RNA–Protein interactions for RNA: YML029W

USA1, Transcript of Scaffold subunit of the Hrd1p ubiquitin ligase, yeastyeast

Gene USA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USA1YML029W SPS1P08458 490 aa3.79□□□□□ -1.8
USA1YML029W FUR1P18562 216 aaKnown RBP3.79□□□□□ -1.8
USA1YML029W EXO70P19658 623 aa3.79□□□□□ -1.8
USA1YML029W PRP4P20053 465 aaKnown RBP3.79□□□□□ -1.8
USA1YML029W NPP1P25353 742 aa3.79□□□□□ -1.8
USA1YML029W CIN8P27895 1000 aa3.79□□□□□ -1.8
USA1YML029W PTM1P32857 523 aa3.79□□□□□ -1.8
USA1YML029W FRE2P36033 711 aa3.79□□□□□ -1.8
USA1YML029W YPT35P38815 214 aaKnown RBP3.79□□□□□ -1.8
USA1YML029W YHR127WP38833 243 aaKnown RBP3.79□□□□□ -1.8
USA1YML029W GGC1P38988 300 aa3.79□□□□□ -1.8
USA1YML029W TIM17P39515 158 aa3.79□□□□□ -1.8
USA1YML029W COA1P40452 197 aa3.79□□□□□ -1.8
USA1YML029W MET18P40469 1032 aa3.79□□□□□ -1.8
USA1YML029W MNT3P40549 630 aa3.79□□□□□ -1.8
USA1YML029W CCT7P42943 550 aaKnown RBP3.79□□□□□ -1.8
USA1YML029W GAT1P43574 510 aa3.79□□□□□ -1.8
USA1YML029W TY4A-JP47023 414 aa3.79□□□□□ -1.8
USA1YML029W MTR3P48240 250 aaPredicted RBP3.79□□□□□ -1.8
USA1YML029W AIF1P52923 378 aa3.79□□□□□ -1.8
USA1YML029W MRM2P53123 320 aa3.79□□□□□ -1.8
USA1YML029W ARP4P80428 489 aa3.79□□□□□ -1.8
USA1YML029W MUS81Q04149 632 aaPredicted RBP3.79□□□□□ -1.8
USA1YML029W RPC11Q04307 110 aaPredicted RBP3.79□□□□□ -1.8
USA1YML029W SSL1Q04673 461 aaPredicted RBP3.79□□□□□ -1.8
USA1YML029W ENT4Q07872 247 aa3.79□□□□□ -1.8
USA1YML029W ATG29Q12092 213 aa3.79□□□□□ -1.8
USA1YML029W YPL247CQ12523 523 aa3.79□□□□□ -1.8
USA1YML029W RPP2BP02400 110 aaKnown RBP3.79□□□□□ -1.8
USA1YML029W PHO91P27514 894 aa3.79□□□□□ -1.8
USA1YML029W MVD1P32377 396 aaKnown RBP3.79□□□□□ -1.8
USA1YML029W RFC3P38629 340 aa3.79□□□□□ -1.8
USA1YML029W SEC31P38968 1273 aaKnown RBP3.79□□□□□ -1.8
USA1YML029W GIP4P39732 760 aa3.79□□□□□ -1.8
USA1YML029W PAC1P39946 494 aaKnown RBP3.79□□□□□ -1.8
USA1YML029W TIF34P40217 347 aaKnown RBP3.79□□□□□ -1.8
USA1YML029W YGR053CP53234 283 aa3.79□□□□□ -1.8
USA1YML029W FRE4P53746 719 aa3.79□□□□□ -1.8
USA1YML029W FMN1Q03778 218 aa3.79□□□□□ -1.8
USA1YML029W ECM11Q04110 302 aa3.79□□□□□ -1.8
USA1YML029W YFT2Q06676 274 aa3.79□□□□□ -1.8
USA1YML029W VAM6Q07468 1049 aa3.79□□□□□ -1.8
USA1YML029W YEH1Q07804 573 aa3.79□□□□□ -1.8
USA1YML029W ISU2Q12056 156 aa3.79□□□□□ -1.8
USA1YML029W YVC1Q12324 675 aa3.79□□□□□ -1.8
USA1YML029W LAG2Q92325 660 aa3.79□□□□□ -1.8
USA1YML029W PPH21P23594 369 aa3.78□□□□□ -1.8
USA1YML029W YHR033WP38690 423 aa3.78□□□□□ -1.8
USA1YML029W EFM1P38732 585 aa3.78□□□□□ -1.8
USA1YML029W ERV46P39727 415 aa3.78□□□□□ -1.8
USA1YML029W PRM2P40534 656 aa3.78□□□□□ -1.8
USA1YML029W PSA1P41940 361 aaKnown RBP3.78□□□□□ -1.8
USA1YML029W UBP6P43593 499 aaKnown RBP3.78□□□□□ -1.8
USA1YML029W TIM54P47045 478 aa3.78□□□□□ -1.8
USA1YML029W RNR4P49723 345 aaKnown RBP3.78□□□□□ -1.8
USA1YML029W TYW3P53177 273 aa3.78□□□□□ -1.8
USA1YML029W YNL260CP53846 198 aa3.78□□□□□ -1.8
USA1YML029W RMI1Q02685 241 aa3.78□□□□□ -1.8
USA1YML029W GOT1Q03554 138 aa3.78□□□□□ -1.8
USA1YML029W TAF12Q03761 539 aa3.78□□□□□ -1.8
USA1YML029W SPC24Q04477 213 aa3.78□□□□□ -1.8
USA1YML029W BNA5Q05979 453 aa3.78□□□□□ -1.8
USA1YML029W RSC3Q06639 885 aa3.78□□□□□ -1.8
USA1YML029W UPC2Q12151 913 aa3.78□□□□□ -1.8
USA1YML029W YLL054CQ12244 843 aa3.78□□□□□ -1.8
USA1YML029W YDR061WQ12298 539 aa3.78□□□□□ -1.8
USA1YML029W YOL087CQ99247 1116 aa3.78□□□□□ -1.8
USA1YML029W CYT1P07143 309 aa3.78□□□□□ -1.8
USA1YML029W TUB1P09733 447 aaKnown RBP3.78□□□□□ -1.8
USA1YML029W CDC34P14682 295 aa3.78□□□□□ -1.8
USA1YML029W PRP2P20095 876 aaPredicted RBP3.78□□□□□ -1.8
USA1YML029W DBR1P24309 405 aaKnown RBP3.78□□□□□ -1.8
USA1YML029W RSC6P25632 483 aa3.78□□□□□ -1.8
USA1YML029W NTH1P32356 751 aa3.78□□□□□ -1.8
USA1YML029W SFP1P32432 683 aa3.78□□□□□ -1.8
USA1YML029W SRB5P32585 307 aa3.78□□□□□ -1.8
USA1YML029W RMA1P36001 430 aaKnown RBP3.78□□□□□ -1.8
USA1YML029W TRM7P38238 310 aaKnown RBP3.78□□□□□ -1.8
USA1YML029W ARN1P38731 627 aa3.78□□□□□ -1.8
USA1YML029W RSP5P39940 809 aaKnown RBP3.78□□□□□ -1.8
USA1YML029W YIL108WP40483 696 aaKnown RBP3.78□□□□□ -1.8
USA1YML029W GCD10P41814 478 aa3.78□□□□□ -1.8
USA1YML029W TMA22P47089 198 aaPredicted RBP3.78□□□□□ -1.8
USA1YML029W GOR1P53839 350 aa3.78□□□□□ -1.8
USA1YML029W PRO2P54885 456 aaKnown RBP3.78□□□□□ -1.8
USA1YML029W LSM3P57743 89 aaKnown RBP3.78□□□□□ -1.8
USA1YML029W UBP2Q01476 1272 aa3.78□□□□□ -1.8
USA1YML029W YDR338CQ05497 695 aa3.78□□□□□ -1.8
USA1YML029W GGA1Q06336 557 aa3.78□□□□□ -1.8
USA1YML029W OPT2Q06593 877 aa3.78□□□□□ -1.8
USA1YML029W IRC13Q08630 104 aa3.78□□□□□ -1.8
USA1YML029W YPL225WQ08971 146 aaKnown RBP3.78□□□□□ -1.8
USA1YML029W TRM8Q12009 286 aa3.78□□□□□ -1.8
USA1YML029W PMR1P13586 950 aa3.77□□□□□ -1.81
USA1YML029W YCK2P23292 546 aaKnown RBP3.77□□□□□ -1.81
USA1YML029W HOG1P32485 435 aa3.77□□□□□ -1.81
USA1YML029W CDC13P32797 924 aaKnown RBP3.77□□□□□ -1.81
USA1YML029W CBF5P33322 483 aaKnown RBP RIP-Chip data3.77□□□□□ -1.81not detected
USA1YML029W UTP9P38882 575 aaKnown RBP3.77□□□□□ -1.81
USA1YML029W SHU2P38957 223 aa3.77□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 58.7 ms