RNA–Protein interactions for RNA: YDR328C

SKP1, Transcript of Evolutionarily conserved kinetochore protein, yeast

Gene SKP1, Length 585 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKP1	YDR328C	TRM5	P38793	499 aa		7.07	□□□□□ -1.28
SKP1	YDR328C	TIF34	P40217	347 aa	Known RBP	7.07	□□□□□ -1.28
SKP1	YDR328C	COG2	P53271	262 aa		7.07	□□□□□ -1.28
SKP1	YDR328C	CAF120	P53836	1060 aa		7.07	□□□□□ -1.28
SKP1	YDR328C	PRO2	P54885	456 aa	Known RBP	7.07	□□□□□ -1.28
SKP1	YDR328C	RTT10	Q08924	1013 aa		7.07	□□□□□ -1.28
SKP1	YDR328C	IOC2	Q12072	812 aa		7.07	□□□□□ -1.28
SKP1	YDR328C	YPL245W	Q12179	454 aa	Known RBP	7.07	□□□□□ -1.28
SKP1	YDR328C	COX3	P00420	269 aa		7.06	□□□□□ -1.28
SKP1	YDR328C	ATP6	P00854	259 aa		7.06	□□□□□ -1.28
SKP1	YDR328C	PHO81	P17442	1178 aa		7.06	□□□□□ -1.28
SKP1	YDR328C	RDS2	P19541	446 aa	Known RBP	7.06	□□□□□ -1.28
SKP1	YDR328C	HXT4	P32467	576 aa		7.06	□□□□□ -1.28
SKP1	YDR328C	MGM101	P32787	269 aa	Known RBP	7.06	□□□□□ -1.28
SKP1	YDR328C	EMC3	P36039	253 aa		7.06	□□□□□ -1.28
SKP1	YDR328C	YBR071W	P38243	211 aa		7.06	□□□□□ -1.28
SKP1	YDR328C	DED81	P38707	554 aa	Known RBP	7.06	□□□□□ -1.28
SKP1	YDR328C	AXL2	P38928	823 aa		7.06	□□□□□ -1.28
SKP1	YDR328C	HXT6	P39003	570 aa	Known RBP	7.06	□□□□□ -1.28
SKP1	YDR328C	HXT7	P39004	570 aa		7.06	□□□□□ -1.28
SKP1	YDR328C	PCF11	P39081	626 aa	Predicted RBP	7.06	□□□□□ -1.28
SKP1	YDR328C	ARB1	P40024	610 aa	Known RBP	7.06	□□□□□ -1.28
SKP1	YDR328C	NDE1	P40215	560 aa		7.06	□□□□□ -1.28
SKP1	YDR328C	ALG5	P40350	334 aa		7.06	□□□□□ -1.28
SKP1	YDR328C	MTR3	P48240	250 aa	Predicted RBP	7.06	□□□□□ -1.28
SKP1	YDR328C	COS12	P53053	380 aa		7.06	□□□□□ -1.28
SKP1	YDR328C	ARC35	P53731	342 aa	Known RBP	7.06	□□□□□ -1.28
SKP1	YDR328C	YNL260C	P53846	198 aa		7.06	□□□□□ -1.28
SKP1	YDR328C	YNL035C	P53962	389 aa	Known RBP	7.06	□□□□□ -1.28
SKP1	YDR328C	ECM11	Q04110	302 aa		7.06	□□□□□ -1.28
SKP1	YDR328C	YML053C	Q04978	212 aa		7.06	□□□□□ -1.28
SKP1	YDR328C	ATG29	Q12092	213 aa		7.06	□□□□□ -1.28
SKP1	YDR328C	YPR011C	Q12251	326 aa		7.06	□□□□□ -1.28
SKP1	YDR328C	RGT2	Q12300	763 aa		7.06	□□□□□ -1.28
SKP1	YDR328C	SUL2	Q12325	893 aa		7.06	□□□□□ -1.28
SKP1	YDR328C	JLP1	Q12358	412 aa		7.06	□□□□□ -1.28
SKP1	YDR328C	YCL012C	Q8J0M4	134 aa		7.06	□□□□□ -1.28
SKP1	YDR328C	HRP1	Q99383	534 aa	Known RBP	7.06	□□□□□ -1.28
SKP1	YDR328C	ATP2	P00830	511 aa	Known RBP	7.05	□□□□□ -1.28
SKP1	YDR328C	PRT1	P06103	763 aa	Known RBP	7.05	□□□□□ -1.28
SKP1	YDR328C	SAN1	P22470	610 aa		7.05	□□□□□ -1.28
SKP1	YDR328C	SPS22	P25380	463 aa		7.05	□□□□□ -1.28
SKP1	YDR328C	UBP14	P38237	781 aa	Known RBP	7.05	□□□□□ -1.28
SKP1	YDR328C	GGC1	P38988	300 aa		7.05	□□□□□ -1.28
SKP1	YDR328C	HPM1	P40481	377 aa		7.05	□□□□□ -1.28
SKP1	YDR328C	YIL108W	P40483	696 aa	Known RBP	7.05	□□□□□ -1.28
SKP1	YDR328C	SSU1	P41930	458 aa		7.05	□□□□□ -1.28
SKP1	YDR328C	TY4A-J	P47023	414 aa		7.05	□□□□□ -1.28
