RNA–Protein interactions for RNA: YOR171C

LCB4, Transcript of Sphingoid long-chain base kinase, yeastyeast

Gene LCB4, Length 1,875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB4YOR171C YRF1-4O13559 1382 aa3.23□□□□□ -1.89
LCB4YOR171C GPA1P08539 472 aa3.22□□□□□ -1.89
LCB4YOR171C RPL1AP0CX43 217 aaKnown RBP3.22□□□□□ -1.89
LCB4YOR171C RPL1BP0CX44 217 aaKnown RBP3.22□□□□□ -1.89
LCB4YOR171C PCK1P10963 549 aa3.22□□□□□ -1.89
LCB4YOR171C RAP1P11938 827 aa3.22□□□□□ -1.89
LCB4YOR171C YPK2P18961 677 aa3.22□□□□□ -1.89
LCB4YOR171C PRP2P20095 876 aaPredicted RBP3.22□□□□□ -1.89
LCB4YOR171C RDS1P25611 832 aa3.22□□□□□ -1.89
LCB4YOR171C YCR016WP25617 290 aaKnown RBP3.22□□□□□ -1.89
LCB4YOR171C CAP1P28495 268 aaKnown RBP3.22□□□□□ -1.89
LCB4YOR171C GLG1P36143 616 aa3.22□□□□□ -1.89
LCB4YOR171C STB5P38699 743 aa3.22□□□□□ -1.89
LCB4YOR171C BZZ1P38822 633 aa3.22□□□□□ -1.89
LCB4YOR171C YJL193WP39542 402 aa3.22□□□□□ -1.89
LCB4YOR171C PRM9P39551 298 aa3.22□□□□□ -1.89
LCB4YOR171C ASG1P40467 964 aa3.22□□□□□ -1.89
LCB4YOR171C ULP2P40537 1034 aaPredicted RBP3.22□□□□□ -1.89
LCB4YOR171C CHS6P40955 746 aa3.22□□□□□ -1.89
LCB4YOR171C GSM1P42950 618 aa3.22□□□□□ -1.89
LCB4YOR171C DIP5P53388 608 aa3.22□□□□□ -1.89
LCB4YOR171C YNL146WP53906 100 aa3.22□□□□□ -1.89
LCB4YOR171C REG1Q00816 1014 aa3.22□□□□□ -1.89
LCB4YOR171C YSA1Q01976 231 aa3.22□□□□□ -1.89
LCB4YOR171C RLI1Q03195 608 aaKnown RBP3.22□□□□□ -1.89
LCB4YOR171C TMN2Q04562 672 aa3.22□□□□□ -1.89
LCB4YOR171C RTT103Q05543 409 aa3.22□□□□□ -1.89
LCB4YOR171C YLR297WQ05899 129 aa3.22□□□□□ -1.89
LCB4YOR171C TGS1Q12052 315 aa3.22□□□□□ -1.89
LCB4YOR171C NMD4Q12129 218 aa3.22□□□□□ -1.89
LCB4YOR171C UBX3Q12229 455 aa3.22□□□□□ -1.89
LCB4YOR171C PNS1Q12412 539 aa3.22□□□□□ -1.89
LCB4YOR171C CTF3Q12748 733 aa3.22□□□□□ -1.89
LCB4YOR171C YBR126W-AQ8TGU7 68 aa3.22□□□□□ -1.89
LCB4YOR171C STE2D6VTK4 431 aa3.22□□□□□ -1.89
LCB4YOR171C TAL1P15019 335 aaKnown RBP3.22□□□□□ -1.89
LCB4YOR171C PAP1P29468 568 aaKnown RBP3.22□□□□□ -1.89
LCB4YOR171C HXT1P32465 570 aa3.22□□□□□ -1.89
LCB4YOR171C KKQ8P36004 724 aa3.22□□□□□ -1.89
LCB4YOR171C YPT52P36018 234 aaKnown RBP3.22□□□□□ -1.89
LCB4YOR171C MRPL36P36531 177 aa3.22□□□□□ -1.89
LCB4YOR171C ADE17P38009 592 aaKnown RBP3.22□□□□□ -1.89
LCB4YOR171C YHR182WP38870 785 aa3.22□□□□□ -1.89
LCB4YOR171C STT3P39007 718 aaKnown RBP3.22□□□□□ -1.89
LCB4YOR171C YJL206CP39529 758 aa3.22□□□□□ -1.89
LCB4YOR171C BDH2P39713 417 aa3.22□□□□□ -1.89
LCB4YOR171C YEL057CP39983 233 aa3.22□□□□□ -1.89
LCB4YOR171C CTR1P49573 406 aa3.22□□□□□ -1.89
