RNA–Protein interactions for RNA: YOR005C

DNL4, Transcript of DNA ligase required for nonhomologous end-joining (NHEJ), yeastyeast

Gene DNL4, Length 2,835 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DNL4YOR005C YLR224WQ05947 369 aa2.62□□□□□ -1.99
DNL4YOR005C VTA1Q06263 330 aa2.62□□□□□ -1.99
DNL4YOR005C ENB1Q08299 606 aa2.62□□□□□ -1.99
DNL4YOR005C YOR352WQ08816 343 aa2.62□□□□□ -1.99
DNL4YOR005C YPL225WQ08971 146 aaKnown RBP2.62□□□□□ -1.99
DNL4YOR005C APL4Q12028 832 aa2.62□□□□□ -1.99
DNL4YOR005C RRP36Q12481 300 aaPredicted RBP2.62□□□□□ -1.99
DNL4YOR005C CTF3Q12748 733 aa2.62□□□□□ -1.99
DNL4YOR005C YER175W-AQ8TGU4 54 aa2.62□□□□□ -1.99
DNL4YOR005C EST1P17214 699 aaPredicted RBP2.61□□□□□ -1.99
DNL4YOR005C TFB1P32776 642 aa2.61□□□□□ -1.99
DNL4YOR005C MNN2P38069 597 aa2.61□□□□□ -1.99
DNL4YOR005C YSW1P38280 609 aa2.61□□□□□ -1.99
DNL4YOR005C RRT2P38332 387 aa2.61□□□□□ -1.99
DNL4YOR005C YHR097CP38809 366 aaKnown RBP2.61□□□□□ -1.99
DNL4YOR005C MAF1P41910 395 aa2.61□□□□□ -1.99
DNL4YOR005C INP52P50942 1183 aa2.61□□□□□ -1.99
DNL4YOR005C PAN2P53010 1115 aaPredicted RBP2.61□□□□□ -1.99
DNL4YOR005C YGR111WP53265 400 aa2.61□□□□□ -1.99
DNL4YOR005C YMR187CQ03236 431 aa2.61□□□□□ -1.99
DNL4YOR005C FIN1Q03898 291 aa2.61□□□□□ -1.99
DNL4YOR005C HCR1Q05775 265 aaKnown RBP2.61□□□□□ -1.99
DNL4YOR005C UAF30Q08747 228 aa2.61□□□□□ -1.99
DNL4YOR005C FMP40Q08968 688 aaPredicted RBP2.61□□□□□ -1.99
DNL4YOR005C FKS3Q04952 1785 aa2.61□□□□□ -1.99
DNL4YOR005C SUP35P05453 685 aaKnown RBP2.61□□□□□ -1.99
DNL4YOR005C TRP4P07285 380 aaPredicted RBP2.61□□□□□ -1.99
DNL4YOR005C CAD1P24813 409 aaKnown RBP2.61□□□□□ -1.99
DNL4YOR005C RML2P32611 393 aa2.61□□□□□ -1.99
DNL4YOR005C HES1P35843 434 aa2.61□□□□□ -1.99
DNL4YOR005C NTR2P36118 322 aaPredicted RBP2.61□□□□□ -1.99
DNL4YOR005C NUP133P36161 1157 aa2.61□□□□□ -1.99
DNL4YOR005C CCL1P37366 393 aa2.61□□□□□ -1.99
DNL4YOR005C PCH2P38126 564 aa2.61□□□□□ -1.99
DNL4YOR005C THI2P38141 450 aa2.61□□□□□ -1.99
DNL4YOR005C YPT10P38146 199 aa2.61□□□□□ -1.99
DNL4YOR005C YNL092WP53934 400 aa2.61□□□□□ -1.99
DNL4YOR005C MAK10Q02197 733 aa2.61□□□□□ -1.99
DNL4YOR005C MGR3Q04472 501 aa2.61□□□□□ -1.99
DNL4YOR005C GFD1Q04839 188 aaKnown RBP2.61□□□□□ -1.99
DNL4YOR005C DON1Q05610 365 aa2.61□□□□□ -1.99
DNL4YOR005C VAC14Q06708 880 aa2.61□□□□□ -1.99
DNL4YOR005C NOP6Q07623 225 aaKnown RBP2.61□□□□□ -1.99
DNL4YOR005C MLH2Q07980 695 aa2.61□□□□□ -1.99
DNL4YOR005C MLH3Q12083 715 aa2.61□□□□□ -1.99
DNL4YOR005C RLM1Q12224 676 aa2.61□□□□□ -1.99
DNL4YOR005C TY4B-HP0C2J7 1802 aa2.61□□□□□ -1.99
DNL4YOR005C TY4B-JP47024 1803 aa2.61□□□□□ -1.99
DNL4YOR005C MF(ALPHA)1P01149 165 aa2.6□□□□□ -1.99
DNL4YOR005C YML002WP0CF17 737 aa2.6□□□□□ -1.99
DNL4YOR005C PDA1P16387 420 aaKnown RBP2.6□□□□□ -1.99
DNL4YOR005C DAP2P18962 818 aa2.6□□□□□ -1.99
DNL4YOR005C VMA16P23968 213 aa2.6□□□□□ -1.99
DNL4YOR005C CDC10P25342 322 aaKnown RBP2.6□□□□□ -1.99
DNL4YOR005C HXT3P32466 567 aaKnown RBP2.6□□□□□ -1.99
DNL4YOR005C SSE2P32590 693 aaKnown RBP2.6□□□□□ -1.99
DNL4YOR005C SEF1P34228 1148 aa2.6□□□□□ -1.99
DNL4YOR005C PHO11P35842 467 aa2.6□□□□□ -1.99
DNL4YOR005C ELF1P36053 145 aa2.6□□□□□ -1.99
DNL4YOR005C ADE17P38009 592 aaKnown RBP2.6□□□□□ -1.99
DNL4YOR005C PHO12P38693 467 aa2.6□□□□□ -1.99
DNL4YOR005C TIF4631P39935 952 aaKnown RBP2.6□□□□□ -1.99
DNL4YOR005C MRX1P40050 688 aa2.6□□□□□ -1.99
DNL4YOR005C RPN11P43588 306 aaKnown RBP2.6□□□□□ -1.99
DNL4YOR005C IRC8P47046 822 aa2.6□□□□□ -1.99
DNL4YOR005C IMD4P50094 524 aaKnown RBP2.6□□□□□ -1.99
DNL4YOR005C YNR068CP53754 272 aa2.6□□□□□ -1.99
DNL4YOR005C ERV25P54837 211 aaKnown RBP2.6□□□□□ -1.99
DNL4YOR005C DLT1Q04216 342 aa2.6□□□□□ -1.99
DNL4YOR005C YLR456WQ06199 204 aa2.6□□□□□ -1.99
DNL4YOR005C DBP9Q06218 594 aaKnown RBP2.6□□□□□ -1.99
DNL4YOR005C MCA1Q08601 432 aa2.6□□□□□ -1.99
DNL4YOR005C YKL033W-AQ86ZR7 236 aa2.6□□□□□ -1.99
DNL4YOR005C COX1P00401 534 aa2.6□□□□□ -1.99
DNL4YOR005C TRP3P00937 484 aa2.6□□□□□ -1.99
DNL4YOR005C TPK2P06245 380 aa2.6□□□□□ -1.99
DNL4YOR005C RPC40P07703 335 aaKnown RBP2.6□□□□□ -1.99
DNL4YOR005C MRPS28P21771 286 aa2.6□□□□□ -1.99
DNL4YOR005C AMD2P22580 549 aa2.6□□□□□ -1.99
DNL4YOR005C SEC14P24280 304 aaKnown RBP2.6□□□□□ -1.99
DNL4YOR005C PHO84P25297 587 aaKnown RBP2.6□□□□□ -1.99
DNL4YOR005C ADH7P25377 361 aa2.6□□□□□ -1.99
DNL4YOR005C FUB1P25659 250 aa2.6□□□□□ -1.99
DNL4YOR005C CNE1P27825 502 aa2.6□□□□□ -1.99
DNL4YOR005C SRB4P32569 687 aa2.6□□□□□ -1.99
DNL4YOR005C YME2P32843 850 aa2.6□□□□□ -1.99
DNL4YOR005C DIA4P38705 446 aaPredicted RBP2.6□□□□□ -1.99
DNL4YOR005C MUP3P38734 546 aa2.6□□□□□ -1.99
DNL4YOR005C SKN7P38889 622 aa2.6□□□□□ -1.99
DNL4YOR005C SEC31P38968 1273 aaKnown RBP2.6□□□□□ -1.99
DNL4YOR005C RTT105P40063 208 aa2.6□□□□□ -1.99
DNL4YOR005C ELO3P40319 345 aa2.6□□□□□ -1.99
DNL4YOR005C CCT7P42943 550 aaKnown RBP2.6□□□□□ -1.99
DNL4YOR005C ILM1P47155 203 aa2.6□□□□□ -1.99
DNL4YOR005C CUE3P53137 624 aaKnown RBP2.6□□□□□ -1.99
DNL4YOR005C EFM6P53970 246 aa2.6□□□□□ -1.99
DNL4YOR005C ADA2Q02336 434 aa2.6□□□□□ -1.99
DNL4YOR005C YSH1Q06224 779 aaPredicted RBP2.6□□□□□ -1.99
DNL4YOR005C SWA2Q06677 668 aa2.6□□□□□ -1.99
DNL4YOR005C YDL242WQ07746 117 aa2.6□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 21.1 ms