RNA–Protein interactions for RNA: YDR425W

SNX41, Transcript of Sorting nexin, yeastyeast

Gene SNX41, Length 1,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNX41YDR425W RSM28Q03430 361 aa2.51□□□□□ -2.01
SNX41YDR425W ARP10Q04549 284 aa2.51□□□□□ -2.01
SNX41YDR425W UTP21Q06078 939 aaPredicted RBP2.51□□□□□ -2.01
SNX41YDR425W ARR1Q06596 294 aa2.51□□□□□ -2.01
SNX41YDR425W CBP1P07252 654 aa2.5□□□□□ -2.01
SNX41YDR425W NUC1P08466 329 aa2.5□□□□□ -2.01
SNX41YDR425W RPL5P26321 297 aaKnown RBP2.5□□□□□ -2.01
SNX41YDR425W PEP3P27801 918 aa2.5□□□□□ -2.01
SNX41YDR425W YPK3P38070 525 aa2.5□□□□□ -2.01
SNX41YDR425W LIN1P38852 340 aaPredicted RBP2.5□□□□□ -2.01
SNX41YDR425W CCT2P39076 527 aaKnown RBP2.5□□□□□ -2.01
SNX41YDR425W GVP36P40531 326 aaKnown RBP2.5□□□□□ -2.01
SNX41YDR425W AXL1P40851 1208 aa2.5□□□□□ -2.01
SNX41YDR425W HXT9P40885 567 aa2.5□□□□□ -2.01
SNX41YDR425W GCN20P43535 752 aaKnown RBP2.5□□□□□ -2.01
SNX41YDR425W IST1P53843 298 aaPredicted RBP2.5□□□□□ -2.01
SNX41YDR425W DIG1Q03063 452 aaKnown RBP2.5□□□□□ -2.01
SNX41YDR425W PFA5Q03289 374 aa2.5□□□□□ -2.01
SNX41YDR425W EBS1Q03466 884 aaKnown RBP2.5□□□□□ -2.01
SNX41YDR425W GIR2Q03768 265 aaPredicted RBP2.5□□□□□ -2.01
SNX41YDR425W VTI1Q04338 217 aa2.5□□□□□ -2.01
SNX41YDR425W YMR114CQ04471 368 aaKnown RBP2.5□□□□□ -2.01
SNX41YDR425W TAF9Q05027 157 aa2.5□□□□□ -2.01
SNX41YDR425W YLR287CQ05881 355 aa2.5□□□□□ -2.01
SNX41YDR425W MCP2Q06567 569 aa2.5□□□□□ -2.01
SNX41YDR425W TSR1Q07381 788 aaKnown RBP2.5□□□□□ -2.01
SNX41YDR425W SAC3P46674 1301 aa2.5□□□□□ -2.01
SNX41YDR425W SEC7P11075 2009 aaKnown RBP2.5□□□□□ -2.01
SNX41YDR425W RPL22AP05749 121 aaKnown RBP2.5□□□□□ -2.01
SNX41YDR425W TPK1P06244 397 aa2.5□□□□□ -2.01
SNX41YDR425W RAP1P11938 827 aa2.5□□□□□ -2.01
SNX41YDR425W TAL1P15019 335 aaKnown RBP2.5□□□□□ -2.01
SNX41YDR425W TYR1P20049 452 aa2.5□□□□□ -2.01
SNX41YDR425W CKI1P20485 582 aa2.5□□□□□ -2.01
SNX41YDR425W VPS1P21576 704 aaKnown RBP2.5□□□□□ -2.01
SNX41YDR425W DBF20P32328 564 aa2.5□□□□□ -2.01
SNX41YDR425W NPL6P32832 435 aa2.5□□□□□ -2.01
SNX41YDR425W RPS0AP32905 252 aaKnown RBP2.5□□□□□ -2.01
SNX41YDR425W RIB7P33312 244 aa2.5□□□□□ -2.01
SNX41YDR425W SRL3P36167 246 aa2.5□□□□□ -2.01
SNX41YDR425W RTS1P38903 757 aa2.5□□□□□ -2.01
SNX41YDR425W IST3P40565 148 aaPredicted RBP2.5□□□□□ -2.01
SNX41YDR425W FMS1P50264 508 aa2.5□□□□□ -2.01
SNX41YDR425W SHE10P53075 577 aa2.5□□□□□ -2.01
SNX41YDR425W RRT6P53117 311 aaPredicted RBP2.5□□□□□ -2.01
SNX41YDR425W ORM1P53224 222 aa2.5□□□□□ -2.01
SNX41YDR425W CTL1Q03220 320 aaKnown RBP2.5□□□□□ -2.01
SNX41YDR425W URH1Q04179 340 aa2.5□□□□□ -2.01
SNX41YDR425W SOV1Q04748 898 aa2.5□□□□□ -2.01
SNX41YDR425W YMR317WQ04893 1140 aa2.5□□□□□ -2.01
SNX41YDR425W FMP42Q04991 504 aa2.5□□□□□ -2.01
SNX41YDR425W RSF1Q05043 376 aa2.5□□□□□ -2.01
SNX41YDR425W NRT1Q08485 598 aa2.5□□□□□ -2.01
SNX41YDR425W TAF10Q12030 206 aa2.5□□□□□ -2.01
SNX41YDR425W RTP1Q12751 981 aa2.5□□□□□ -2.01
SNX41YDR425W NAT1P12945 854 aaKnown RBP2.49□□□□□ -2.01
SNX41YDR425W PFK2P16862 959 aaKnown RBP RIP-Chip data2.49□□□□□ -2.01not detected
SNX41YDR425W REC107P21651 314 aa2.49□□□□□ -2.01
SNX41YDR425W YCR051WP25631 222 aa2.49□□□□□ -2.01
SNX41YDR425W PPZ1P26570 692 aa2.49□□□□□ -2.01
SNX41YDR425W RPC19P28000 142 aaKnown RBP2.49□□□□□ -2.01
SNX41YDR425W GAC1P28006 793 aa2.49□□□□□ -2.01
SNX41YDR425W SEC1P30619 724 aaKnown RBP2.49□□□□□ -2.01
SNX41YDR425W GCG1P32656 232 aaKnown RBP2.49□□□□□ -2.01
SNX41YDR425W PTH2P34222 208 aa2.49□□□□□ -2.01
SNX41YDR425W SPP381P38282 291 aaPredicted RBP2.49□□□□□ -2.01
SNX41YDR425W TIF4631P39935 952 aaKnown RBP2.49□□□□□ -2.01
SNX41YDR425W IES5P40060 125 aa2.49□□□□□ -2.01
SNX41YDR425W SEC27P41811 889 aaKnown RBP2.49□□□□□ -2.01
SNX41YDR425W YNL320WP42840 284 aa2.49□□□□□ -2.01
SNX41YDR425W BNA1P47096 177 aa2.49□□□□□ -2.01
SNX41YDR425W BRO1P48582 844 aa2.49□□□□□ -2.01
SNX41YDR425W RBL2P48606 106 aaKnown RBP2.49□□□□□ -2.01
SNX41YDR425W CUE3P53137 624 aaKnown RBP2.49□□□□□ -2.01
SNX41YDR425W YTP1P53584 459 aa2.49□□□□□ -2.01
SNX41YDR425W YNL247WP53852 767 aaKnown RBP2.49□□□□□ -2.01
SNX41YDR425W TLG1Q03322 224 aa2.49□□□□□ -2.01
SNX41YDR425W ERG27Q12452 347 aaKnown RBP2.49□□□□□ -2.01
SNX41YDR425W SSK22P25390 1331 aaPredicted RBP2.49□□□□□ -2.01
SNX41YDR425W HNM1P19807 563 aa2.48□□□□□ -2.01
SNX41YDR425W PWP1P21304 576 aaKnown RBP2.48□□□□□ -2.01
SNX41YDR425W NIP1P32497 812 aaKnown RBP2.48□□□□□ -2.01
SNX41YDR425W CBF2P32504 956 aa2.48□□□□□ -2.01
SNX41YDR425W SSE1P32589 693 aaKnown RBP2.48□□□□□ -2.01
SNX41YDR425W CSE1P33307 960 aa2.48□□□□□ -2.01
SNX41YDR425W RPC25P35718 212 aa2.48□□□□□ -2.01
SNX41YDR425W VRG4P40107 337 aa2.48□□□□□ -2.01
SNX41YDR425W PKP1P40530 394 aa2.48□□□□□ -2.01
SNX41YDR425W SMK1P41808 388 aa2.48□□□□□ -2.01
SNX41YDR425W STB1P42845 420 aa2.48□□□□□ -2.01
SNX41YDR425W URB2P47108 1174 aa2.48□□□□□ -2.01
SNX41YDR425W HOS2P53096 452 aaPredicted RBP2.48□□□□□ -2.01
SNX41YDR425W CUL3P53202 744 aa2.48□□□□□ -2.01
SNX41YDR425W RPT6Q01939 405 aaKnown RBP2.48□□□□□ -2.01
SNX41YDR425W MRD1Q06106 887 aaKnown RBP2.48□□□□□ -2.01
SNX41YDR425W GGA1Q06336 557 aa2.48□□□□□ -2.01
SNX41YDR425W TSR2Q06672 205 aaKnown RBP2.48□□□□□ -2.01
SNX41YDR425W PSR2Q07949 397 aa2.48□□□□□ -2.01
SNX41YDR425W YOL075CQ08234 1294 aa2.48□□□□□ -2.01
SNX41YDR425W TAH18Q12181 623 aa2.48□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 18.9 ms