LCB4YOR171C RMR1P53060 241 aa3.22□□□□□ -1.89
LCB4YOR171C GND2P53319 492 aa3.22□□□□□ -1.89
LCB4YOR171C TIM44Q01852 431 aa3.22□□□□□ -1.89
LCB4YOR171C NGL3Q03210 505 aa3.22□□□□□ -1.89
LCB4YOR171C ATC1Q04005 294 aa3.22□□□□□ -1.89
LCB4YOR171C GIM5Q04493 163 aa3.22□□□□□ -1.89
LCB4YOR171C ROY1Q04847 553 aa3.22□□□□□ -1.89
LCB4YOR171C YLR173WQ06247 608 aa3.22□□□□□ -1.89
LCB4YOR171C ABP140Q08641 628 aaKnown RBP3.22□□□□□ -1.89
LCB4YOR171C ULA1Q12059 462 aa3.22□□□□□ -1.89
LCB4YOR171C YOR111WQ99210 232 aa3.22□□□□□ -1.89
LCB4YOR171C AFI1Q99222 893 aa3.22□□□□□ -1.89
LCB4YOR171C CBP2P03874 630 aaPredicted RBP3.21□□□□□ -1.9
LCB4YOR171C RPL6BP05739 176 aaKnown RBP3.21□□□□□ -1.9
LCB4YOR171C CDC24P11433 854 aaPredicted RBP3.21□□□□□ -1.9
LCB4YOR171C CBS1P14066 229 aa3.21□□□□□ -1.9
LCB4YOR171C YCK1P23291 538 aa3.21□□□□□ -1.9
LCB4YOR171C PRP45P28004 379 aaPredicted RBP3.21□□□□□ -1.9
LCB4YOR171C BMH1P29311 267 aaKnown RBP3.21□□□□□ -1.9
LCB4YOR171C TPS2P31688 896 aaKnown RBP3.21□□□□□ -1.9
LCB4YOR171C GDH2P33327 1092 aaKnown RBP3.21□□□□□ -1.9
LCB4YOR171C OCT1P35999 772 aa3.21□□□□□ -1.9
LCB4YOR171C GMH1P36125 273 aa3.21□□□□□ -1.9
LCB4YOR171C APL3P38065 1025 aa3.21□□□□□ -1.9
LCB4YOR171C SRO77P38163 1010 aa3.21□□□□□ -1.9
LCB4YOR171C APD1P38281 316 aa3.21□□□□□ -1.9
LCB4YOR171C RTC3P38804 111 aaPredicted RBP3.21□□□□□ -1.9
LCB4YOR171C MNN9P39107 395 aaKnown RBP3.21□□□□□ -1.9
LCB4YOR171C FLC2P39719 783 aa3.21□□□□□ -1.9
LCB4YOR171C TIM21P53220 239 aa3.21□□□□□ -1.9
LCB4YOR171C YGR117CP53270 476 aa3.21□□□□□ -1.9
LCB4YOR171C AQR1P53943 586 aa3.21□□□□□ -1.9
LCB4YOR171C RPL6AQ02326 176 aaKnown RBP3.21□□□□□ -1.9
LCB4YOR171C CSI1Q04368 295 aa3.21□□□□□ -1.9
LCB4YOR171C GTO3Q04806 366 aa3.21□□□□□ -1.9
LCB4YOR171C SPC2Q04969 178 aa3.21□□□□□ -1.9
LCB4YOR171C HOF1Q05080 669 aa3.21□□□□□ -1.9
LCB4YOR171C PDR8Q06149 701 aa3.21□□□□□ -1.9
LCB4YOR171C CUR1Q06469 252 aa3.21□□□□□ -1.9
LCB4YOR171C GRS2Q06817 618 aa3.21□□□□□ -1.9
LCB4YOR171C RCN2Q12044 265 aa3.21□□□□□ -1.9
LCB4YOR171C SGS1P35187 1447 aa3.21□□□□□ -1.9
LCB4YOR171C RPS3P05750 240 aaKnown RBP3.2□□□□□ -1.9
LCB4YOR171C GCD2P12754 651 aaPredicted RBP3.2□□□□□ -1.9
LCB4YOR171C STE4P18851 423 aa3.2□□□□□ -1.9
LCB4YOR171C GID7P25569 745 aa3.2□□□□□ -1.9
LCB4YOR171C PSO2P30620 661 aa3.2□□□□□ -1.9
LCB4YOR171C DSS4P32601 143 aa3.2□□□□□ -1.9
LCB4YOR171C MIT1P40002 666 aa3.2□□□□□ -1.9
LCB4YOR171C YER085CP40058 173 aa3.2□□□□□ -1.9
LCB4YOR171C SCC4P40090 624 aa3.2□□□□□ -1.9
LCB4YOR171C SHQ1P40486 507 aaPredicted RBP3.2□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms