RNA–Protein interactions for RNA: YGR213C

RTA1, Transcript of Protein involved in 7-aminocholesterol resistance, yeast

Gene RTA1, Length 954 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RTA1	YGR213C	RPC19	P28000	142 aa	Known RBP	4.09	□□□□□ -1.75
RTA1	YGR213C	SRB4	P32569	687 aa		4.09	□□□□□ -1.75
RTA1	YGR213C	CSE1	P33307	960 aa		4.09	□□□□□ -1.75
RTA1	YGR213C	SEC66	P33754	206 aa		4.09	□□□□□ -1.75
RTA1	YGR213C	YKL023W	P36103	277 aa	Known RBP	4.09	□□□□□ -1.75
RTA1	YGR213C	ECM4	P36156	370 aa		4.09	□□□□□ -1.75
RTA1	YGR213C	SCO2	P38072	301 aa		4.09	□□□□□ -1.75
RTA1	YGR213C	YBR242W	P38331	238 aa		4.09	□□□□□ -1.75
RTA1	YGR213C	GND1	P38720	489 aa	Known RBP	4.09	□□□□□ -1.75
RTA1	YGR213C	INA22	P40576	216 aa		4.09	□□□□□ -1.75
RTA1	YGR213C	IME4	P41833	600 aa		4.09	□□□□□ -1.75
RTA1	YGR213C	ALB1	P47019	175 aa	Predicted RBP	4.09	□□□□□ -1.75
RTA1	YGR213C	MUB1	Q03162	620 aa		4.09	□□□□□ -1.75
RTA1	YGR213C	PFA5	Q03289	374 aa		4.09	□□□□□ -1.75
RTA1	YGR213C	MGR3	Q04472	501 aa		4.09	□□□□□ -1.75
RTA1	YGR213C	MMR1	Q06324	491 aa		4.09	□□□□□ -1.75
RTA1	YGR213C	YDL144C	Q07589	356 aa		4.09	□□□□□ -1.75
RTA1	YGR213C	YOR289W	Q12012	251 aa	Predicted RBP	4.09	□□□□□ -1.75
RTA1	YGR213C	BUG1	Q12191	341 aa		4.09	□□□□□ -1.75
RTA1	YGR213C	PDR18	P53756	1333 aa		4.09	□□□□□ -1.75
RTA1	YGR213C	CDC16	P09798	840 aa		4.08	□□□□□ -1.76
RTA1	YGR213C	GLK1	P17709	500 aa	Known RBP	4.08	□□□□□ -1.76
RTA1	YGR213C	TKL1	P23254	680 aa	Known RBP	4.08	□□□□□ -1.76
RTA1	YGR213C	RER1	P25560	188 aa		4.08	□□□□□ -1.76
RTA1	YGR213C	ASF2	P32448	525 aa	Predicted RBP	4.08	□□□□□ -1.76
RTA1	YGR213C	NIP1	P32497	812 aa	Known RBP	4.08	□□□□□ -1.76
RTA1	YGR213C	POP7	P38291	140 aa		4.08	□□□□□ -1.76
RTA1	YGR213C	CTM1	P38818	585 aa		4.08	□□□□□ -1.76
RTA1	YGR213C	RCY1	P39531	840 aa		4.08	□□□□□ -1.76
RTA1	YGR213C	MHP1	P43638	1398 aa		4.08	□□□□□ -1.76
RTA1	YGR213C	LYS20	P48570	428 aa	Known RBP	4.08	□□□□□ -1.76
RTA1	YGR213C	BET4	Q00618	327 aa		4.08	□□□□□ -1.76
RTA1	YGR213C	ATG17	Q06410	417 aa		4.08	□□□□□ -1.76
RTA1	YGR213C	GSH2	Q08220	491 aa		4.08	□□□□□ -1.76
RTA1	YGR213C	PGC1	Q08959	321 aa		4.08	□□□□□ -1.76
RTA1	YGR213C	UBX3	Q12229	455 aa		4.08	□□□□□ -1.76
RTA1	YGR213C	IES3	Q12345	250 aa		4.08	□□□□□ -1.76
RTA1	YGR213C	ADF1	Q2V2Q1	113 aa		4.08	□□□□□ -1.76
RTA1	YGR213C	PDR10	P51533	1564 aa		4.07	□□□□□ -1.76
RTA1	YGR213C	SSK2	P53599	1579 aa		4.07	□□□□□ -1.76
RTA1	YGR213C	SCC2	Q04002	1493 aa		4.07	□□□□□ -1.76
RTA1	YGR213C	RPC40	P07703	335 aa	Known RBP	4.07	□□□□□ -1.76
RTA1	YGR213C	NMT1	P14743	455 aa		4.07	□□□□□ -1.76
RTA1	YGR213C	VMA2	P16140	517 aa	Known RBP	4.07	□□□□□ -1.76
RTA1	YGR213C	RDS1	P25611	832 aa		4.07	□□□□□ -1.76
RTA1	YGR213C	SAC1	P32368	623 aa	Known RBP	4.07	□□□□□ -1.76
RTA1	YGR213C	SSE1	P32589	693 aa	Known RBP	4.07	□□□□□ -1.76
RTA1	YGR213C	HCS1	P34243	683 aa		4.07	□□□□□ -1.76
RTA1	YGR213C	KEL1	P38853	1164 aa	Known RBP	4.07	□□□□□ -1.76
RTA1	YGR213C	SLZ1	P40167	298 aa		4.07	□□□□□ -1.76
RTA1	YGR213C	SEC24	P40482	926 aa	Known RBP	4.07	□□□□□ -1.76
RTA1	YGR213C	SEC28	P40509	296 aa	Known RBP	4.07	□□□□□ -1.76
RTA1	YGR213C	SYG1	P40528	902 aa		4.07	□□□□□ -1.76
RTA1	YGR213C	YIR016W	P40572	265 aa		4.07	□□□□□ -1.76
RTA1	YGR213C	YFR020W	P43600	232 aa		4.07	□□□□□ -1.76
RTA1	YGR213C	ROK1	P45818	564 aa	Predicted RBP	4.07	□□□□□ -1.76
RTA1	YGR213C	IRC8	P47046	822 aa		4.07	□□□□□ -1.76
RTA1	YGR213C	VPS25	P47142	202 aa		4.07	□□□□□ -1.76
RTA1	YGR213C	YGR067C	P53243	804 aa		4.07	□□□□□ -1.76
RTA1	YGR213C	YGR266W	P53326	701 aa		4.07	□□□□□ -1.76
RTA1	YGR213C	RET3	P53600	189 aa		4.07	□□□□□ -1.76
RTA1	YGR213C	INN1	P53901	409 aa		4.07	□□□□□ -1.76
RTA1	YGR213C	TAF11	Q04226	346 aa		4.07	□□□□□ -1.76
RTA1	YGR213C	IVY1	Q04934	453 aa		4.07	□□□□□ -1.76
RTA1	YGR213C	DYN3	Q04949	312 aa		4.07	□□□□□ -1.76
RTA1	YGR213C	POS5	Q06892	414 aa		4.07	□□□□□ -1.76
RTA1	YGR213C	YPL225W	Q08971	146 aa	Known RBP	4.07	□□□□□ -1.76
RTA1	YGR213C	NBP2	Q12163	236 aa		4.07	□□□□□ -1.76
RTA1	YGR213C	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
RTA1	YGR213C	YBR085C-A	O43137	85 aa		4.06	□□□□□ -1.76
RTA1	YGR213C	REP1	P03871	373 aa		4.06	□□□□□ -1.76
RTA1	YGR213C	CLB2	P24869	491 aa		4.06	□□□□□ -1.76
RTA1	YGR213C	SPB1	P25582	841 aa	Predicted RBP	4.06	□□□□□ -1.76
RTA1	YGR213C	SSH4	P32343	579 aa		4.06	□□□□□ -1.76
RTA1	YGR213C	KRE6	P32486	720 aa		4.06	□□□□□ -1.76
RTA1	YGR213C	ALY1	P36117	915 aa		4.06	□□□□□ -1.76
RTA1	YGR213C	LEU5	P38702	357 aa		4.06	□□□□□ -1.76
RTA1	YGR213C	RTC3	P38804	111 aa	Predicted RBP	4.06	□□□□□ -1.76
RTA1	YGR213C	SSO2	P39926	295 aa		4.06	□□□□□ -1.76
RTA1	YGR213C	ALD5	P40047	520 aa	Known RBP	4.06	□□□□□ -1.76
RTA1	YGR213C	PKP1	P40530	394 aa		4.06	□□□□□ -1.76
RTA1	YGR213C	SIP4	P46954	829 aa		4.06	□□□□□ -1.76
RTA1	YGR213C	SSN8	P47821	323 aa		4.06	□□□□□ -1.76
RTA1	YGR213C	LYS4	P49367	693 aa	Predicted RBP	4.06	□□□□□ -1.76
RTA1	YGR213C	CBK1	P53894	756 aa		4.06	□□□□□ -1.76
RTA1	YGR213C	ALF1	P53904	254 aa		4.06	□□□□□ -1.76
RTA1	YGR213C	INA17	Q02888	182 aa		4.06	□□□□□ -1.76
RTA1	YGR213C	RVB1	Q03940	463 aa	Known RBP	4.06	□□□□□ -1.76
RTA1	YGR213C	SPC2	Q04969	178 aa		4.06	□□□□□ -1.76
RTA1	YGR213C	ARP9	Q05123	467 aa		4.06	□□□□□ -1.76
RTA1	YGR213C	YLR287C	Q05881	355 aa		4.06	□□□□□ -1.76
RTA1	YGR213C	SEC10	Q06245	871 aa		4.06	□□□□□ -1.76
RTA1	YGR213C	MCP2	Q06567	569 aa		4.06	□□□□□ -1.76
RTA1	YGR213C	MLH2	Q07980	695 aa		4.06	□□□□□ -1.76
RTA1	YGR213C	YLR112W	Q12130	139 aa		4.06	□□□□□ -1.76
RTA1	YGR213C	HXK2	P04807	486 aa	Known RBP	4.05	□□□□□ -1.76
RTA1	YGR213C	HIS3	P06633	220 aa		4.05	□□□□□ -1.76
RTA1	YGR213C	FUM1	P08417	488 aa	Known RBP	4.05	□□□□□ -1.76
RTA1	YGR213C	RAP1	P11938	827 aa		4.05	□□□□□ -1.76
RTA1	YGR213C	TRX1	P22217	103 aa	Known RBP	4.05	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 17.3 ms