RNA–Protein interactions for RNA: YKL172W

EBP2, Transcript of Required for 25S rRNA maturation and 60S ribosomal subunit assembly, yeast

Gene EBP2, Length 1,284 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
EBP2	YKL172W	MEP2	P41948	499 aa		4.27	□□□□□ -1.73
EBP2	YKL172W	ROK1	P45818	564 aa	Predicted RBP	4.27	□□□□□ -1.73
EBP2	YKL172W	COQ9	Q05779	260 aa		4.27	□□□□□ -1.73
EBP2	YKL172W	NRT1	Q08485	598 aa		4.27	□□□□□ -1.73
EBP2	YKL172W	SEC39	Q12745	709 aa		4.27	□□□□□ -1.73
EBP2	YKL172W	INH1	P01097	85 aa		4.26	□□□□□ -1.73
EBP2	YKL172W	PMS1	P14242	873 aa		4.26	□□□□□ -1.73
EBP2	YKL172W	PRP2	P20095	876 aa	Predicted RBP	4.26	□□□□□ -1.73
EBP2	YKL172W	SEC1	P30619	724 aa	Known RBP	4.26	□□□□□ -1.73
EBP2	YKL172W	CST26	P38226	397 aa		4.26	□□□□□ -1.73
EBP2	YKL172W	PET130	P47065	347 aa		4.26	□□□□□ -1.73
EBP2	YKL172W	SRB7	P47822	140 aa		4.26	□□□□□ -1.73
EBP2	YKL172W	TWF1	P53250	332 aa		4.26	□□□□□ -1.73
EBP2	YKL172W	CRZ1	P53968	678 aa		4.26	□□□□□ -1.73
EBP2	YKL172W	MDM1	Q01846	1127 aa		4.26	□□□□□ -1.73
EBP2	YKL172W	NDD1	Q08887	554 aa		4.26	□□□□□ -1.73
EBP2	YKL172W	CAR1	P00812	333 aa	Known RBP	4.25	□□□□□ -1.73
EBP2	YKL172W	ARG3	P05150	338 aa		4.25	□□□□□ -1.73
EBP2	YKL172W	YCR007C	P25354	239 aa		4.25	□□□□□ -1.73
EBP2	YKL172W	JNM1	P36224	373 aa		4.25	□□□□□ -1.73
EBP2	YKL172W	BNA4	P38169	460 aa		4.25	□□□□□ -1.73
EBP2	YKL172W	VID24	P38263	362 aa		4.25	□□□□□ -1.73
EBP2	YKL172W	YEL057C	P39983	233 aa		4.25	□□□□□ -1.73
EBP2	YKL172W	BUD32	P53323	261 aa		4.25	□□□□□ -1.73
EBP2	YKL172W	MRPL19	P53875	158 aa		4.25	□□□□□ -1.73
EBP2	YKL172W	HEF3	P53978	1044 aa	Known RBP	4.25	□□□□□ -1.73
EBP2	YKL172W	YDR239C	Q03780	787 aa		4.25	□□□□□ -1.73
EBP2	YKL172W	RBA50	Q04418	439 aa		4.25	□□□□□ -1.73
EBP2	YKL172W	ATG29	Q12092	213 aa		4.25	□□□□□ -1.73
EBP2	YKL172W	CDC31	P06704	161 aa	Known RBP	4.24	□□□□□ -1.73
EBP2	YKL172W	RAD52	P06778	471 aa	Known RBP	4.24	□□□□□ -1.73
EBP2	YKL172W	APE1	P14904	514 aa		4.24	□□□□□ -1.73
EBP2	YKL172W	EXO70	P19658	623 aa		4.24	□□□□□ -1.73
EBP2	YKL172W	CMC1	P36064	111 aa		4.24	□□□□□ -1.73
EBP2	YKL172W	OSH3	P38713	996 aa	Known RBP	4.24	□□□□□ -1.73
EBP2	YKL172W	IKS1	P47042	667 aa		4.24	□□□□□ -1.73
EBP2	YKL172W	AIM22	P47051	409 aa		4.24	□□□□□ -1.73
EBP2	YKL172W	YMR317W	Q04893	1140 aa		4.24	□□□□□ -1.73
EBP2	YKL172W	IVY1	Q04934	453 aa		4.24	□□□□□ -1.73
EBP2	YKL172W	RIM20	Q12033	661 aa		4.24	□□□□□ -1.73
EBP2	YKL172W	DAP1	Q12091	152 aa		4.24	□□□□□ -1.73
EBP2	YKL172W	YDL007C-A	Q2V2Q0	85 aa		4.24	□□□□□ -1.73
EBP2	YKL172W	RAV1	P47104	1357 aa		4.24	□□□□□ -1.73
EBP2	YKL172W	YML002W	P0CF17	737 aa		4.23	□□□□□ -1.73
EBP2	YKL172W	CKA1	P15790	372 aa		4.23	□□□□□ -1.73
EBP2	YKL172W	UTR4	P32626	227 aa		4.23	□□□□□ -1.73
EBP2	YKL172W	SEC66	P33754	206 aa		4.23	□□□□□ -1.73
EBP2	YKL172W	DUG2	P38149	878 aa		4.23	□□□□□ -1.73
EBP2	YKL172W	TCM62	P38228	572 aa	Known RBP	4.23	□□□□□ -1.73
