RNA–Protein interactions for RNA: YOR098C

NUP1, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeast

Gene NUP1, Length 3,231 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP1	YOR098C	TIF3	P34167	436 aa	Known RBP	5.42	□□□□□ -1.54
NUP1	YOR098C	HCS1	P34243	683 aa		5.42	□□□□□ -1.54
NUP1	YOR098C	TOS1	P38288	455 aa		5.42	□□□□□ -1.54
NUP1	YOR098C	RSM25	P40496	264 aa		5.42	□□□□□ -1.54
NUP1	YOR098C	INA22	P40576	216 aa		5.42	□□□□□ -1.54
NUP1	YOR098C	BOP3	P53958	396 aa		5.42	□□□□□ -1.54
NUP1	YOR098C	ACL4	Q03771	387 aa		5.42	□□□□□ -1.54
NUP1	YOR098C	YDR444W	Q04093	687 aa		5.42	□□□□□ -1.54
NUP1	YOR098C	TY1A-NL1	Q12391	440 aa	Known RBP	5.42	□□□□□ -1.54
NUP1	YOR098C	YLR415C	O13578	112 aa		5.42	□□□□□ -1.54
NUP1	YOR098C	STE3	P06783	470 aa		5.42	□□□□□ -1.54
NUP1	YOR098C	CAR2	P07991	424 aa	Known RBP	5.42	□□□□□ -1.54
NUP1	YOR098C	SPE1	P08432	466 aa		5.42	□□□□□ -1.54
NUP1	YOR098C	GCD2	P12754	651 aa	Predicted RBP	5.42	□□□□□ -1.54
NUP1	YOR098C	CDC42	P19073	191 aa		5.42	□□□□□ -1.54
NUP1	YOR098C	PPH22	P23595	377 aa		5.42	□□□□□ -1.54
NUP1	YOR098C	LRE1	P25579	583 aa	Known RBP	5.42	□□□□□ -1.54
NUP1	YOR098C	IDH2	P28241	369 aa	Known RBP	5.42	□□□□□ -1.54
NUP1	YOR098C	ETP1	P38748	585 aa	Known RBP	5.42	□□□□□ -1.54
NUP1	YOR098C	MNN9	P39107	395 aa	Known RBP	5.42	□□□□□ -1.54
NUP1	YOR098C	INA17	Q02888	182 aa		5.42	□□□□□ -1.54
NUP1	YOR098C	YMR102C	Q03177	834 aa		5.42	□□□□□ -1.54
NUP1	YOR098C	ARR3	Q06598	404 aa		5.42	□□□□□ -1.54
NUP1	YOR098C	ULA1	Q12059	462 aa		5.42	□□□□□ -1.54
NUP1	YOR098C	TY1A-BL	Q12266	440 aa		5.42	□□□□□ -1.54
NUP1	YOR098C	NBL1	Q3E7Y6	73 aa		5.42	□□□□□ -1.54
NUP1	YOR098C	TUB3	P09734	445 aa	Known RBP	5.41	□□□□□ -1.54
NUP1	YOR098C	PDA1	P16387	420 aa	Known RBP	5.41	□□□□□ -1.54
NUP1	YOR098C	PRP6	P19735	899 aa	Predicted RBP	5.41	□□□□□ -1.54
NUP1	YOR098C	YCR061W	P25639	631 aa		5.41	□□□□□ -1.54
NUP1	YOR098C	MSN4	P33749	630 aa		5.41	□□□□□ -1.54
NUP1	YOR098C	TUL1	P36096	758 aa		5.41	□□□□□ -1.54
NUP1	YOR098C	APT2	P36973	181 aa		5.41	□□□□□ -1.54
NUP1	YOR098C	AGP2	P38090	596 aa		5.41	□□□□□ -1.54
NUP1	YOR098C	YMR124W	P39523	943 aa	Known RBP	5.41	□□□□□ -1.54
NUP1	YOR098C	YJL132W	P47014	750 aa		5.41	□□□□□ -1.54
NUP1	YOR098C	YGL082W	P53155	381 aa		5.41	□□□□□ -1.54
NUP1	YOR098C	LDB17	Q12342	491 aa		5.41	□□□□□ -1.54
NUP1	YOR098C	RAS1	P01119	309 aa		5.41	□□□□□ -1.54
NUP1	YOR098C	SUP35	P05453	685 aa	Known RBP	5.41	□□□□□ -1.54
NUP1	YOR098C	PRB1	P09232	635 aa		5.41	□□□□□ -1.54
NUP1	YOR098C	RBD2	Q12270	262 aa		5.41	□□□□□ -1.54
NUP1	YOR098C	BMT6	Q12291	365 aa		5.41	□□□□□ -1.54
NUP1	YOR098C	PDB1	P32473	366 aa	Known RBP	5.4	□□□□□ -1.54
NUP1	YOR098C	STE14	P32584	239 aa		5.4	□□□□□ -1.54
NUP1	YOR098C	COT1	P32798	439 aa		5.4	□□□□□ -1.54
NUP1	YOR098C	YJL193W	P39542	402 aa		5.4	□□□□□ -1.54
NUP1	YOR098C	SSO2	P39926	295 aa		5.4	□□□□□ -1.54
NUP1	YOR098C	IAH1	P41734	238 aa		5.4	□□□□□ -1.54
