam1Q60610 1591 aa6.74□□□□□ -1.33
Scn1a-204ENSMUST00000112371 Iqgap2Q3UQ44 1575 aa6.74□□□□□ -1.33
Scn1a-204ENSMUST00000112371 PnnO35691 725 aaKnown RBP6.74□□□□□ -1.33
Scn1a-204ENSMUST00000112371 Tubb4aQ9D6F9 444 aa6.74□□□□□ -1.33
Scn1a-204ENSMUST00000112371 Fez2Q6TYB5 348 aa6.74□□□□□ -1.33
Scn1a-204ENSMUST00000112371 Cetn4Q8K4K1 168 aa6.74□□□□□ -1.33
Scn1a-204ENSMUST00000112371 Tmc1Q8R4P5 757 aa6.74□□□□□ -1.33
Scn1a-204ENSMUST00000112371 Fam184aE9PW83 1143 aa6.74□□□□□ -1.33
Scn1a-204ENSMUST00000112371 Rock1P70335 1354 aa6.73□□□□□ -1.33
Scn1a-204ENSMUST00000112371 Rangap1P46061 589 aaKnown RBP6.73□□□□□ -1.33
Scn1a-204ENSMUST00000112371 Tpm2P58774 284 aa6.73□□□□□ -1.33
Scn1a-204ENSMUST00000112371 Kiaa1211Q5PR69 1207 aa6.73□□□□□ -1.33
Scn1a-204ENSMUST00000112371 SrrtQ99MR6 875 aaKnown RBP6.73□□□□□ -1.33
Scn1a-204ENSMUST00000112371 Phf14Q9D4H9 881 aa6.73□□□□□ -1.33
Scn1a-204ENSMUST00000112371 Chaf1aQ9QWF0 911 aa6.73□□□□□ -1.33
Retrieved 100 of 22,080 RNA–protein pairs in 10.6 ms