RNA–Protein interactions for RNA: YPR173C

VPS4, Transcript of AAA-ATPase involved in multivesicular body (MVB) protein sorting, yeastyeast

Gene VPS4, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS4YPR173C EAF6P47128 113 aa5.92□□□□□ -1.46
VPS4YPR173C CLD1P53264 445 aa5.92□□□□□ -1.46
VPS4YPR173C YML108WQ03759 105 aa5.92□□□□□ -1.46
VPS4YPR173C RRP17Q04031 235 aaPredicted RBP5.92□□□□□ -1.46
VPS4YPR173C NHX1Q04121 633 aa5.92□□□□□ -1.46
VPS4YPR173C ARP9Q05123 467 aa5.92□□□□□ -1.46
VPS4YPR173C BRE4Q07660 1125 aa5.92□□□□□ -1.46
VPS4YPR173C MED2Q12124 431 aa5.92□□□□□ -1.46
VPS4YPR173C REC8Q12188 680 aa5.92□□□□□ -1.46
VPS4YPR173C CSR2Q12734 1121 aa5.92□□□□□ -1.46
VPS4YPR173C YOL159C-AQ3E769 90 aa5.92□□□□□ -1.46
VPS4YPR173C TY4B-PA0A0B7P3V8 1104 aa5.91□□□□□ -1.46
VPS4YPR173C RPL6BP05739 176 aaKnown RBP5.91□□□□□ -1.46
VPS4YPR173C CDC31P06704 161 aaKnown RBP5.91□□□□□ -1.46
VPS4YPR173C MRP13P12686 339 aa5.91□□□□□ -1.46
VPS4YPR173C TOP3P13099 656 aa5.91□□□□□ -1.46
VPS4YPR173C CBS2P14905 389 aa5.91□□□□□ -1.46
VPS4YPR173C SAC7P17121 654 aa5.91□□□□□ -1.46
VPS4YPR173C PHO81P17442 1178 aa5.91□□□□□ -1.46
VPS4YPR173C ART10P18634 518 aaKnown RBP5.91□□□□□ -1.46
VPS4YPR173C PRP21P32524 280 aaPredicted RBP5.91□□□□□ -1.46
VPS4YPR173C GDH2P33327 1092 aaKnown RBP5.91□□□□□ -1.46
VPS4YPR173C HSP78P33416 811 aa5.91□□□□□ -1.46
VPS4YPR173C YKL077WP36081 392 aa5.91□□□□□ -1.46
VPS4YPR173C SPC34P36131 295 aa5.91□□□□□ -1.46
VPS4YPR173C ROT2P38138 954 aa5.91□□□□□ -1.46
VPS4YPR173C YHR218WP38899 603 aa5.91□□□□□ -1.46
VPS4YPR173C FAD1P38913 306 aa5.91□□□□□ -1.46
VPS4YPR173C MNN1P39106 762 aa5.91□□□□□ -1.46
VPS4YPR173C CNN1P43618 361 aa5.91□□□□□ -1.46
VPS4YPR173C PFD1P46988 109 aa5.91□□□□□ -1.46
VPS4YPR173C IMD3P50095 523 aaKnown RBP5.91□□□□□ -1.46
VPS4YPR173C PSP2P50109 593 aaKnown RBP5.91□□□□□ -1.46
VPS4YPR173C SLD3P53135 668 aa5.91□□□□□ -1.46
VPS4YPR173C GTR2P53290 341 aa5.91□□□□□ -1.46
VPS4YPR173C ESF2P53743 316 aaKnown RBP5.91□□□□□ -1.46
VPS4YPR173C RLI1Q03195 608 aaKnown RBP5.91□□□□□ -1.46
VPS4YPR173C PEX12Q04370 399 aa5.91□□□□□ -1.46
VPS4YPR173C ARP10Q04549 284 aa5.91□□□□□ -1.46
VPS4YPR173C HEL2Q05580 639 aaKnown RBP5.91□□□□□ -1.46
VPS4YPR173C REH1Q06709 432 aa5.91□□□□□ -1.46
VPS4YPR173C DTD1Q07648 150 aaKnown RBP5.91□□□□□ -1.46
VPS4YPR173C YOL159CQ08300 171 aa5.91□□□□□ -1.46
VPS4YPR173C PUS7Q08647 676 aaKnown RBP5.91□□□□□ -1.46
VPS4YPR173C APC5Q08683 685 aa5.91□□□□□ -1.46
VPS4YPR173C FLC1Q08967 793 aa5.91□□□□□ -1.46
VPS4YPR173C TY3A-GQ12173 290 aa5.91□□□□□ -1.46
VPS4YPR173C TY3A-IQ99219 290 aa5.91□□□□□ -1.46
VPS4YPR173C TRP3P00937 484 aa5.9□□□□□ -1.47
VPS4YPR173C CLN2P20438 545 aa5.9□□□□□ -1.47
VPS4YPR173C TRX2P22803 104 aaKnown RBP5.9□□□□□ -1.47
VPS4YPR173C PUP3P25451 205 aaKnown RBP5.9□□□□□ -1.47
VPS4YPR173C CMK1P27466 446 aaKnown RBP5.9□□□□□ -1.47
VPS4YPR173C UBC8P28263 218 aa5.9□□□□□ -1.47
VPS4YPR173C PRP19P32523 503 aaKnown RBP5.9□□□□□ -1.47
VPS4YPR173C AIM26P32858 118 aa5.9□□□□□ -1.47
VPS4YPR173C RGT1P32862 1170 aa5.9□□□□□ -1.47
VPS4YPR173C PSF2P40359 213 aa5.9□□□□□ -1.47
VPS4YPR173C SER33P40510 469 aa5.9□□□□□ -1.47
VPS4YPR173C MAF1P41910 395 aa5.9□□□□□ -1.47
VPS4YPR173C GCV1P48015 400 aa5.9□□□□□ -1.47
VPS4YPR173C YGR053CP53234 283 aa5.9□□□□□ -1.47
VPS4YPR173C TPO2P53283 614 aa5.9□□□□□ -1.47
VPS4YPR173C YNR014WP53719 212 aa5.9□□□□□ -1.47
VPS4YPR173C MET14Q02196 202 aa5.9□□□□□ -1.47
VPS4YPR173C RSC9Q03124 581 aa5.9□□□□□ -1.47
VPS4YPR173C UGO1Q03327 502 aa5.9□□□□□ -1.47
VPS4YPR173C SKY1Q03656 742 aa5.9□□□□□ -1.47
VPS4YPR173C FIN1Q03898 291 aa5.9□□□□□ -1.47
VPS4YPR173C TRM12Q04235 462 aa5.9□□□□□ -1.47
VPS4YPR173C PEX10Q05568 337 aa5.9□□□□□ -1.47
VPS4YPR173C ECM38Q05902 660 aaPredicted RBP5.9□□□□□ -1.47
VPS4YPR173C MDY2Q12285 212 aa5.9□□□□□ -1.47
VPS4YPR173C BBP1Q12365 385 aa5.9□□□□□ -1.47
VPS4YPR173C DCP1Q12517 231 aaPredicted RBP5.9□□□□□ -1.47
VPS4YPR173C HTZ1Q12692 134 aaKnown RBP5.9□□□□□ -1.47
VPS4YPR173C SUC2P00724 532 aa5.89□□□□□ -1.47
VPS4YPR173C HEM2P05373 342 aa5.89□□□□□ -1.47
VPS4YPR173C GPH1P06738 902 aaKnown RBP5.89□□□□□ -1.47
VPS4YPR173C NFT1P0CE68 1218 aa5.89□□□□□ -1.47
VPS4YPR173C YSP3P25036 478 aa5.89□□□□□ -1.47
VPS4YPR173C LRE1P25579 583 aaKnown RBP5.89□□□□□ -1.47
VPS4YPR173C BUB2P26448 306 aaPredicted RBP5.89□□□□□ -1.47
VPS4YPR173C FUN30P31380 1131 aa5.89□□□□□ -1.47
VPS4YPR173C ACH1P32316 526 aa5.89□□□□□ -1.47
VPS4YPR173C YKL100CP34248 587 aa5.89□□□□□ -1.47
VPS4YPR173C AGP2P38090 596 aa5.89□□□□□ -1.47
VPS4YPR173C ECM8P38246 354 aa5.89□□□□□ -1.47
VPS4YPR173C FTH1P38310 465 aa5.89□□□□□ -1.47
VPS4YPR173C YLF2P38746 405 aa5.89□□□□□ -1.47
VPS4YPR173C PRM9P39551 298 aa5.89□□□□□ -1.47
VPS4YPR173C GIP4P39732 760 aa5.89□□□□□ -1.47
VPS4YPR173C JLP2P40206 208 aa5.89□□□□□ -1.47
VPS4YPR173C COA1P40452 197 aa5.89□□□□□ -1.47
VPS4YPR173C VMA13P41807 478 aaKnown RBP5.89□□□□□ -1.47
VPS4YPR173C GUS1P46655 708 aaKnown RBP RIP-Chip data5.89□□□□□ -1.47not detected
VPS4YPR173C MTR3P48240 250 aaPredicted RBP5.89□□□□□ -1.47
VPS4YPR173C ATP22P50273 684 aaPredicted RBP5.89□□□□□ -1.47
VPS4YPR173C ARE2P53629 642 aaKnown RBP5.89□□□□□ -1.47
VPS4YPR173C CWC24P53769 259 aa5.89□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 28.9 ms