SKP1	YDR328C	MPS3	P47069	682 aa		7.05	□□□□□ -1.28
SKP1	YDR328C	GTO1	P48239	356 aa		7.05	□□□□□ -1.28
SKP1	YDR328C	MNN10	P50108	393 aa	Known RBP	7.05	□□□□□ -1.28
SKP1	YDR328C	GIP3	Q03016	1276 aa		7.05	□□□□□ -1.28
SKP1	YDR328C	YDR476C	Q03362	224 aa		7.05	□□□□□ -1.28
SKP1	YDR328C	CTK1	Q03957	528 aa	Known RBP	7.05	□□□□□ -1.28
SKP1	YDR328C	EAF1	Q06337	982 aa		7.05	□□□□□ -1.28
SKP1	YDR328C	SGT1	Q08446	395 aa		7.05	□□□□□ -1.28
SKP1	YDR328C	GPN2	Q08726	347 aa	Predicted RBP	7.05	□□□□□ -1.28
SKP1	YDR328C	PFA4	Q12006	378 aa		7.05	□□□□□ -1.28
SKP1	YDR328C	YDR056C	Q12025	205 aa		7.05	□□□□□ -1.28
SKP1	YDR328C	SLF1	Q12034	447 aa	Known RBP	7.05	□□□□□ -1.28
SKP1	YDR328C	HUA2	Q12134	243 aa		7.05	□□□□□ -1.28
SKP1	YDR328C	NSL1	Q12143	216 aa		7.05	□□□□□ -1.28
SKP1	YDR328C	YKL018C-A	Q3E7A7	99 aa		7.05	□□□□□ -1.28
SKP1	YDR328C	SRN2	Q99176	213 aa		7.05	□□□□□ -1.28
SKP1	YDR328C	DST1	P07273	309 aa		7.04	□□□□□ -1.28
SKP1	YDR328C	PDC5	P16467	563 aa	Known RBP	7.04	□□□□□ -1.28
SKP1	YDR328C	SGV1	P23293	657 aa	Known RBP	7.04	□□□□□ -1.28
SKP1	YDR328C	MEF1	P25039	761 aa		7.04	□□□□□ -1.28
SKP1	YDR328C	CSM1	P25651	190 aa		7.04	□□□□□ -1.28
SKP1	YDR328C	ZIP1	P31111	875 aa		7.04	□□□□□ -1.28
SKP1	YDR328C	AYR1	P40471	297 aa		7.04	□□□□□ -1.28
SKP1	YDR328C	MEP2	P41948	499 aa		7.04	□□□□□ -1.28
SKP1	YDR328C	MET12	P46151	657 aa		7.04	□□□□□ -1.28
SKP1	YDR328C	DIA3	P52290	468 aa		7.04	□□□□□ -1.28
SKP1	YDR328C	SWS2	P53937	143 aa		7.04	□□□□□ -1.28
SKP1	YDR328C	ACL4	Q03771	387 aa		7.04	□□□□□ -1.28
SKP1	YDR328C	TRM82	Q03774	444 aa		7.04	□□□□□ -1.28
SKP1	YDR328C	DYN3	Q04949	312 aa		7.04	□□□□□ -1.28
SKP1	YDR328C	GGA1	Q06336	557 aa		7.04	□□□□□ -1.28
SKP1	YDR328C	PSR1	Q07800	427 aa		7.04	□□□□□ -1.28
SKP1	YDR328C	TFB4	Q12004	338 aa		7.04	□□□□□ -1.28
SKP1	YDR328C	BRR1	Q99177	341 aa	Predicted RBP	7.04	□□□□□ -1.28
SKP1	YDR328C	MDM35	O60200	86 aa		7.03	□□□□□ -1.28
SKP1	YDR328C	MRP13	P12686	339 aa		7.03	□□□□□ -1.28
SKP1	YDR328C	CCA1	P21269	546 aa		7.03	□□□□□ -1.28
SKP1	YDR328C	PPH21	P23594	369 aa		7.03	□□□□□ -1.28
SKP1	YDR328C	GBP2	P25555	427 aa	Known RBP RIP-Chip data	7.03	□□□□□ -1.28	not detected
SKP1	YDR328C	YCR087C-A	P37263	153 aa		7.03	□□□□□ -1.28
SKP1	YDR328C	TRM7	P38238	310 aa	Known RBP	7.03	□□□□□ -1.28
SKP1	YDR328C	IST2	P38250	946 aa		7.03	□□□□□ -1.28
SKP1	YDR328C	YAL037W	P39728	267 aa		7.03	□□□□□ -1.28
SKP1	YDR328C	JEM1	P40358	645 aa		7.03	□□□□□ -1.28
SKP1	YDR328C	MAM33	P40513	266 aa		7.03	□□□□□ -1.28
SKP1	YDR328C	IMA5	P40884	581 aa		7.03	□□□□□ -1.28
SKP1	YDR328C	NUP85	P46673	744 aa		7.03	□□□□□ -1.28
SKP1	YDR328C	AIM22	P47051	409 aa		7.03	□□□□□ -1.28
SKP1	YDR328C	SGF73	P53165	657 aa		7.03	□□□□□ -1.28
SKP1	YDR328C	IDP3	P53982	420 aa	Known RBP	7.03	□□□□□ -1.28
SKP1	YDR328C	IRC15	Q02733	499 aa		7.03	□□□□□ -1.28
SKP1	YDR328C	HSP31	Q04432	237 aa		7.03	□□□□□ -1.28

Retrieved 100 of 5,963 RNA–protein pairs in 138.5 ms