RNA–Protein interactions for RNA: YOR089C

VPS21, Transcript of Endosomal Rab family GTPase, yeastyeast

Gene VPS21, Length 633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS21YOR089C RPN2P32565 945 aaKnown RBP4.33□□□□□ -1.72
VPS21YOR089C MIA40P36046 403 aa4.33□□□□□ -1.72
VPS21YOR089C RXT2P38255 430 aa4.33□□□□□ -1.72
VPS21YOR089C LTP1P40347 161 aa4.33□□□□□ -1.72
VPS21YOR089C CAK1P43568 368 aaPredicted RBP4.33□□□□□ -1.72
VPS21YOR089C ALK1P43633 760 aaKnown RBP4.33□□□□□ -1.72
VPS21YOR089C ATP22P50273 684 aaPredicted RBP4.33□□□□□ -1.72
VPS21YOR089C BNI5P53890 448 aaKnown RBP4.33□□□□□ -1.72
VPS21YOR089C RPA49Q01080 415 aaPredicted RBP4.33□□□□□ -1.72
VPS21YOR089C TOF2Q02208 771 aa4.33□□□□□ -1.72
VPS21YOR089C SWF1Q04629 336 aa4.33□□□□□ -1.72
VPS21YOR089C TPO3Q06451 622 aa4.33□□□□□ -1.72
VPS21YOR089C BSP1Q06604 576 aa4.33□□□□□ -1.72
VPS21YOR089C MSL5Q12186 476 aaKnown RBP RIP-Chip data4.33□□□□□ -1.72not detected
VPS21YOR089C PAR32Q12515 295 aaKnown RBP4.33□□□□□ -1.72
VPS21YOR089C URA7P28274 579 aaKnown RBP4.32□□□□□ -1.72
VPS21YOR089C TOA1P32773 286 aa4.32□□□□□ -1.72
VPS21YOR089C ARN1P38731 627 aa4.32□□□□□ -1.72
VPS21YOR089C SEC28P40509 296 aaKnown RBP4.32□□□□□ -1.72
VPS21YOR089C FMS1P50264 508 aa4.32□□□□□ -1.72
VPS21YOR089C YGR126WP53274 230 aa4.32□□□□□ -1.72
VPS21YOR089C OAZ1Q02803 292 aa4.32□□□□□ -1.72
VPS21YOR089C HOT1Q03213 719 aa4.32□□□□□ -1.72
VPS21YOR089C SNU56Q03782 492 aaKnown RBP4.32□□□□□ -1.72
VPS21YOR089C GYL1Q04322 720 aa4.32□□□□□ -1.72
VPS21YOR089C RRP45Q05636 305 aaKnown RBP4.32□□□□□ -1.72
VPS21YOR089C SUT2Q12286 268 aa4.32□□□□□ -1.72
VPS21YOR089C RAD9P14737 1309 aa4.31□□□□□ -1.72
VPS21YOR089C PUT2P07275 575 aa4.31□□□□□ -1.72
VPS21YOR089C RPL31BP0C2H9 113 aaKnown RBP4.31□□□□□ -1.72
VPS21YOR089C CLB2P24869 491 aa4.31□□□□□ -1.72
VPS21YOR089C BUD14P27637 709 aa4.31□□□□□ -1.72
VPS21YOR089C PUP2P32379 260 aa4.31□□□□□ -1.72
VPS21YOR089C ANP1P32629 500 aa4.31□□□□□ -1.72
VPS21YOR089C ECM32P32644 1121 aaKnown RBP4.31□□□□□ -1.72
VPS21YOR089C YME2P32843 850 aa4.31□□□□□ -1.72
VPS21YOR089C RPS0AP32905 252 aaKnown RBP4.31□□□□□ -1.72
VPS21YOR089C CUE2P36075 443 aaKnown RBP4.31□□□□□ -1.72
VPS21YOR089C CIN1P40987 1014 aa4.31□□□□□ -1.72
VPS21YOR089C CAF130P53280 1122 aaPredicted RBP4.31□□□□□ -1.72
VPS21YOR089C RSM23Q01163 450 aa4.31□□□□□ -1.72
VPS21YOR089C PEX25Q02969 394 aa4.31□□□□□ -1.72
VPS21YOR089C SOV1Q04748 898 aa4.31□□□□□ -1.72
VPS21YOR089C ORM2Q06144 216 aa4.31□□□□□ -1.72
VPS21YOR089C MED2Q12124 431 aa4.31□□□□□ -1.72
VPS21YOR089C CTF3Q12748 733 aa4.31□□□□□ -1.72
VPS21YOR089C CHO1P08456 276 aa4.3□□□□□ -1.72
VPS21YOR089C SPS4P09937 338 aa4.3□□□□□ -1.72
VPS21YOR089C GAC1P28006 793 aa4.3□□□□□ -1.72
VPS21YOR089C RAD14P28519 371 aa4.3□□□□□ -1.72
VPS21YOR089C MGM1P32266 881 aa4.3□□□□□ -1.72
VPS21YOR089C HXT3P32466 567 aaKnown RBP4.3□□□□□ -1.72
VPS21YOR089C SWH1P35845 1188 aa4.3□□□□□ -1.72
VPS21YOR089C STV1P37296 890 aa4.3□□□□□ -1.72
VPS21YOR089C IMD2P38697 523 aaKnown RBP4.3□□□□□ -1.72
VPS21YOR089C LCB2P40970 561 aa4.3□□□□□ -1.72
VPS21YOR089C CDC1P40986 491 aa4.3□□□□□ -1.72
VPS21YOR089C YJL107CP42947 387 aa4.3□□□□□ -1.72
VPS21YOR089C IRC7P43623 340 aa4.3□□□□□ -1.72
VPS21YOR089C IMD3P50095 523 aaKnown RBP4.3□□□□□ -1.72
VPS21YOR089C YGL138CP53122 345 aa4.3□□□□□ -1.72
VPS21YOR089C YGR016WP53209 190 aa4.3□□□□□ -1.72
VPS21YOR089C EOS1P53938 366 aa4.3□□□□□ -1.72
VPS21YOR089C SKO1Q02100 647 aa4.3□□□□□ -1.72
VPS21YOR089C ARX1Q03862 593 aaKnown RBP4.3□□□□□ -1.72
VPS21YOR089C PIG1Q06216 648 aa4.3□□□□□ -1.72
VPS21YOR089C ATG26Q06321 1198 aa4.3□□□□□ -1.72
VPS21YOR089C RTT109Q07794 436 aa4.3□□□□□ -1.72
VPS21YOR089C HSP42Q12329 375 aa4.3□□□□□ -1.72
VPS21YOR089C GPA1P08539 472 aa4.29□□□□□ -1.72
VPS21YOR089C APE1P14904 514 aa4.29□□□□□ -1.72
VPS21YOR089C RPB8P20436 146 aa4.29□□□□□ -1.72
VPS21YOR089C ADY2P25613 283 aa4.29□□□□□ -1.72
VPS21YOR089C LTV1P34078 463 aa4.29□□□□□ -1.72
VPS21YOR089C TUL1P36096 758 aa4.29□□□□□ -1.72
VPS21YOR089C YKL023WP36103 277 aaKnown RBP4.29□□□□□ -1.72
VPS21YOR089C PXL1P36166 706 aa4.29□□□□□ -1.72
VPS21YOR089C ANS1P38832 159 aa4.29□□□□□ -1.72
VPS21YOR089C RIX1P38883 763 aaPredicted RBP4.29□□□□□ -1.72
VPS21YOR089C ERV46P39727 415 aa4.29□□□□□ -1.72
VPS21YOR089C BPL1P48445 690 aaPredicted RBP4.29□□□□□ -1.72
VPS21YOR089C CUL3P53202 744 aa4.29□□□□□ -1.72
VPS21YOR089C YGR111WP53265 400 aa4.29□□□□□ -1.72
VPS21YOR089C FMP45Q07651 309 aa4.29□□□□□ -1.72
VPS21YOR089C FRE3Q08905 711 aa4.29□□□□□ -1.72
VPS21YOR089C SPE3Q12074 293 aaKnown RBP4.29□□□□□ -1.72
VPS21YOR089C CFT2Q12102 859 aaPredicted RBP4.29□□□□□ -1.72
VPS21YOR089C PUF2Q12221 1075 aaKnown RBP RIP-Chip data4.29□□□□□ -1.72not detected
VPS21YOR089C CFT1Q06632 1357 aaKnown RBP4.28□□□□□ -1.72
VPS21YOR089C RHO2P06781 192 aa4.28□□□□□ -1.72
VPS21YOR089C PRP2P20095 876 aaPredicted RBP4.28□□□□□ -1.72
VPS21YOR089C KRR1P25586 316 aaPredicted RBP4.28□□□□□ -1.72
VPS21YOR089C IDH2P28241 369 aaKnown RBP4.28□□□□□ -1.72
VPS21YOR089C RML2P32611 393 aa4.28□□□□□ -1.72
VPS21YOR089C SHP1P34223 423 aa4.28□□□□□ -1.72
VPS21YOR089C NET1P47035 1189 aa4.28□□□□□ -1.72
VPS21YOR089C TCB2P48231 1178 aa4.28□□□□□ -1.72
VPS21YOR089C YGR149WP48236 432 aa4.28□□□□□ -1.72
VPS21YOR089C LYS20P48570 428 aaKnown RBP4.28□□□□□ -1.72
VPS21YOR089C BTN2P53286 410 aa4.28□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms