RNA–Protein interactions for RNA: YER111C

SWI4, Transcript of DNA binding component of the SBF complex (Swi4p-Swi6p), yeastyeast

Gene SWI4, Length 3,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI4YER111C PUP3P25451 205 aaKnown RBP1.32□□□□□ -2.2
SWI4YER111C BRF1P29056 596 aa1.32□□□□□ -2.2
SWI4YER111C SMI1P32566 505 aa1.32□□□□□ -2.2
SWI4YER111C ANP1P32629 500 aa1.32□□□□□ -2.2
SWI4YER111C YME2P32843 850 aa1.32□□□□□ -2.2
SWI4YER111C WBP1P33767 430 aaKnown RBP1.32□□□□□ -2.2
SWI4YER111C PXL1P36166 706 aa1.32□□□□□ -2.2
SWI4YER111C MMS4P38257 691 aa1.32□□□□□ -2.2
SWI4YER111C TSC10P38342 320 aa1.32□□□□□ -2.2
SWI4YER111C WSS1P38838 269 aa1.32□□□□□ -2.2
SWI4YER111C ERV46P39727 415 aa1.32□□□□□ -2.2
SWI4YER111C CAK1P43568 368 aaPredicted RBP1.32□□□□□ -2.2
SWI4YER111C SAE2P46946 345 aa1.32□□□□□ -2.2
SWI4YER111C SNG1P46950 547 aa1.32□□□□□ -2.2
SWI4YER111C UBP8P50102 471 aa1.32□□□□□ -2.2
SWI4YER111C YTP1P53584 459 aa1.32□□□□□ -2.2
SWI4YER111C KAP120Q02932 1032 aa1.32□□□□□ -2.2
SWI4YER111C YMR178WQ03219 274 aaKnown RBP1.32□□□□□ -2.2
SWI4YER111C RQC1Q05468 723 aaKnown RBP1.32□□□□□ -2.2
SWI4YER111C YDR286CQ05530 114 aa1.32□□□□□ -2.2
SWI4YER111C SPE3Q12074 293 aaKnown RBP1.32□□□□□ -2.2
SWI4YER111C ATG9Q12142 997 aa1.32□□□□□ -2.2
SWI4YER111C YBT1P32386 1661 aa1.32□□□□□ -2.2
SWI4YER111C CLC1P17891 233 aa1.32□□□□□ -2.2
SWI4YER111C URA4P20051 364 aa1.32□□□□□ -2.2
SWI4YER111C CPR2P23285 205 aa1.32□□□□□ -2.2
SWI4YER111C RAD14P28519 371 aa1.32□□□□□ -2.2
SWI4YER111C MCM4P30665 933 aaKnown RBP1.32□□□□□ -2.2
SWI4YER111C SAC1P32368 623 aaKnown RBP1.32□□□□□ -2.2
SWI4YER111C HXT3P32466 567 aaKnown RBP1.32□□□□□ -2.2
SWI4YER111C SNU114P36048 1008 aaKnown RBP1.32□□□□□ -2.2
SWI4YER111C LAS1P36146 502 aaPredicted RBP1.32□□□□□ -2.2
SWI4YER111C CBP4P37267 147 aa1.32□□□□□ -2.2
SWI4YER111C APD1P38281 316 aa1.32□□□□□ -2.2
SWI4YER111C TDA10P42938 290 aa1.32□□□□□ -2.2
SWI4YER111C STB2P46679 850 aa1.32□□□□□ -2.2
SWI4YER111C RMD9P53140 646 aaKnown RBP1.32□□□□□ -2.2
SWI4YER111C YGR016WP53209 190 aa1.32□□□□□ -2.2
SWI4YER111C EOS1P53938 366 aa1.32□□□□□ -2.2
SWI4YER111C VPS9P54787 451 aa1.32□□□□□ -2.2
SWI4YER111C TOF2Q02208 771 aa1.32□□□□□ -2.2
SWI4YER111C DON1Q05610 365 aa1.32□□□□□ -2.2
SWI4YER111C RRP45Q05636 305 aaKnown RBP1.32□□□□□ -2.2
SWI4YER111C MCP2Q06567 569 aa1.32□□□□□ -2.2
SWI4YER111C FRE3Q08905 711 aa1.32□□□□□ -2.2
SWI4YER111C YDR061WQ12298 539 aa1.32□□□□□ -2.2
SWI4YER111C YLR278CQ05854 1341 aa1.32□□□□□ -2.2
SWI4YER111C RAV1P47104 1357 aa1.32□□□□□ -2.2
SWI4YER111C TOP2P06786 1428 aaKnown RBP1.32□□□□□ -2.2
SWI4YER111C COR1P07256 457 aa1.32□□□□□ -2.2
SWI4YER111C APE1P14904 514 aa1.32□□□□□ -2.2
SWI4YER111C URA7P28274 579 aaKnown RBP1.32□□□□□ -2.2
SWI4YER111C RPN2P32565 945 aaKnown RBP1.32□□□□□ -2.2
SWI4YER111C ARA1P38115 344 aa1.32□□□□□ -2.2
SWI4YER111C RRT2P38332 387 aa1.32□□□□□ -2.2
SWI4YER111C CIN1P40987 1014 aa1.32□□□□□ -2.2
SWI4YER111C YJL107CP42947 387 aa1.32□□□□□ -2.2
SWI4YER111C NET1P47035 1189 aa1.32□□□□□ -2.2
SWI4YER111C VPS25P47142 202 aa1.32□□□□□ -2.2
SWI4YER111C TCB2P48231 1178 aa1.32□□□□□ -2.2
SWI4YER111C FMS1P50264 508 aa1.32□□□□□ -2.2
SWI4YER111C ZPR1P53303 486 aaKnown RBP1.32□□□□□ -2.2
SWI4YER111C RPA49Q01080 415 aaPredicted RBP1.32□□□□□ -2.2
SWI4YER111C CTF4Q01454 927 aa1.32□□□□□ -2.2
SWI4YER111C SHR3Q02774 210 aa1.32□□□□□ -2.2
SWI4YER111C RSF1Q05043 376 aa1.32□□□□□ -2.2
SWI4YER111C RBS1Q05672 457 aaKnown RBP1.32□□□□□ -2.2
SWI4YER111C COQ9Q05779 260 aa1.32□□□□□ -2.2
SWI4YER111C YLR455WQ06188 304 aa1.32□□□□□ -2.2
SWI4YER111C YDL218WQ07629 317 aa1.32□□□□□ -2.2
SWI4YER111C IRC10Q08118 586 aa1.32□□□□□ -2.2
SWI4YER111C THP1Q08231 455 aa1.32□□□□□ -2.2
SWI4YER111C PFA4Q12006 378 aa1.32□□□□□ -2.2
SWI4YER111C YDL007C-AQ2V2Q0 85 aa1.32□□□□□ -2.2
SWI4YER111C PRD1P25375 712 aa1.31□□□□□ -2.2
SWI4YER111C SPB1P25582 841 aaPredicted RBP1.31□□□□□ -2.2
SWI4YER111C YKL100CP34248 587 aa1.31□□□□□ -2.2
SWI4YER111C NUP133P36161 1157 aa1.31□□□□□ -2.2
SWI4YER111C CHS7P38843 316 aa1.31□□□□□ -2.2
SWI4YER111C FLO5P38894 1075 aa1.31□□□□□ -2.2
SWI4YER111C YMR124WP39523 943 aaKnown RBP1.31□□□□□ -2.2
SWI4YER111C TIF4631P39935 952 aaKnown RBP1.31□□□□□ -2.2
SWI4YER111C ATF1P40353 525 aa1.31□□□□□ -2.2
SWI4YER111C EPL1P43572 832 aa1.31□□□□□ -2.2
SWI4YER111C FYV8P46949 817 aaKnown RBP1.31□□□□□ -2.2
SWI4YER111C OCA1P50946 238 aaPredicted RBP1.31□□□□□ -2.2
SWI4YER111C PIB2P53191 635 aa1.31□□□□□ -2.2
SWI4YER111C RHO5P53879 331 aaKnown RBP1.31□□□□□ -2.2
SWI4YER111C PRP42Q03776 544 aaKnown RBP1.31□□□□□ -2.2
SWI4YER111C FIN1Q03898 291 aa1.31□□□□□ -2.2
SWI4YER111C PPM1Q04081 328 aa1.31□□□□□ -2.2
SWI4YER111C YMR130WQ04223 302 aa1.31□□□□□ -2.2
SWI4YER111C RDL1Q12305 139 aaKnown RBP1.31□□□□□ -2.2
SWI4YER111C HIP1P06775 603 aa1.31□□□□□ -2.2
SWI4YER111C GPA1P08539 472 aa1.31□□□□□ -2.2
SWI4YER111C SPS4P09937 338 aa1.31□□□□□ -2.2
SWI4YER111C YML002WP0CF17 737 aa1.31□□□□□ -2.2
SWI4YER111C ERG11P10614 530 aa1.31□□□□□ -2.2
SWI4YER111C YIM1P28625 365 aa1.31□□□□□ -2.2
SWI4YER111C RML2P32611 393 aa1.31□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 29.6 ms