RNA–Protein interactions for RNA: snR50

snR50, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR50, Length 90 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR50snR50 ROT2P38138 954 aa0.04□□□□□ -2.4
snR50snR50 ATG12P38316 186 aa0.04□□□□□ -2.4
snR50snR50 GPP1P41277 250 aaKnown RBP0.04□□□□□ -2.4
snR50snR50 SWP82P43554 623 aa0.04□□□□□ -2.4
snR50snR50 YFR020WP43600 232 aa0.04□□□□□ -2.4
snR50snR50 SCD6P45978 349 aaKnown RBP RIP-Chip data0.04□□□□□ -2.4not detected
snR50snR50 GWT1P47026 490 aa0.04□□□□□ -2.4
snR50snR50 CPR7P47103 393 aa0.04□□□□□ -2.4
snR50snR50 SLD3P53135 668 aa0.04□□□□□ -2.4
snR50snR50 NNF2P53253 936 aa0.04□□□□□ -2.4
snR50snR50 YPL107WQ02873 248 aa0.04□□□□□ -2.4
snR50snR50 SLD5Q03406 294 aa0.04□□□□□ -2.4
snR50snR50 PIN3Q06449 215 aa0.04□□□□□ -2.4
snR50snR50 THI73Q07904 523 aa0.04□□□□□ -2.4
snR50snR50 PLB3Q08108 686 aa0.04□□□□□ -2.4
snR50snR50 DNL4Q08387 944 aaPredicted RBP0.04□□□□□ -2.4
snR50snR50 CTI6Q08923 506 aa0.04□□□□□ -2.4
snR50snR50 PLP2Q12017 286 aa0.04□□□□□ -2.4
snR50snR50 SLF1Q12034 447 aaKnown RBP0.04□□□□□ -2.4
snR50snR50 NOP14Q99207 810 aaKnown RBP0.04□□□□□ -2.4
snR50snR50 ADH1P00330 348 aaKnown RBP0.03□□□□□ -2.4
snR50snR50 RPS8AP0CX39 200 aaKnown RBP0.03□□□□□ -2.4
snR50snR50 RPS8BP0CX40 200 aaKnown RBP0.03□□□□□ -2.4
snR50snR50 ART10P18634 518 aaKnown RBP0.03□□□□□ -2.4
snR50snR50 COX11P19516 300 aaKnown RBP0.03□□□□□ -2.4
snR50snR50 SPS22P25380 463 aa0.03□□□□□ -2.4
snR50snR50 HEM12P32347 362 aaPredicted RBP0.03□□□□□ -2.4
snR50snR50 SMY1P32364 656 aaKnown RBP0.03□□□□□ -2.4
snR50snR50 GCD7P32502 381 aaPredicted RBP0.03□□□□□ -2.4
snR50snR50 UTR5P32630 166 aa0.03□□□□□ -2.4
snR50snR50 FRE1P32791 686 aa0.03□□□□□ -2.4
snR50snR50 NPL6P32832 435 aa0.03□□□□□ -2.4
snR50snR50 MNS1P32906 549 aa0.03□□□□□ -2.4
snR50snR50 YKL091CP33324 310 aaKnown RBP0.03□□□□□ -2.4
snR50snR50 SNU114P36048 1008 aaKnown RBP0.03□□□□□ -2.4
snR50snR50 PRY2P36110 329 aa0.03□□□□□ -2.4
snR50snR50 UIP3P39547 235 aa0.03□□□□□ -2.4
snR50snR50 SCS2P40075 244 aaKnown RBP0.03□□□□□ -2.4
snR50snR50 SCC4P40090 624 aa0.03□□□□□ -2.4
snR50snR50 YIL161WP40449 235 aaKnown RBP0.03□□□□□ -2.4
snR50snR50 CAB2P40506 365 aa0.03□□□□□ -2.4
snR50snR50 ELP2P42935 788 aa0.03□□□□□ -2.4
snR50snR50 WWM1P43582 211 aaKnown RBP0.03□□□□□ -2.4
snR50snR50 YJL144WP47009 104 aa0.03□□□□□ -2.4
snR50snR50 NIT2P47016 307 aa0.03□□□□□ -2.4
snR50snR50 IMA1P53051 589 aa0.03□□□□□ -2.4
snR50snR50 YGR018CP53211 109 aa0.03□□□□□ -2.4
snR50snR50 YNR029CP53729 429 aaKnown RBP0.03□□□□□ -2.4
snR50snR50 UME1Q03010 460 aa0.03□□□□□ -2.4
snR50snR50 PIR3Q03180 325 aa0.03□□□□□ -2.4
snR50snR50 PEX15Q08215 383 aa0.03□□□□□ -2.4
snR50snR50 SSP2Q08646 371 aa0.03□□□□□ -2.4
snR50snR50 ATG9Q12142 997 aa0.03□□□□□ -2.4
snR50snR50 BEM2P39960 2167 aaKnown RBP0.03□□□□□ -2.4
snR50snR50 YPR096CO13587 100 aa0.02□□□□□ -2.41
snR50snR50 HXK2P04807 486 aaKnown RBP0.02□□□□□ -2.41
snR50snR50 ARG81P05085 880 aa0.02□□□□□ -2.41
snR50snR50 NFT1P0CE68 1218 aa0.02□□□□□ -2.41
snR50snR50 ADH4P10127 382 aa0.02□□□□□ -2.41
snR50snR50 PEP5P12868 1029 aa0.02□□□□□ -2.41
snR50snR50 SPE2P21182 396 aa0.02□□□□□ -2.41
snR50snR50 SIR1P21691 654 aa0.02□□□□□ -2.41
snR50snR50 PHO3P24031 467 aa0.02□□□□□ -2.41
snR50snR50 TFC3P34111 1160 aa0.02□□□□□ -2.41
snR50snR50 MRPL10P36520 322 aa0.02□□□□□ -2.41
snR50snR50 SWD1P39706 426 aa0.02□□□□□ -2.41
snR50snR50 AIM10P39965 576 aaKnown RBP0.02□□□□□ -2.41
snR50snR50 FAU1P40099 211 aa0.02□□□□□ -2.41
snR50snR50 GAT2P40209 560 aa0.02□□□□□ -2.41
snR50snR50 IMA5P40884 581 aa0.02□□□□□ -2.41
snR50snR50 YFL012WP43580 148 aa0.02□□□□□ -2.41
snR50snR50 RRT5P43607 289 aa0.02□□□□□ -2.41
snR50snR50 SGM1P47166 707 aa0.02□□□□□ -2.41
snR50snR50 YJR154WP47181 346 aa0.02□□□□□ -2.41
snR50snR50 STR3P53101 465 aaKnown RBP0.02□□□□□ -2.41
snR50snR50 GPG1P53130 126 aa0.02□□□□□ -2.41
snR50snR50 SPC105P53148 917 aa0.02□□□□□ -2.41
snR50snR50 MTM1P53320 366 aa0.02□□□□□ -2.41
snR50snR50 SMM1P53720 384 aaKnown RBP0.02□□□□□ -2.41
snR50snR50 CWC25P53854 179 aaKnown RBP0.02□□□□□ -2.41
snR50snR50 SLX4Q12098 748 aa0.02□□□□□ -2.41
snR50snR50 COX4P04037 155 aa0.01□□□□□ -2.41
snR50snR50 MRP13P12686 339 aa0.01□□□□□ -2.41
snR50snR50 NCP1P16603 691 aaKnown RBP0.01□□□□□ -2.41
snR50snR50 LCB1P25045 558 aaKnown RBP0.01□□□□□ -2.41
snR50snR50 YPS1P32329 569 aa0.01□□□□□ -2.41
snR50snR50 DAL3P32459 195 aa0.01□□□□□ -2.41
snR50snR50 SRB5P32585 307 aa0.01□□□□□ -2.41
snR50snR50 UTR4P32626 227 aa0.01□□□□□ -2.41
snR50snR50 AGA2P32781 87 aa0.01□□□□□ -2.41
snR50snR50 REC114P32841 428 aa0.01□□□□□ -2.41
snR50snR50 MTR2P34232 184 aaKnown RBP0.01□□□□□ -2.41
snR50snR50 SPT10P35208 640 aa0.01□□□□□ -2.41
snR50snR50 TSC10P38342 320 aa0.01□□□□□ -2.41
snR50snR50 UME6P39001 836 aa0.01□□□□□ -2.41
snR50snR50 ALD5P40047 520 aaKnown RBP0.01□□□□□ -2.41
snR50snR50 YER186CP40101 306 aa0.01□□□□□ -2.41
snR50snR50 SEC9P40357 651 aa0.01□□□□□ -2.41
snR50snR50 GCD10P41814 478 aa0.01□□□□□ -2.41
snR50snR50 OSW7P43611 510 aa0.01□□□□□ -2.41
Retrieved 100 of 5,963 RNA–protein pairs in 113.7 ms