RNA–Protein interactions for RNA: YPR013C

CMR3, Transcript of Putative zinc finger protein, yeast

Gene CMR3, Length 954 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CMR3	YPR013C	ALT2	P52892	507 aa		4.39	□□□□□ -1.71
CMR3	YPR013C	YGR126W	P53274	230 aa		4.39	□□□□□ -1.71
CMR3	YPR013C	DBP9	Q06218	594 aa	Known RBP	4.39	□□□□□ -1.71
CMR3	YPR013C	PSY3	Q12318	242 aa		4.39	□□□□□ -1.71
CMR3	YPR013C	GPH1	P06738	902 aa	Known RBP	4.38	□□□□□ -1.71
CMR3	YPR013C	RHO2	P06781	192 aa		4.38	□□□□□ -1.71
CMR3	YPR013C	PUT2	P07275	575 aa		4.38	□□□□□ -1.71
CMR3	YPR013C	MCM4	P30665	933 aa	Known RBP	4.38	□□□□□ -1.71
CMR3	YPR013C	MIA40	P36046	403 aa		4.38	□□□□□ -1.71
CMR3	YPR013C	MMS4	P38257	691 aa		4.38	□□□□□ -1.71
CMR3	YPR013C	MBB1	P39534	108 aa		4.38	□□□□□ -1.71
CMR3	YPR013C	PCL7	P40186	285 aa		4.38	□□□□□ -1.71
CMR3	YPR013C	SDS3	P40505	327 aa		4.38	□□□□□ -1.71
CMR3	YPR013C	CDC1	P40986	491 aa		4.38	□□□□□ -1.71
CMR3	YPR013C	RPS10B	P46784	105 aa	Known RBP	4.38	□□□□□ -1.71
CMR3	YPR013C	YJL043W	P47053	257 aa		4.38	□□□□□ -1.71
CMR3	YPR013C	YGL108C	P53139	140 aa		4.38	□□□□□ -1.71
CMR3	YPR013C	YTP1	P53584	459 aa		4.38	□□□□□ -1.71
CMR3	YPR013C	SUN4	P53616	420 aa		4.38	□□□□□ -1.71
CMR3	YPR013C	MGR3	Q04472	501 aa		4.38	□□□□□ -1.71
CMR3	YPR013C	ULA1	Q12059	462 aa		4.38	□□□□□ -1.71
CMR3	YPR013C	YDR061W	Q12298	539 aa		4.38	□□□□□ -1.71
CMR3	YPR013C	CBP1	P07252	654 aa		4.37	□□□□□ -1.71
CMR3	YPR013C	COR1	P07256	457 aa		4.37	□□□□□ -1.71
CMR3	YPR013C	AQY1	P0CD91	305 aa		4.37	□□□□□ -1.71
CMR3	YPR013C	DAP2	P18962	818 aa		4.37	□□□□□ -1.71
CMR3	YPR013C	MAK32	P23060	363 aa		4.37	□□□□□ -1.71
CMR3	YPR013C	CLB2	P24869	491 aa		4.37	□□□□□ -1.71
CMR3	YPR013C	SHP1	P34223	423 aa		4.37	□□□□□ -1.71
CMR3	YPR013C	YTA12	P40341	825 aa		4.37	□□□□□ -1.71
CMR3	YPR013C	EPL1	P43572	832 aa		4.37	□□□□□ -1.71
CMR3	YPR013C	ECM27	P47144	725 aa		4.37	□□□□□ -1.71
CMR3	YPR013C	ORC5	P50874	479 aa		4.37	□□□□□ -1.71
CMR3	YPR013C	RPN9	Q04062	393 aa	Known RBP	4.37	□□□□□ -1.71
CMR3	YPR013C	DCS1	Q06151	350 aa		4.37	□□□□□ -1.71
CMR3	YPR013C	ATG26	Q06321	1198 aa		4.37	□□□□□ -1.71
CMR3	YPR013C	RRP9	Q06506	573 aa	Known RBP	4.37	□□□□□ -1.71
CMR3	YPR013C	YDL057W	Q07379	328 aa		4.37	□□□□□ -1.71
CMR3	YPR013C	APL5	Q08951	932 aa	Known RBP	4.37	□□□□□ -1.71
CMR3	YPR013C	VAM3	Q12241	283 aa		4.37	□□□□□ -1.71
CMR3	YPR013C	TFB5	Q3E7C1	72 aa	Predicted RBP	4.37	□□□□□ -1.71
CMR3	YPR013C	RAV1	P47104	1357 aa		4.37	□□□□□ -1.71
CMR3	YPR013C	YER145C-A	A0A023PYF4	145 aa		4.36	□□□□□ -1.71
CMR3	YPR013C	PEP4	P07267	405 aa	Known RBP	4.36	□□□□□ -1.71
CMR3	YPR013C	GPA1	P08539	472 aa		4.36	□□□□□ -1.71
CMR3	YPR013C	GSY2	P27472	705 aa		4.36	□□□□□ -1.71
CMR3	YPR013C	HIR2	P32480	875 aa		4.36	□□□□□ -1.71
CMR3	YPR013C	OCT1	P35999	772 aa		4.36	□□□□□ -1.71
CMR3	YPR013C	PXL1	P36166	706 aa		4.36	□□□□□ -1.71
CMR3	YPR013C	ERV46	P39727	415 aa		4.36	□□□□□ -1.71
CMR3	YPR013C	CHS6	P40955	746 aa		4.36	□□□□□ -1.71
CMR3	YPR013C	LYS20	P48570	428 aa	Known RBP	4.36	□□□□□ -1.71
CMR3	YPR013C	TOM22	P49334	152 aa		4.36	□□□□□ -1.71
CMR3	YPR013C	IMD3	P50095	523 aa	Known RBP	4.36	□□□□□ -1.71
CMR3	YPR013C	RMD9	P53140	646 aa	Known RBP	4.36	□□□□□ -1.71
CMR3	YPR013C	SLG1	P54867	378 aa		4.36	□□□□□ -1.71
CMR3	YPR013C	TMN2	Q04562	672 aa		4.36	□□□□□ -1.71
CMR3	YPR013C	PDR8	Q06149	701 aa		4.36	□□□□□ -1.71
CMR3	YPR013C	SPH1	Q06160	661 aa		4.36	□□□□□ -1.71
CMR3	YPR013C	PML1	Q07930	204 aa	Predicted RBP	4.36	□□□□□ -1.71
CMR3	YPR013C	THP1	Q08231	455 aa		4.36	□□□□□ -1.71
CMR3	YPR013C	MCH4	Q08268	501 aa		4.36	□□□□□ -1.71
CMR3	YPR013C	HER1	Q12276	1246 aa		4.36	□□□□□ -1.71
CMR3	YPR013C	SUT2	Q12286	268 aa		4.36	□□□□□ -1.71
CMR3	YPR013C	BRR1	Q99177	341 aa	Predicted RBP	4.36	□□□□□ -1.71
CMR3	YPR013C	MTR10	Q99189	972 aa		4.36	□□□□□ -1.71
CMR3	YPR013C	RPN13	O13563	156 aa		4.35	□□□□□ -1.71
CMR3	YPR013C	ADE5,7	P07244	802 aa	Known RBP	4.35	□□□□□ -1.71
CMR3	YPR013C	YMC1	P32331	307 aa		4.35	□□□□□ -1.71
CMR3	YPR013C	SPC110	P32380	944 aa		4.35	□□□□□ -1.71
CMR3	YPR013C	RRP1	P35178	278 aa	Predicted RBP	4.35	□□□□□ -1.71
CMR3	YPR013C	MRPL4	P36517	319 aa		4.35	□□□□□ -1.71
CMR3	YPR013C	ZTA1	P38230	334 aa	Known RBP	4.35	□□□□□ -1.71
CMR3	YPR013C	FAD1	P38913	306 aa		4.35	□□□□□ -1.71
CMR3	YPR013C	VHS2	P40463	436 aa		4.35	□□□□□ -1.71
CMR3	YPR013C	YIL089W	P40500	205 aa		4.35	□□□□□ -1.71
CMR3	YPR013C	ULP2	P40537	1034 aa	Predicted RBP	4.35	□□□□□ -1.71
CMR3	YPR013C	CIN1	P40987	1014 aa		4.35	□□□□□ -1.71
CMR3	YPR013C	SHE4	P51534	789 aa		4.35	□□□□□ -1.71
CMR3	YPR013C	YNR068C	P53754	272 aa		4.35	□□□□□ -1.71
CMR3	YPR013C	PDR16	P53860	351 aa	Known RBP	4.35	□□□□□ -1.71
CMR3	YPR013C	DUG3	P53871	357 aa		4.35	□□□□□ -1.71
CMR3	YPR013C	HEF3	P53978	1044 aa	Known RBP	4.35	□□□□□ -1.71
CMR3	YPR013C	ADE13	Q05911	482 aa	Known RBP	4.35	□□□□□ -1.71
CMR3	YPR013C	MLH2	Q07980	695 aa		4.35	□□□□□ -1.71
CMR3	YPR013C	DIS3	Q08162	1001 aa	Known RBP	4.35	□□□□□ -1.71
CMR3	YPR013C	NCE102	Q12207	173 aa	RIP-Chip data	4.35	□□□□□ -1.71	not detected
CMR3	YPR013C	RDL1	Q12305	139 aa	Known RBP	4.35	□□□□□ -1.71
CMR3	YPR013C	TY1B-A	O13527	1196 aa	Known RBP	4.34	□□□□□ -1.71
CMR3	YPR013C	PDE2	P06776	526 aa		4.34	□□□□□ -1.71
CMR3	YPR013C	RPC40	P07703	335 aa	Known RBP	4.34	□□□□□ -1.71
CMR3	YPR013C	NUP1	P20676	1076 aa		4.34	□□□□□ -1.71
CMR3	YPR013C	KRE2	P27809	442 aa		4.34	□□□□□ -1.71
CMR3	YPR013C	YKL023W	P36103	277 aa	Known RBP	4.34	□□□□□ -1.71
CMR3	YPR013C	PFF1	P38244	976 aa		4.34	□□□□□ -1.71
CMR3	YPR013C	APD1	P38281	316 aa		4.34	□□□□□ -1.71
CMR3	YPR013C	VHC1	P38329	1120 aa		4.34	□□□□□ -1.71
CMR3	YPR013C	ARP1	P38696	384 aa		4.34	□□□□□ -1.71
CMR3	YPR013C	UBA4	P38820	440 aa		4.34	□□□□□ -1.71
CMR3	YPR013C	YHR210C	P38893	341 aa		4.34	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms