RNA–Protein interactions for RNA: YOR216C

RUD3, Transcript of Golgi matrix protein, yeastyeast

Gene RUD3, Length 1,455 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RUD3YOR216C SNG1P46950 547 aa2.28□□□□□ -2.04
RUD3YOR216C YGR016WP53209 190 aa2.28□□□□□ -2.04
RUD3YOR216C PRP3Q03338 469 aaPredicted RBP2.28□□□□□ -2.04
RUD3YOR216C YKU80Q04437 629 aa2.28□□□□□ -2.04
RUD3YOR216C RLP24Q07915 199 aaKnown RBP2.28□□□□□ -2.04
RUD3YOR216C RRG1Q12167 365 aaPredicted RBP2.28□□□□□ -2.04
RUD3YOR216C SPE2P21182 396 aa2.27□□□□□ -2.05
RUD3YOR216C KRR1P25586 316 aaPredicted RBP2.27□□□□□ -2.05
RUD3YOR216C CDC15P27636 974 aa2.27□□□□□ -2.05
RUD3YOR216C JEM1P40358 645 aa2.27□□□□□ -2.05
RUD3YOR216C PFK26P40433 827 aaKnown RBP2.27□□□□□ -2.05
RUD3YOR216C SMM1P53720 384 aaKnown RBP2.27□□□□□ -2.05
RUD3YOR216C SYF1Q04048 859 aaPredicted RBP2.27□□□□□ -2.05
RUD3YOR216C YDR341CQ05506 607 aaKnown RBP2.27□□□□□ -2.05
RUD3YOR216C PBA1Q05778 276 aa2.27□□□□□ -2.05
RUD3YOR216C SMC6Q12749 1114 aa2.27□□□□□ -2.05
RUD3YOR216C YOR019WQ99248 730 aa2.27□□□□□ -2.05
RUD3YOR216C SEM1O94742 89 aa2.26□□□□□ -2.05
RUD3YOR216C ADH2P00331 348 aaKnown RBP2.26□□□□□ -2.05
RUD3YOR216C RED1P14291 827 aa2.26□□□□□ -2.05
RUD3YOR216C SUI2P20459 304 aaKnown RBP2.26□□□□□ -2.05
RUD3YOR216C MUD2P36084 527 aaKnown RBP2.26□□□□□ -2.05
RUD3YOR216C POP2P39008 433 aa2.26□□□□□ -2.05
RUD3YOR216C UIP3P39547 235 aa2.26□□□□□ -2.05
RUD3YOR216C RIC1P40395 1056 aa2.26□□□□□ -2.05
RUD3YOR216C YIL067CP40514 678 aa2.26□□□□□ -2.05
RUD3YOR216C GPI8P49018 411 aa2.26□□□□□ -2.05
RUD3YOR216C OCA1P50946 238 aaPredicted RBP2.26□□□□□ -2.05
RUD3YOR216C YML6P51998 286 aa2.26□□□□□ -2.05
RUD3YOR216C CWC22P53333 577 aaKnown RBP2.26□□□□□ -2.05
RUD3YOR216C ARK1P53974 638 aa2.26□□□□□ -2.05
RUD3YOR216C MRPL13Q02204 264 aa2.26□□□□□ -2.05
RUD3YOR216C BNA5Q05979 453 aa2.26□□□□□ -2.05
RUD3YOR216C MRPL35Q06678 367 aa2.26□□□□□ -2.05
RUD3YOR216C ERG27Q12452 347 aaKnown RBP2.26□□□□□ -2.05
RUD3YOR216C VCX1Q99385 411 aa2.26□□□□□ -2.05
RUD3YOR216C TY1B-AO13527 1196 aaKnown RBP2.26□□□□□ -2.05
RUD3YOR216C ARG81P05085 880 aa2.26□□□□□ -2.05
RUD3YOR216C NUC1P08466 329 aa2.26□□□□□ -2.05
RUD3YOR216C PFK2P16862 959 aaKnown RBP RIP-Chip data2.26□□□□□ -2.05not detected
RUD3YOR216C TPM1P17536 199 aaKnown RBP2.26□□□□□ -2.05
RUD3YOR216C YCL049CP25577 312 aa2.26□□□□□ -2.05
RUD3YOR216C TEF4P36008 412 aaKnown RBP2.26□□□□□ -2.05
RUD3YOR216C TSC10P38342 320 aa2.26□□□□□ -2.05
RUD3YOR216C UTP9P38882 575 aaKnown RBP2.26□□□□□ -2.05
RUD3YOR216C HAT2P39984 401 aa2.26□□□□□ -2.05
RUD3YOR216C PSF2P40359 213 aa2.26□□□□□ -2.05
RUD3YOR216C ARF3P40994 183 aaRIP-Chip data2.26□□□□□ -2.05 RIP-Chip
RUD3YOR216C IRC6P43615 237 aa2.26□□□□□ -2.05
RUD3YOR216C UPF3P48412 387 aaKnown RBP2.26□□□□□ -2.05
RUD3YOR216C ARC35P53731 342 aaKnown RBP2.26□□□□□ -2.05
RUD3YOR216C CBK1P53894 756 aa2.26□□□□□ -2.05
RUD3YOR216C TIM10P87108 93 aa2.26□□□□□ -2.05
RUD3YOR216C TAF11Q04226 346 aa2.26□□□□□ -2.05
RUD3YOR216C VTI1Q04338 217 aa2.26□□□□□ -2.05
RUD3YOR216C VID22Q05934 901 aa2.26□□□□□ -2.05
RUD3YOR216C PSR1Q07800 427 aa2.26□□□□□ -2.05
RUD3YOR216C SFI1Q12369 946 aa2.26□□□□□ -2.05
RUD3YOR216C STF1P01098 86 aa2.25□□□□□ -2.05
RUD3YOR216C HHF1P02309 103 aaKnown RBP2.25□□□□□ -2.05
RUD3YOR216C CDC16P09798 840 aa2.25□□□□□ -2.05
RUD3YOR216C MTF2P10849 440 aa2.25□□□□□ -2.05
RUD3YOR216C CPR1P14832 162 aaKnown RBP2.25□□□□□ -2.05
RUD3YOR216C MET8P15807 274 aa2.25□□□□□ -2.05
RUD3YOR216C CNS1P33313 385 aa2.25□□□□□ -2.05
RUD3YOR216C BYE1P36106 594 aa2.25□□□□□ -2.05
RUD3YOR216C RXT2P38255 430 aa2.25□□□□□ -2.05
RUD3YOR216C DBP8P38719 431 aa2.25□□□□□ -2.05
RUD3YOR216C MEP1P40260 492 aa2.25□□□□□ -2.05
RUD3YOR216C CIA1Q05583 330 aa2.25□□□□□ -2.05
RUD3YOR216C HSP42Q12329 375 aa2.25□□□□□ -2.05
RUD3YOR216C ISA2Q12425 185 aa2.25□□□□□ -2.05
RUD3YOR216C TPK1P06244 397 aa2.24□□□□□ -2.05
RUD3YOR216C LPD1P09624 499 aaKnown RBP2.24□□□□□ -2.05
RUD3YOR216C UBC1P21734 215 aaKnown RBP2.24□□□□□ -2.05
RUD3YOR216C RPC53P25441 422 aa2.24□□□□□ -2.05
RUD3YOR216C ARO2P28777 376 aaKnown RBP2.24□□□□□ -2.05
RUD3YOR216C NPR3P38742 1146 aa2.24□□□□□ -2.05
RUD3YOR216C LRP1P38801 184 aaKnown RBP2.24□□□□□ -2.05
RUD3YOR216C AXL2P38928 823 aa2.24□□□□□ -2.05
RUD3YOR216C PES4P39684 611 aa2.24□□□□□ -2.05
RUD3YOR216C YER010CP40011 234 aa2.24□□□□□ -2.05
RUD3YOR216C SEC24P40482 926 aaKnown RBP2.24□□□□□ -2.05
RUD3YOR216C DPH1P40487 425 aaKnown RBP2.24□□□□□ -2.05
RUD3YOR216C OGG1P53397 376 aaPredicted RBP2.24□□□□□ -2.05
RUD3YOR216C CIK1Q01649 594 aa2.24□□□□□ -2.05
RUD3YOR216C RPT6Q01939 405 aaKnown RBP2.24□□□□□ -2.05
RUD3YOR216C RMT2Q03305 412 aa2.24□□□□□ -2.05
RUD3YOR216C RRN11Q04712 507 aa2.24□□□□□ -2.05
RUD3YOR216C YDR286CQ05530 114 aa2.24□□□□□ -2.05
RUD3YOR216C NBP2Q12163 236 aa2.24□□□□□ -2.05
RUD3YOR216C SKM1Q12469 655 aa2.24□□□□□ -2.05
RUD3YOR216C GCN4P03069 281 aa2.23□□□□□ -2.05
RUD3YOR216C SNF1P06782 633 aaKnown RBP2.23□□□□□ -2.05
RUD3YOR216C FUM1P08417 488 aaKnown RBP2.23□□□□□ -2.05
RUD3YOR216C VMA2P16140 517 aaKnown RBP2.23□□□□□ -2.05
RUD3YOR216C PDX1P16451 410 aa2.23□□□□□ -2.05
RUD3YOR216C SGF29P25554 259 aa2.23□□□□□ -2.05
RUD3YOR216C FRE1P32791 686 aa2.23□□□□□ -2.05
RUD3YOR216C NPL6P32832 435 aa2.23□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms