RNA–Protein interactions for RNA: YMR107W

SPG4, Transcript of Protein required for high temperature survival during stationary phase, yeastyeast

Gene SPG4, Length 348 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPG4YMR107W NCS6P53088 359 aa5.21□□□□□ -1.58
SPG4YMR107W DAM1P53267 343 aa5.21□□□□□ -1.58
SPG4YMR107W YGR168CP53293 376 aa5.21□□□□□ -1.58
SPG4YMR107W BSC5P53755 489 aa5.21□□□□□ -1.58
SPG4YMR107W IPI3P53877 555 aa5.21□□□□□ -1.58
SPG4YMR107W DID2P69771 204 aa5.21□□□□□ -1.58
SPG4YMR107W MTD1Q02046 320 aaKnown RBP5.21□□□□□ -1.58
SPG4YMR107W SMA1Q02651 245 aa5.21□□□□□ -1.58
SPG4YMR107W ECM11Q04110 302 aa5.21□□□□□ -1.58
SPG4YMR107W RNH1Q04740 348 aa5.21□□□□□ -1.58
SPG4YMR107W HEL2Q05580 639 aaKnown RBP5.21□□□□□ -1.58
SPG4YMR107W PHM6Q05637 104 aa5.21□□□□□ -1.58
SPG4YMR107W ECM38Q05902 660 aaPredicted RBP5.21□□□□□ -1.58
SPG4YMR107W ISR1Q06098 443 aaKnown RBP5.21□□□□□ -1.58
SPG4YMR107W RSC2Q06488 889 aa5.21□□□□□ -1.58
SPG4YMR107W DIB1Q06819 143 aaPredicted RBP5.21□□□□□ -1.58
SPG4YMR107W BDS1Q08347 646 aa5.21□□□□□ -1.58
SPG4YMR107W HRK1Q08732 759 aaKnown RBP5.21□□□□□ -1.58
SPG4YMR107W YPR022CQ12139 1133 aa5.21□□□□□ -1.58
SPG4YMR107W HAL9Q12180 1030 aa5.21□□□□□ -1.58
SPG4YMR107W ATG34Q12292 412 aa5.21□□□□□ -1.58
SPG4YMR107W SNU23Q12368 194 aaPredicted RBP5.21□□□□□ -1.58
SPG4YMR107W TY1A-DR3Q12441 440 aa5.21□□□□□ -1.58
SPG4YMR107W SEC53P07283 254 aaKnown RBP5.2□□□□□ -1.58
SPG4YMR107W ATP12P22135 325 aa5.2□□□□□ -1.58
SPG4YMR107W YCK1P23291 538 aa5.2□□□□□ -1.58
SPG4YMR107W KIN82P25341 720 aa5.2□□□□□ -1.58
SPG4YMR107W PEX34P25584 144 aa5.2□□□□□ -1.58
SPG4YMR107W TAH1P25638 111 aaPredicted RBP5.2□□□□□ -1.58
SPG4YMR107W DPH2P32461 534 aa5.2□□□□□ -1.58
SPG4YMR107W SMI1P32566 505 aa5.2□□□□□ -1.58
SPG4YMR107W LIP5P32875 414 aa5.2□□□□□ -1.58
SPG4YMR107W PIN4P34217 668 aaKnown RBP RIP-Chip data5.2□□□□□ -1.58not detected
SPG4YMR107W ABZ1P37254 787 aaPredicted RBP5.2□□□□□ -1.58
SPG4YMR107W YBL029WP38201 376 aa5.2□□□□□ -1.58
SPG4YMR107W CBR1P38626 284 aaKnown RBP5.2□□□□□ -1.58
SPG4YMR107W YHR033WP38690 423 aa5.2□□□□□ -1.58
SPG4YMR107W NMD3P38861 518 aaKnown RBP5.2□□□□□ -1.58
SPG4YMR107W NAB3P38996 802 aaKnown RBP RIP-Chip data5.2□□□□□ -1.58not detected
SPG4YMR107W RBG1P39729 369 aa5.2□□□□□ -1.58
SPG4YMR107W COA1P40452 197 aa5.2□□□□□ -1.58
SPG4YMR107W YJL218WP40892 196 aaKnown RBP5.2□□□□□ -1.58
SPG4YMR107W PHB1P40961 287 aa5.2□□□□□ -1.58
SPG4YMR107W MAF1P41910 395 aa5.2□□□□□ -1.58
SPG4YMR107W SER2P42941 309 aa5.2□□□□□ -1.58
SPG4YMR107W GND2P53319 492 aa5.2□□□□□ -1.58
SPG4YMR107W MRPL50P53724 139 aa5.2□□□□□ -1.58
SPG4YMR107W INN1P53901 409 aa5.2□□□□□ -1.58
SPG4YMR107W SLG1P54867 378 aa5.2□□□□□ -1.58
SPG4YMR107W CEG1Q01159 459 aaPredicted RBP5.2□□□□□ -1.58
SPG4YMR107W RSC4Q02206 625 aa5.2□□□□□ -1.58
SPG4YMR107W CSN9Q03981 162 aa5.2□□□□□ -1.58
SPG4YMR107W TRM12Q04235 462 aa5.2□□□□□ -1.58
SPG4YMR107W MFB1Q04922 465 aa5.2□□□□□ -1.58
SPG4YMR107W YLR345WQ06137 509 aa5.2□□□□□ -1.58
SPG4YMR107W YLR352WQ06479 807 aa5.2□□□□□ -1.58
SPG4YMR107W GRS2Q06817 618 aa5.2□□□□□ -1.58
SPG4YMR107W TPO1Q07824 586 aa5.2□□□□□ -1.58
SPG4YMR107W RSC58Q07979 502 aa5.2□□□□□ -1.58
SPG4YMR107W GSH2Q08220 491 aa5.2□□□□□ -1.58
SPG4YMR107W HFI1Q12060 488 aa5.2□□□□□ -1.58
SPG4YMR107W LYS21Q12122 440 aaKnown RBP5.2□□□□□ -1.58
SPG4YMR107W WTM1Q12363 437 aaKnown RBP5.2□□□□□ -1.58
SPG4YMR107W PFK27Q12471 397 aaPredicted RBP5.2□□□□□ -1.58
SPG4YMR107W IZH4Q99393 312 aa5.2□□□□□ -1.58
SPG4YMR107W RAD7P06779 565 aa5.19□□□□□ -1.58
SPG4YMR107W YER152CP10356 443 aa5.19□□□□□ -1.58
SPG4YMR107W CAP2P13517 287 aa5.19□□□□□ -1.58
SPG4YMR107W SAR1P20606 190 aaKnown RBP5.19□□□□□ -1.58
SPG4YMR107W RPL24BP24000 155 aaKnown RBP5.19□□□□□ -1.58
SPG4YMR107W CWH43P25618 953 aa5.19□□□□□ -1.58
SPG4YMR107W RTG2P32608 588 aaKnown RBP5.19□□□□□ -1.58
SPG4YMR107W COT1P32798 439 aa5.19□□□□□ -1.58
SPG4YMR107W SKG6P32900 734 aaPredicted RBP5.19□□□□□ -1.58
SPG4YMR107W MSN2P33748 704 aa5.19□□□□□ -1.58
SPG4YMR107W TOD6P34219 525 aa5.19□□□□□ -1.58
SPG4YMR107W ATG19P35193 415 aa5.19□□□□□ -1.58
SPG4YMR107W HSL7P38274 827 aa5.19□□□□□ -1.58
SPG4YMR107W SOH1P38633 127 aa5.19□□□□□ -1.58
SPG4YMR107W OSH7P38755 437 aa5.19□□□□□ -1.58
SPG4YMR107W YHR078WP38799 552 aa5.19□□□□□ -1.58
SPG4YMR107W GEP4P38812 185 aa5.19□□□□□ -1.58
SPG4YMR107W YAP1801P38856 637 aa5.19□□□□□ -1.58
SPG4YMR107W MNN1P39106 762 aa5.19□□□□□ -1.58
SPG4YMR107W PHM8P40025 321 aa5.19□□□□□ -1.58
SPG4YMR107W THO1P40040 218 aaKnown RBP5.19□□□□□ -1.58
SPG4YMR107W RRT5P43607 289 aa5.19□□□□□ -1.58
SPG4YMR107W GLG2P47011 380 aa5.19□□□□□ -1.58
SPG4YMR107W APS3P47064 194 aa5.19□□□□□ -1.58
SPG4YMR107W YJR154WP47181 346 aa5.19□□□□□ -1.58
SPG4YMR107W UBC12P52491 188 aa5.19□□□□□ -1.58
SPG4YMR107W MPS2P53159 387 aa5.19□□□□□ -1.58
SPG4YMR107W NOP13P53883 403 aaKnown RBP RIP-Chip data5.19□□□□□ -1.58not detected
SPG4YMR107W PEX13P80667 386 aa5.19□□□□□ -1.58
SPG4YMR107W NAM8Q00539 523 aaKnown RBP5.19□□□□□ -1.58
SPG4YMR107W YPL071CQ02864 156 aa5.19□□□□□ -1.58
SPG4YMR107W EFR3Q03653 782 aaKnown RBP5.19□□□□□ -1.58
SPG4YMR107W MUS81Q04149 632 aaPredicted RBP5.19□□□□□ -1.58
SPG4YMR107W APC4Q04601 652 aa5.19□□□□□ -1.58
SPG4YMR107W YLR346CQ06139 101 aa5.19□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms