RNA–Protein interactions for RNA: YMR046C

YMR046C, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YMR046C, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YMR046CYMR046C ATG27P46989 271 aa3.31□□□□□ -1.88
YMR046CYMR046C SYF1Q04048 859 aaPredicted RBP3.31□□□□□ -1.88
YMR046CYMR046C DIC1Q06143 298 aa3.31□□□□□ -1.88
YMR046CYMR046C YDL057WQ07379 328 aa3.31□□□□□ -1.88
YMR046CYMR046C RLM1Q12224 676 aa3.31□□□□□ -1.88
YMR046CYMR046C PGA3Q12746 312 aaKnown RBP3.31□□□□□ -1.88
YMR046CYMR046C MET5P47169 1442 aa3.31□□□□□ -1.88
YMR046CYMR046C MET17P06106 444 aa3.3□□□□□ -1.88
YMR046CYMR046C BAR1P12630 587 aa3.3□□□□□ -1.88
YMR046CYMR046C SUI2P20459 304 aaKnown RBP3.3□□□□□ -1.88
YMR046CYMR046C ERG3P32353 365 aa3.3□□□□□ -1.88
YMR046CYMR046C RPN2P32565 945 aaKnown RBP3.3□□□□□ -1.88
YMR046CYMR046C NFU1P32860 256 aa3.3□□□□□ -1.88
YMR046CYMR046C TRS65P32893 560 aa3.3□□□□□ -1.88
YMR046CYMR046C YKL023WP36103 277 aaKnown RBP3.3□□□□□ -1.88
YMR046CYMR046C MIC60P36112 540 aa3.3□□□□□ -1.88
YMR046CYMR046C SPC34P36131 295 aa3.3□□□□□ -1.88
YMR046CYMR046C MET18P40469 1032 aa3.3□□□□□ -1.88
YMR046CYMR046C STB2P46679 850 aa3.3□□□□□ -1.88
YMR046CYMR046C BUD32P53323 261 aa3.3□□□□□ -1.88
YMR046CYMR046C JJJ1P53863 590 aa3.3□□□□□ -1.88
YMR046CYMR046C SHR3Q02774 210 aa3.3□□□□□ -1.88
YMR046CYMR046C MSS11Q03825 758 aa3.3□□□□□ -1.88
YMR046CYMR046C COQ9Q05779 260 aa3.3□□□□□ -1.88
YMR046CYMR046C NCE102Q12207 173 aaRIP-Chip data3.3□□□□□ -1.88not detected
YMR046CYMR046C CSR2Q12734 1121 aa3.3□□□□□ -1.88
YMR046CYMR046C TSC11P40061 1430 aa3.3□□□□□ -1.88
YMR046CYMR046C ESC1Q03661 1658 aaKnown RBP3.3□□□□□ -1.88
YMR046CYMR046C PEP5P12868 1029 aa3.29□□□□□ -1.88
YMR046CYMR046C GLN3P18494 730 aa3.29□□□□□ -1.88
YMR046CYMR046C FUR1P18562 216 aaKnown RBP3.29□□□□□ -1.88
YMR046CYMR046C SGV1P23293 657 aaKnown RBP3.29□□□□□ -1.88
YMR046CYMR046C ACH1P32316 526 aa3.29□□□□□ -1.88
YMR046CYMR046C WBP1P33767 430 aaKnown RBP3.29□□□□□ -1.88
YMR046CYMR046C VID24P38263 362 aa3.29□□□□□ -1.88
YMR046CYMR046C MSR1P38714 643 aa3.29□□□□□ -1.88
YMR046CYMR046C BZZ1P38822 633 aa3.29□□□□□ -1.88
YMR046CYMR046C YER130CP39959 443 aa3.29□□□□□ -1.88
YMR046CYMR046C YIR014WP40570 242 aa3.29□□□□□ -1.88
YMR046CYMR046C TDA7P53882 636 aaPredicted RBP3.29□□□□□ -1.88
YMR046CYMR046C FIN1Q03898 291 aa3.29□□□□□ -1.88
YMR046CYMR046C FMP45Q07651 309 aa3.29□□□□□ -1.88
YMR046CYMR046C PDH1Q12428 516 aaKnown RBP3.29□□□□□ -1.88
YMR046CYMR046C GRX6Q12438 231 aa3.29□□□□□ -1.88
YMR046CYMR046C RTN2Q12443 393 aa3.29□□□□□ -1.88
YMR046CYMR046C ARP6Q12509 438 aa3.29□□□□□ -1.88
YMR046CYMR046C TY2B-LR1P0C2J3 1770 aa3.29□□□□□ -1.88
YMR046CYMR046C TY2B-FP0CX63 1770 aa3.29□□□□□ -1.88
YMR046CYMR046C TY2B-GR2P0CX64 1770 aa3.29□□□□□ -1.88
YMR046CYMR046C TY2B-CP25384 1770 aa3.29□□□□□ -1.88
YMR046CYMR046C TY2B-DR2Q03494 1770 aa3.29□□□□□ -1.88
YMR046CYMR046C TY1B-DR1Q03855 1755 aa3.29□□□□□ -1.88
YMR046CYMR046C TY2B-DR3Q07791 1770 aaKnown RBP3.29□□□□□ -1.88
YMR046CYMR046C TY2B-OR1Q12113 1770 aa3.29□□□□□ -1.88
YMR046CYMR046C TY2B-DR1Q12472 1770 aa3.29□□□□□ -1.88
YMR046CYMR046C TY2B-OR2Q12501 1770 aa3.29□□□□□ -1.88
YMR046CYMR046C VTH1P40438 1549 aa3.28□□□□□ -1.88
YMR046CYMR046C VTH2P40890 1549 aa3.28□□□□□ -1.88
YMR046CYMR046C PEP4P07267 405 aaKnown RBP3.28□□□□□ -1.88
YMR046CYMR046C TYR1P20049 452 aa3.28□□□□□ -1.88
YMR046CYMR046C ELO2P25358 347 aa3.28□□□□□ -1.88
YMR046CYMR046C PRD1P25375 712 aa3.28□□□□□ -1.88
YMR046CYMR046C ERG1P32476 496 aaKnown RBP3.28□□□□□ -1.88
YMR046CYMR046C YME1P32795 747 aa3.28□□□□□ -1.88
YMR046CYMR046C CST26P38226 397 aa3.28□□□□□ -1.88
YMR046CYMR046C MUM2P38236 366 aa3.28□□□□□ -1.88
YMR046CYMR046C YHR210CP38893 341 aa3.28□□□□□ -1.88
YMR046CYMR046C GUF1P46943 645 aa3.28□□□□□ -1.88
YMR046CYMR046C PET130P47065 347 aa3.28□□□□□ -1.88
YMR046CYMR046C SAM50P53969 484 aa3.28□□□□□ -1.88
YMR046CYMR046C RHO4Q00246 291 aa3.28□□□□□ -1.88
YMR046CYMR046C TOF2Q02208 771 aa3.28□□□□□ -1.88
YMR046CYMR046C YDR239CQ03780 787 aa3.28□□□□□ -1.88
YMR046CYMR046C GRS2Q06817 618 aa3.28□□□□□ -1.88
YMR046CYMR046C RIM20Q12033 661 aa3.28□□□□□ -1.88
YMR046CYMR046C RRG1Q12167 365 aaPredicted RBP3.28□□□□□ -1.88
YMR046CYMR046C CDC23P16522 626 aa3.27□□□□□ -1.89
YMR046CYMR046C MRE11P32829 692 aa3.27□□□□□ -1.89
YMR046CYMR046C SHP1P34223 423 aa3.27□□□□□ -1.89
YMR046CYMR046C RRP3P38712 501 aaKnown RBP3.27□□□□□ -1.89
YMR046CYMR046C SMF1P38925 575 aa3.27□□□□□ -1.89
YMR046CYMR046C LSM5P40089 93 aaKnown RBP3.27□□□□□ -1.89
YMR046CYMR046C AIM22P47051 409 aa3.27□□□□□ -1.89
YMR046CYMR046C DRN1P53255 507 aaKnown RBP3.27□□□□□ -1.89
YMR046CYMR046C RBA50Q04418 439 aa3.27□□□□□ -1.89
YMR046CYMR046C GLO2Q05584 274 aa3.27□□□□□ -1.89
YMR046CYMR046C MRD1Q06106 887 aaKnown RBP3.27□□□□□ -1.89
YMR046CYMR046C THP1Q08231 455 aa3.27□□□□□ -1.89
YMR046CYMR046C YOR365CQ08844 703 aa3.27□□□□□ -1.89
YMR046CYMR046C ATG29Q12092 213 aa3.27□□□□□ -1.89
YMR046CYMR046C ERP4Q12450 207 aa3.27□□□□□ -1.89
YMR046CYMR046C LTE1P07866 1435 aa3.26□□□□□ -1.89
YMR046CYMR046C TY2B-BQ12491 1770 aa3.26□□□□□ -1.89
YMR046CYMR046C RAD52P06778 471 aaKnown RBP3.26□□□□□ -1.89
YMR046CYMR046C PAP1P29468 568 aaKnown RBP3.26□□□□□ -1.89
YMR046CYMR046C SEC1P30619 724 aaKnown RBP3.26□□□□□ -1.89
YMR046CYMR046C GPI10P30777 616 aa3.26□□□□□ -1.89
YMR046CYMR046C VPS17P32913 551 aa3.26□□□□□ -1.89
YMR046CYMR046C ECM15P35195 104 aa3.26□□□□□ -1.89
YMR046CYMR046C RIM2P38127 377 aa3.26□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 42.9 ms