RNA–Protein interactions for RNA: YMR231W

PEP5, Transcript of Histone E3 ligase, component of CORVET membrane tethering complex, yeast

Gene PEP5, Length 3,090 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PEP5	YMR231W	CCA1	P21269	546 aa		4.25	□□□□□ -1.73
PEP5	YMR231W	AFT1	P22149	690 aa		4.25	□□□□□ -1.73
PEP5	YMR231W	MSM1	P22438	575 aa		4.25	□□□□□ -1.73
PEP5	YMR231W	DBP2	P24783	546 aa	Known RBP	4.25	□□□□□ -1.73
PEP5	YMR231W	YCL068C	P25593	260 aa		4.25	□□□□□ -1.73
PEP5	YMR231W	CMK1	P27466	446 aa	Known RBP	4.25	□□□□□ -1.73
PEP5	YMR231W	YBR056W	P38081	501 aa		4.25	□□□□□ -1.73
PEP5	YMR231W	DSF2	P38213	736 aa		4.25	□□□□□ -1.73
PEP5	YMR231W	OCA5	P38738	679 aa		4.25	□□□□□ -1.73
PEP5	YMR231W	VMA22	P38784	181 aa		4.25	□□□□□ -1.73
PEP5	YMR231W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.25	□□□□□ -1.73	not detected
PEP5	YMR231W	XDJ1	P39102	459 aa		4.25	□□□□□ -1.73
PEP5	YMR231W	ESL1	P40456	1118 aa		4.25	□□□□□ -1.73
PEP5	YMR231W	TED1	P40533	473 aa		4.25	□□□□□ -1.73
PEP5	YMR231W	GSM1	P42950	618 aa		4.25	□□□□□ -1.73
PEP5	YMR231W	NUP85	P46673	744 aa		4.25	□□□□□ -1.73
PEP5	YMR231W	RMI1	Q02685	241 aa		4.25	□□□□□ -1.73
PEP5	YMR231W	YMR321C	Q04898	105 aa		4.25	□□□□□ -1.73
PEP5	YMR231W	YOR059C	Q08448	450 aa	Known RBP	4.25	□□□□□ -1.73
PEP5	YMR231W	GTT2	Q12390	233 aa		4.25	□□□□□ -1.73
PEP5	YMR231W	TIF6	Q12522	245 aa	Known RBP	4.25	□□□□□ -1.73
PEP5	YMR231W	EFG1	Q3E705	233 aa	Known RBP	4.25	□□□□□ -1.73
PEP5	YMR231W	CCP1	P00431	361 aa		4.24	□□□□□ -1.73
PEP5	YMR231W	MET17	P06106	444 aa		4.24	□□□□□ -1.73
PEP5	YMR231W	SAM1	P10659	382 aa	Known RBP	4.24	□□□□□ -1.73
PEP5	YMR231W	ENA1	P13587	1091 aa		4.24	□□□□□ -1.73
PEP5	YMR231W	VID24	P38263	362 aa		4.24	□□□□□ -1.73
PEP5	YMR231W	HSL7	P38274	827 aa		4.24	□□□□□ -1.73
PEP5	YMR231W	FKH2	P41813	862 aa		4.24	□□□□□ -1.73
PEP5	YMR231W	GCV1	P48015	400 aa		4.24	□□□□□ -1.73
PEP5	YMR231W	RAI1	P53063	387 aa	Known RBP	4.24	□□□□□ -1.73
PEP5	YMR231W	SIW14	P53965	281 aa		4.24	□□□□□ -1.73
PEP5	YMR231W	HXT11	P54862	567 aa		4.24	□□□□□ -1.73
PEP5	YMR231W	ENA2	Q01896	1091 aa		4.24	□□□□□ -1.73
PEP5	YMR231W	DOT1	Q04089	582 aa	Known RBP	4.24	□□□□□ -1.73
PEP5	YMR231W	HPT1	Q04178	221 aa	Known RBP	4.24	□□□□□ -1.73
PEP5	YMR231W	DBP9	Q06218	594 aa	Known RBP	4.24	□□□□□ -1.73
PEP5	YMR231W	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	4.24	□□□□□ -1.73	not detected
PEP5	YMR231W	TYW1	Q08960	810 aa	Known RBP	4.24	□□□□□ -1.73
PEP5	YMR231W	MLH3	Q12083	715 aa		4.24	□□□□□ -1.73
PEP5	YMR231W	YGK3	Q12222	375 aa	Predicted RBP	4.24	□□□□□ -1.73
PEP5	YMR231W	ENA5	Q12691	1091 aa		4.24	□□□□□ -1.73
PEP5	YMR231W	TDH1	P00360	332 aa	Known RBP	4.24	□□□□□ -1.73
PEP5	YMR231W	FBP1	P09201	348 aa		4.24	□□□□□ -1.73
PEP5	YMR231W	PEX3	P28795	441 aa		4.24	□□□□□ -1.73
PEP5	YMR231W	HXT3	P32466	567 aa	Known RBP	4.24	□□□□□ -1.73
PEP5	YMR231W	COX13	P32799	129 aa		4.24	□□□□□ -1.73
PEP5	YMR231W	ZRT3	P34240	503 aa		4.24	□□□□□ -1.73
PEP5	YMR231W	GPT2	P36148	743 aa		4.24	□□□□□ -1.73
PEP5	YMR231W	TDP1	P38319	544 aa		4.24	□□□□□ -1.73
PEP5	YMR231W	PLB1	P39105	664 aa		4.24	□□□□□ -1.73
PEP5	YMR231W	YER034W	P40022	185 aa	Known RBP	4.24	□□□□□ -1.73
PEP5	YMR231W	MPM1	P40364	252 aa		4.24	□□□□□ -1.73
PEP5	YMR231W	MNN5	P46982	586 aa		4.24	□□□□□ -1.73
PEP5	YMR231W	MDV1	P47025	714 aa		4.24	□□□□□ -1.73
PEP5	YMR231W	BOL2	P53082	120 aa		4.24	□□□□□ -1.73
PEP5	YMR231W	MRH4	P53166	561 aa		4.24	□□□□□ -1.73
PEP5	YMR231W	VAC7	P53950	1165 aa		4.24	□□□□□ -1.73
PEP5	YMR231W	VHS1	Q03785	461 aa		4.24	□□□□□ -1.73
PEP5	YMR231W	YLR345W	Q06137	509 aa		4.24	□□□□□ -1.73
PEP5	YMR231W	TRM8	Q12009	286 aa		4.24	□□□□□ -1.73
PEP5	YMR231W	THP2	O13539	261 aa	Known RBP	4.23	□□□□□ -1.73
PEP5	YMR231W	CYC1	P00044	109 aa	Predicted RBP	4.23	□□□□□ -1.73
PEP5	YMR231W	PPH22	P23595	377 aa		4.23	□□□□□ -1.73
PEP5	YMR231W	RRP7	P25368	297 aa	Predicted RBP	4.23	□□□□□ -1.73
PEP5	YMR231W	NDI1	P32340	513 aa		4.23	□□□□□ -1.73
PEP5	YMR231W	DSS4	P32601	143 aa		4.23	□□□□□ -1.73
PEP5	YMR231W	PTC1	P35182	281 aa		4.23	□□□□□ -1.73
PEP5	YMR231W	TAF14	P35189	244 aa		4.23	□□□□□ -1.73
PEP5	YMR231W	SPC34	P36131	295 aa		4.23	□□□□□ -1.73
PEP5	YMR231W	YBR053C	P38235	358 aa		4.23	□□□□□ -1.73
PEP5	YMR231W	YBR071W	P38243	211 aa		4.23	□□□□□ -1.73
PEP5	YMR231W	YHL041W	P38730	149 aa		4.23	□□□□□ -1.73
PEP5	YMR231W	DUN1	P39009	513 aa		4.23	□□□□□ -1.73
PEP5	YMR231W	SCW11	P53189	542 aa		4.23	□□□□□ -1.73
PEP5	YMR231W	PET117	Q02771	107 aa		4.23	□□□□□ -1.73
PEP5	YMR231W	MUS81	Q04149	632 aa	Predicted RBP	4.23	□□□□□ -1.73
PEP5	YMR231W	YPQ2	Q06328	317 aa		4.23	□□□□□ -1.73
PEP5	YMR231W	SGT1	Q08446	395 aa		4.23	□□□□□ -1.73
PEP5	YMR231W	ACF2	Q12168	779 aa		4.23	□□□□□ -1.73
PEP5	YMR231W	FRT1	Q99332	602 aa		4.23	□□□□□ -1.73
PEP5	YMR231W	RPS9A	O13516	197 aa	Known RBP	4.23	□□□□□ -1.73
PEP5	YMR231W	HXK2	P04807	486 aa	Known RBP	4.23	□□□□□ -1.73
PEP5	YMR231W	ARP2	P32381	391 aa	Known RBP	4.23	□□□□□ -1.73
PEP5	YMR231W	VMA8	P32610	256 aa	Known RBP	4.23	□□□□□ -1.73
PEP5	YMR231W	SLX5	P32828	619 aa	Known RBP	4.23	□□□□□ -1.73
PEP5	YMR231W	MRPL17	P36528	281 aa		4.23	□□□□□ -1.73
PEP5	YMR231W	STP2	P38704	541 aa		4.23	□□□□□ -1.73
PEP5	YMR231W	YHR219W	P38900	624 aa		4.23	□□□□□ -1.73
PEP5	YMR231W	FAA3	P39002	694 aa		4.23	□□□□□ -1.73
PEP5	YMR231W	YER156C	P40093	338 aa	Known RBP	4.23	□□□□□ -1.73
PEP5	YMR231W	GID8	P40208	455 aa		4.23	□□□□□ -1.73
PEP5	YMR231W	YIR007W	P40566	764 aa		4.23	□□□□□ -1.73
PEP5	YMR231W	ASG7	P46993	209 aa		4.23	□□□□□ -1.73
PEP5	YMR231W	SSY5	P47002	699 aa		4.23	□□□□□ -1.73
PEP5	YMR231W	LSM1	P47017	172 aa	Known RBP	4.23	□□□□□ -1.73
PEP5	YMR231W	VTC4	P47075	721 aa		4.23	□□□□□ -1.73
PEP5	YMR231W	YJL007C	P47080	104 aa		4.23	□□□□□ -1.73
PEP5	YMR231W	COG1	P53079	417 aa		4.23	□□□□□ -1.73
PEP5	YMR231W	YGR053C	P53234	283 aa		4.23	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 60.9 ms