RNA–Protein interactions for RNA: YPL002C

SNF8, Transcript of Component of the ESCRT-II complex, yeast

Gene SNF8, Length 702 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNF8	YPL002C	YJL043W	P47053	257 aa		4.15	□□□□□ -1.75
SNF8	YPL002C	TCB2	P48231	1178 aa		4.15	□□□□□ -1.75
SNF8	YPL002C	MRX6	P48564	524 aa		4.15	□□□□□ -1.75
SNF8	YPL002C	TAN1	P53072	289 aa	Predicted RBP	4.15	□□□□□ -1.75
SNF8	YPL002C	HOP2	P53187	214 aa		4.15	□□□□□ -1.75
SNF8	YPL002C	ALG12	P53730	551 aa		4.15	□□□□□ -1.75
SNF8	YPL002C	YNL144C	P53907	740 aa		4.15	□□□□□ -1.75
SNF8	YPL002C	SVL3	Q03088	825 aa	Known RBP	4.15	□□□□□ -1.75
SNF8	YPL002C	PPM1	Q04081	328 aa		4.15	□□□□□ -1.75
SNF8	YPL002C	AIM32	Q04689	311 aa		4.15	□□□□□ -1.75
SNF8	YPL002C	DIS3	Q08162	1001 aa	Known RBP	4.15	□□□□□ -1.75
SNF8	YPL002C	THI20	Q08224	551 aa		4.15	□□□□□ -1.75
SNF8	YPL002C	YLR046C	Q12253	270 aa		4.15	□□□□□ -1.75
SNF8	YPL002C	YDR061W	Q12298	539 aa		4.15	□□□□□ -1.75
SNF8	YPL002C	SFI1	Q12369	946 aa		4.15	□□□□□ -1.75
SNF8	YPL002C	SST2	P11972	698 aa	Known RBP	4.14	□□□□□ -1.75
SNF8	YPL002C	BEM1	P29366	551 aa		4.14	□□□□□ -1.75
SNF8	YPL002C	MRPL9	P31334	269 aa		4.14	□□□□□ -1.75
SNF8	YPL002C	MTC7	P32633	139 aa		4.14	□□□□□ -1.75
SNF8	YPL002C	TFC3	P34111	1160 aa		4.14	□□□□□ -1.75
SNF8	YPL002C	EHT1	P38295	451 aa		4.14	□□□□□ -1.75
SNF8	YPL002C	TAE1	P38340	232 aa		4.14	□□□□□ -1.75
SNF8	YPL002C	SRP68	P38687	599 aa	Known RBP	4.14	□□□□□ -1.75
SNF8	YPL002C	NPR3	P38742	1146 aa		4.14	□□□□□ -1.75
SNF8	YPL002C	CIR1	P42940	261 aa		4.14	□□□□□ -1.75
SNF8	YPL002C	YFL015C	P43578	164 aa		4.14	□□□□□ -1.75
SNF8	YPL002C	STB2	P46679	850 aa		4.14	□□□□□ -1.75
SNF8	YPL002C	YTP1	P53584	459 aa		4.14	□□□□□ -1.75
SNF8	YPL002C	PRM1	P53835	661 aa		4.14	□□□□□ -1.75
SNF8	YPL002C	RSC9	Q03124	581 aa		4.14	□□□□□ -1.75
SNF8	YPL002C	RSM10	Q03201	203 aa		4.14	□□□□□ -1.75
SNF8	YPL002C	YMR178W	Q03219	274 aa	Known RBP	4.14	□□□□□ -1.75
SNF8	YPL002C	VMS1	Q04311	632 aa	Known RBP	4.14	□□□□□ -1.75
SNF8	YPL002C	YLR297W	Q05899	129 aa		4.14	□□□□□ -1.75
SNF8	YPL002C	AAD4	Q07747	329 aa		4.14	□□□□□ -1.75
SNF8	YPL002C	SRO7	Q12038	1033 aa		4.14	□□□□□ -1.75
SNF8	YPL002C	SKM1	Q12469	655 aa		4.14	□□□□□ -1.75
SNF8	YPL002C	SEC39	Q12745	709 aa		4.14	□□□□□ -1.75
SNF8	YPL002C	NOP14	Q99207	810 aa	Known RBP	4.14	□□□□□ -1.75
SNF8	YPL002C	HIS1	P00498	297 aa	Known RBP	4.13	□□□□□ -1.75
SNF8	YPL002C	YKR104W	P0CE69	306 aa		4.13	□□□□□ -1.75
SNF8	YPL002C	MTF2	P10849	440 aa		4.13	□□□□□ -1.75
SNF8	YPL002C	HOP1	P20050	605 aa		4.13	□□□□□ -1.75
SNF8	YPL002C	GEX1	P25596	615 aa		4.13	□□□□□ -1.75
SNF8	YPL002C	PRP19	P32523	503 aa	Known RBP	4.13	□□□□□ -1.75
SNF8	YPL002C	GEX2	P36173	615 aa		4.13	□□□□□ -1.75
SNF8	YPL002C	FUI1	P38196	639 aa		4.13	□□□□□ -1.75
SNF8	YPL002C	ASG7	P46993	209 aa		4.13	□□□□□ -1.75
SNF8	YPL002C	GPI8	P49018	411 aa		4.13	□□□□□ -1.75
SNF8	YPL002C	VPS20	Q04272	221 aa		4.13	□□□□□ -1.75
SNF8	YPL002C	RPC11	Q04307	110 aa	Predicted RBP	4.13	□□□□□ -1.75
SNF8	YPL002C	ATG10	Q07879	167 aa		4.13	□□□□□ -1.75
SNF8	YPL002C	EMP46	Q12396	444 aa		4.13	□□□□□ -1.75
SNF8	YPL002C	PEX11	Q12462	236 aa		4.13	□□□□□ -1.75
SNF8	YPL002C	IPP1	P00817	287 aa	Known RBP	4.12	□□□□□ -1.75
SNF8	YPL002C	RPL22A	P05749	121 aa	Known RBP	4.12	□□□□□ -1.75
SNF8	YPL002C	TRX2	P22803	104 aa	Known RBP	4.12	□□□□□ -1.75
SNF8	YPL002C	SNT1	P25357	1226 aa		4.12	□□□□□ -1.75
SNF8	YPL002C	CIN8	P27895	1000 aa		4.12	□□□□□ -1.75
SNF8	YPL002C	PMT1	P33775	817 aa		4.12	□□□□□ -1.75
SNF8	YPL002C	PXL1	P36166	706 aa		4.12	□□□□□ -1.75
SNF8	YPL002C	PIM1	P36775	1133 aa		4.12	□□□□□ -1.75
SNF8	YPL002C	RFT1	P38206	574 aa	Predicted RBP	4.12	□□□□□ -1.75
SNF8	YPL002C	FAT1	P38225	669 aa		4.12	□□□□□ -1.75
SNF8	YPL002C	PCA1	P38360	1216 aa		4.12	□□□□□ -1.75
SNF8	YPL002C	PRM9	P39551	298 aa		4.12	□□□□□ -1.75
SNF8	YPL002C	MEP1	P40260	492 aa		4.12	□□□□□ -1.75
SNF8	YPL002C	MEP2	P41948	499 aa		4.12	□□□□□ -1.75
SNF8	YPL002C	YDL183C	P48569	320 aa		4.12	□□□□□ -1.75
SNF8	YPL002C	SAP4	P53036	818 aa		4.12	□□□□□ -1.75
SNF8	YPL002C	EMC4	P53073	190 aa		4.12	□□□□□ -1.75
SNF8	YPL002C	NNF2	P53253	936 aa		4.12	□□□□□ -1.75
SNF8	YPL002C	YNL058C	P53947	316 aa		4.12	□□□□□ -1.75
SNF8	YPL002C	KTR6	P54070	446 aa		4.12	□□□□□ -1.75
SNF8	YPL002C	ERG13	P54839	491 aa	Known RBP	4.12	□□□□□ -1.75
SNF8	YPL002C	ECM9	Q02202	377 aa		4.12	□□□□□ -1.75
SNF8	YPL002C	PIR1	Q03178	341 aa		4.12	□□□□□ -1.75
SNF8	YPL002C	RRP9	Q06506	573 aa	Known RBP	4.12	□□□□□ -1.75
SNF8	YPL002C	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	4.12	□□□□□ -1.75	not detected
SNF8	YPL002C	CDC33	P07260	213 aa	Known RBP	4.11	□□□□□ -1.75
SNF8	YPL002C	MIS1	P09440	975 aa	Known RBP	4.11	□□□□□ -1.75
SNF8	YPL002C	RPL43A	P0CX25	92 aa	Known RBP	4.11	□□□□□ -1.75
SNF8	YPL002C	RPL43B	P0CX26	92 aa		4.11	□□□□□ -1.75
SNF8	YPL002C	BIK1	P11709	440 aa		4.11	□□□□□ -1.75
SNF8	YPL002C	CDC26	P14724	124 aa		4.11	□□□□□ -1.75
SNF8	YPL002C	MNE1	P24720	663 aa		4.11	□□□□□ -1.75
SNF8	YPL002C	GYP6	P32806	458 aa		4.11	□□□□□ -1.75
SNF8	YPL002C	SRB2	P34162	210 aa		4.11	□□□□□ -1.75
SNF8	YPL002C	PEX5	P35056	612 aa		4.11	□□□□□ -1.75
SNF8	YPL002C	YKL050C	P35736	922 aa		4.11	□□□□□ -1.75
SNF8	YPL002C	DHR2	P36009	735 aa	Predicted RBP	4.11	□□□□□ -1.75
SNF8	YPL002C	OAF3	P36023	863 aa		4.11	□□□□□ -1.75
SNF8	YPL002C	YPT10	P38146	199 aa		4.11	□□□□□ -1.75
SNF8	YPL002C	YHR218W	P38899	603 aa		4.11	□□□□□ -1.75
SNF8	YPL002C	YEL075C	P39972	122 aa		4.11	□□□□□ -1.75
SNF8	YPL002C	FAU1	P40099	211 aa		4.11	□□□□□ -1.75
SNF8	YPL002C	RAD26	P40352	1085 aa		4.11	□□□□□ -1.75
SNF8	YPL002C	SNO3	P43544	222 aa		4.11	□□□□□ -1.75
SNF8	YPL002C	RPS10B	P46784	105 aa	Known RBP	4.11	□□□□□ -1.75
SNF8	YPL002C	GLG2	P47011	380 aa		4.11	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 24.2 ms