NUP1	YOR098C	RPS7B	P48164	190 aa	Known RBP	5.4	□□□□□ -1.54
NUP1	YOR098C	YGR149W	P48236	432 aa		5.4	□□□□□ -1.54
NUP1	YOR098C	ARI1	P53111	347 aa	Known RBP	5.4	□□□□□ -1.54
NUP1	YOR098C	UTP6	Q02354	440 aa	Known RBP	5.4	□□□□□ -1.54
NUP1	YOR098C	USA1	Q03714	838 aa		5.4	□□□□□ -1.54
NUP1	YOR098C	FRE3	Q08905	711 aa		5.4	□□□□□ -1.54
NUP1	YOR098C	FMP40	Q08968	688 aa	Predicted RBP	5.4	□□□□□ -1.54
NUP1	YOR098C	SFG1	Q12507	346 aa		5.4	□□□□□ -1.54
NUP1	YOR098C	CBP1	P07252	654 aa		5.4	□□□□□ -1.54
NUP1	YOR098C	AIM26	P32858	118 aa		5.4	□□□□□ -1.54
NUP1	YOR098C	GLG1	P36143	616 aa		5.4	□□□□□ -1.54
NUP1	YOR098C	FAD1	P38913	306 aa		5.4	□□□□□ -1.54
NUP1	YOR098C	IRC8	P47046	822 aa		5.4	□□□□□ -1.54
NUP1	YOR098C	RMD9	P53140	646 aa	Known RBP	5.4	□□□□□ -1.54
NUP1	YOR098C	IMO32	P53219	342 aa		5.4	□□□□□ -1.54
NUP1	YOR098C	YDR179W-A	Q03983	463 aa		5.4	□□□□□ -1.54
NUP1	YOR098C	SML1	Q04964	104 aa		5.4	□□□□□ -1.54
NUP1	YOR098C	RRP5	Q05022	1729 aa	Known RBP	5.4	□□□□□ -1.55
NUP1	YOR098C	DSS4	P32601	143 aa		5.4	□□□□□ -1.55
NUP1	YOR098C	MRPL37	P36532	105 aa		5.4	□□□□□ -1.55
NUP1	YOR098C	YBR259W	P38338	688 aa		5.4	□□□□□ -1.55
NUP1	YOR098C	YJL206C	P39529	758 aa		5.4	□□□□□ -1.55
NUP1	YOR098C	YNL144C	P53907	740 aa		5.4	□□□□□ -1.55
NUP1	YOR098C	YLR297W	Q05899	129 aa		5.4	□□□□□ -1.55
NUP1	YOR098C	RGC1	Q06108	1083 aa	Known RBP	5.4	□□□□□ -1.55
NUP1	YOR098C	SIL1	Q08199	421 aa		5.4	□□□□□ -1.55
NUP1	YOR098C	YCR015C	P25616	317 aa		5.39	□□□□□ -1.55
NUP1	YOR098C	RFA2	P26754	273 aa	Known RBP	5.39	□□□□□ -1.55
NUP1	YOR098C	ASF2	P32448	525 aa	Predicted RBP	5.39	□□□□□ -1.55
NUP1	YOR098C	YJL070C	P40361	888 aa		5.39	□□□□□ -1.55
NUP1	YOR098C	PNC1	P53184	216 aa	Known RBP	5.39	□□□□□ -1.55
NUP1	YOR098C	YGR054W	P53235	642 aa	Known RBP	5.39	□□□□□ -1.55
NUP1	YOR098C	RPT4	P53549	437 aa	Known RBP	5.39	□□□□□ -1.55
NUP1	YOR098C	IPI3	P53877	555 aa		5.39	□□□□□ -1.55
NUP1	YOR098C	GIM3	P53900	129 aa		5.39	□□□□□ -1.55
NUP1	YOR098C	RNT1	Q02555	471 aa		5.39	□□□□□ -1.55
NUP1	YOR098C	TY1A-MR1	Q04215	440 aa		5.39	□□□□□ -1.55
NUP1	YOR098C	UFO1	Q04511	668 aa		5.39	□□□□□ -1.55
NUP1	YOR098C	NUP188	P52593	1655 aa	Known RBP	5.39	□□□□□ -1.55
NUP1	YOR098C	ARG80	P07249	177 aa		5.39	□□□□□ -1.55
NUP1	YOR098C	MRP13	P12686	339 aa		5.39	□□□□□ -1.55
NUP1	YOR098C	KIN2	P13186	1147 aa	Known RBP	5.39	□□□□□ -1.55
NUP1	YOR098C	KRE6	P32486	720 aa		5.39	□□□□□ -1.55
NUP1	YOR098C	YNG2	P38806	282 aa	Known RBP	5.39	□□□□□ -1.55
NUP1	YOR098C	TMN3	P40071	706 aa		5.39	□□□□□ -1.55
NUP1	YOR098C	YGL138C	P53122	345 aa		5.39	□□□□□ -1.55
NUP1	YOR098C	DUR1,2	P32528	1835 aa	Known RBP	5.39	□□□□□ -1.55
NUP1	YOR098C	RNR2	P09938	399 aa	Known RBP	5.38	□□□□□ -1.55
NUP1	YOR098C	SPO7	P18410	259 aa		5.38	□□□□□ -1.55
NUP1	YOR098C	URA4	P20051	364 aa		5.38	□□□□□ -1.55
NUP1	YOR098C	MBR1	P23493	339 aa		5.38	□□□□□ -1.55

Retrieved 100 of 5,963 RNA–protein pairs in 77.8 ms