EBP2	YKL172W	OTU2	P38747	307 aa	Known RBP	4.23	□□□□□ -1.73
EBP2	YKL172W	TIF4631	P39935	952 aa	Known RBP	4.23	□□□□□ -1.73
EBP2	YKL172W	MET18	P40469	1032 aa		4.23	□□□□□ -1.73
EBP2	YKL172W	RPM2	Q02773	1202 aa		4.23	□□□□□ -1.73
EBP2	YKL172W	MRD1	Q06106	887 aa	Known RBP	4.23	□□□□□ -1.73
EBP2	YKL172W	LSP1	Q12230	341 aa	Known RBP	4.23	□□□□□ -1.73
EBP2	YKL172W	SUC2	P00724	532 aa		4.22	□□□□□ -1.73
EBP2	YKL172W	COR1	P07256	457 aa		4.22	□□□□□ -1.73
EBP2	YKL172W	MTF1	P14908	341 aa	Known RBP	4.22	□□□□□ -1.73
EBP2	YKL172W	ELO2	P25358	347 aa		4.22	□□□□□ -1.73
EBP2	YKL172W	SIP2	P34164	415 aa	Known RBP	4.22	□□□□□ -1.73
EBP2	YKL172W	MBB1	P39534	108 aa		4.22	□□□□□ -1.73
EBP2	YKL172W	SCD6	P45978	349 aa	Known RBP RIP-Chip data	4.22	□□□□□ -1.73	not detected
EBP2	YKL172W	DRN1	P53255	507 aa	Known RBP	4.22	□□□□□ -1.73
EBP2	YKL172W	CAF130	P53280	1122 aa	Predicted RBP	4.22	□□□□□ -1.73
EBP2	YKL172W	GPI1	P53306	609 aa		4.22	□□□□□ -1.73
EBP2	YKL172W	JJJ1	P53863	590 aa		4.22	□□□□□ -1.73
EBP2	YKL172W	PDS5	Q04264	1277 aa		4.22	□□□□□ -1.73
EBP2	YKL172W	RPC11	Q04307	110 aa	Predicted RBP	4.22	□□□□□ -1.73
EBP2	YKL172W	HCR1	Q05775	265 aa	Known RBP	4.22	□□□□□ -1.73
EBP2	YKL172W	BNA5	Q05979	453 aa		4.22	□□□□□ -1.73
EBP2	YKL172W	YDL009C	Q12210	107 aa		4.22	□□□□□ -1.73
EBP2	YKL172W	RPL31B	P0C2H9	113 aa	Known RBP	4.21	□□□□□ -1.74
EBP2	YKL172W	SGV1	P23293	657 aa	Known RBP	4.21	□□□□□ -1.74
EBP2	YKL172W	PRO3	P32263	286 aa	Known RBP	4.21	□□□□□ -1.74
EBP2	YKL172W	PTR2	P32901	601 aa		4.21	□□□□□ -1.74
EBP2	YKL172W	URB2	P47108	1174 aa		4.21	□□□□□ -1.74
EBP2	YKL172W	YGL260W	P53056	76 aa		4.21	□□□□□ -1.74
EBP2	YKL172W	ZPR1	P53303	486 aa	Known RBP	4.21	□□□□□ -1.74
EBP2	YKL172W	SLD5	Q03406	294 aa		4.21	□□□□□ -1.74
EBP2	YKL172W	RQC1	Q05468	723 aa	Known RBP	4.21	□□□□□ -1.74
EBP2	YKL172W	VPS74	Q06385	345 aa		4.21	□□□□□ -1.74
EBP2	YKL172W	TIP41	Q12199	356 aa		4.21	□□□□□ -1.74
EBP2	YKL172W	YML133C	Q03099	1374 aa		4.21	□□□□□ -1.74
EBP2	YKL172W	YLL067C	Q07888	1374 aa		4.21	□□□□□ -1.74
EBP2	YKL172W	YLL066C	Q99208	1374 aa		4.21	□□□□□ -1.74
EBP2	YKL172W	AMD1	P15274	810 aa	Known RBP	4.2	□□□□□ -1.74
EBP2	YKL172W	ROX1	P25042	368 aa		4.2	□□□□□ -1.74
EBP2	YKL172W	NDC1	P32500	655 aa		4.2	□□□□□ -1.74
EBP2	YKL172W	MSN2	P33748	704 aa		4.2	□□□□□ -1.74
EBP2	YKL172W	FMP46	P36141	133 aa	Known RBP	4.2	□□□□□ -1.74
EBP2	YKL172W	MDM31	P38880	579 aa		4.2	□□□□□ -1.74
EBP2	YKL172W	VPS52	P39904	641 aa		4.2	□□□□□ -1.74
EBP2	YKL172W	HXT14	P42833	540 aa		4.2	□□□□□ -1.74
EBP2	YKL172W	TAF11	Q04226	346 aa		4.2	□□□□□ -1.74
EBP2	YKL172W	YMR087W	Q04299	284 aa		4.2	□□□□□ -1.74
EBP2	YKL172W	RBS1	Q05672	457 aa	Known RBP	4.2	□□□□□ -1.74
EBP2	YKL172W	MRPL51	Q06090	140 aa	Predicted RBP	4.2	□□□□□ -1.74
EBP2	YKL172W	SYO1	Q07395	620 aa		4.2	□□□□□ -1.74
EBP2	YKL172W	SCM3	Q12334	223 aa		4.2	□□□□□ -1.74
EBP2	YKL172W	GRX6	Q12438	231 aa		4.2	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 26.9 ms