RNA–Protein interactions for RNA: YNL186W

UBP10, Transcript of Ubiquitin-specific protease, deubiquitinates Ub-protein moieties, yeast

Gene UBP10, Length 2,379 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP10	YNL186W	YAT1	P80235	687 aa		4.18	□□□□□ -1.74
UBP10	YNL186W	RRN5	Q02983	363 aa		4.18	□□□□□ -1.74
UBP10	YNL186W	FIN1	Q03898	291 aa		4.18	□□□□□ -1.74
UBP10	YNL186W	MSC3	Q05812	728 aa		4.18	□□□□□ -1.74
UBP10	YNL186W	ACK1	Q07622	623 aa	Predicted RBP	4.18	□□□□□ -1.74
UBP10	YNL186W	CFT2	Q12102	859 aa	Predicted RBP	4.18	□□□□□ -1.74
UBP10	YNL186W	GCD1	P09032	578 aa	Predicted RBP	4.17	□□□□□ -1.74
UBP10	YNL186W	MRP13	P12686	339 aa		4.17	□□□□□ -1.74
UBP10	YNL186W	SRP54	P20424	541 aa	Known RBP	4.17	□□□□□ -1.74
UBP10	YNL186W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.17	□□□□□ -1.74	not detected
UBP10	YNL186W	MRI1	Q06489	411 aa	Known RBP	4.17	□□□□□ -1.74
UBP10	YNL186W	PDE1	P22434	369 aa		4.17	□□□□□ -1.74
UBP10	YNL186W	GRR1	P24814	1151 aa		4.17	□□□□□ -1.74
UBP10	YNL186W	SSE2	P32590	693 aa	Known RBP	4.17	□□□□□ -1.74
UBP10	YNL186W	YME1	P32795	747 aa		4.17	□□□□□ -1.74
UBP10	YNL186W	NIP100	P33420	868 aa		4.17	□□□□□ -1.74
UBP10	YNL186W	AFG3	P39925	761 aa		4.17	□□□□□ -1.74
UBP10	YNL186W	IRC8	P47046	822 aa		4.17	□□□□□ -1.74
UBP10	YNL186W	NUP84	P52891	726 aa		4.17	□□□□□ -1.74
UBP10	YNL186W	YNL143C	P53908	130 aa		4.17	□□□□□ -1.74
UBP10	YNL186W	ACL4	Q03771	387 aa		4.17	□□□□□ -1.74
UBP10	YNL186W	PPM1	Q04081	328 aa		4.17	□□□□□ -1.74
UBP10	YNL186W	RTT109	Q07794	436 aa		4.17	□□□□□ -1.74
UBP10	YNL186W	VPS54	Q12071	889 aa		4.17	□□□□□ -1.74
UBP10	YNL186W	RPL6B	P05739	176 aa	Known RBP	4.16	□□□□□ -1.74
UBP10	YNL186W	TAL1	P15019	335 aa	Known RBP	4.16	□□□□□ -1.74
UBP10	YNL186W	RRP43	P25359	394 aa	Predicted RBP	4.16	□□□□□ -1.74
UBP10	YNL186W	HCS1	P34243	683 aa		4.16	□□□□□ -1.74
UBP10	YNL186W	TUL1	P36096	758 aa		4.16	□□□□□ -1.74
UBP10	YNL186W	PIM1	P36775	1133 aa		4.16	□□□□□ -1.74
UBP10	YNL186W	SAF1	P38352	637 aa		4.16	□□□□□ -1.74
UBP10	YNL186W	WSS1	P38838	269 aa		4.16	□□□□□ -1.74
UBP10	YNL186W	BFR1	P38934	470 aa	Known RBP RIP-Chip data	4.16	□□□□□ -1.74	not detected
UBP10	YNL186W	ALG5	P40350	334 aa		4.16	□□□□□ -1.74
UBP10	YNL186W	ELP2	P42935	788 aa		4.16	□□□□□ -1.74
UBP10	YNL186W	STB2	P46679	850 aa		4.16	□□□□□ -1.74
UBP10	YNL186W	MPS3	P47069	682 aa		4.16	□□□□□ -1.74
UBP10	YNL186W	MSE1	P48525	536 aa		4.16	□□□□□ -1.74
UBP10	YNL186W	DAK1	P54838	584 aa	Known RBP	4.16	□□□□□ -1.74
UBP10	YNL186W	RPS15	Q01855	142 aa	Known RBP	4.16	□□□□□ -1.74
UBP10	YNL186W	RPL6A	Q02326	176 aa	Known RBP	4.16	□□□□□ -1.74
UBP10	YNL186W	ROT1	Q03691	256 aa		4.16	□□□□□ -1.74
UBP10	YNL186W	PCT1	P13259	424 aa		4.16	□□□□□ -1.74
UBP10	YNL186W	VMA16	P23968	213 aa		4.16	□□□□□ -1.74
UBP10	YNL186W	EMC1	P25574	760 aa		4.16	□□□□□ -1.74
UBP10	YNL186W	ICL1	P28240	557 aa	Predicted RBP	4.16	□□□□□ -1.74
UBP10	YNL186W	FAA1	P30624	700 aa	Known RBP	4.16	□□□□□ -1.74
UBP10	YNL186W	NTH1	P32356	751 aa		4.16	□□□□□ -1.74
UBP10	YNL186W	CDC5	P32562	705 aa		4.16	□□□□□ -1.74
UBP10	YNL186W	UGP1	P32861	499 aa	Known RBP	4.16	□□□□□ -1.74
UBP10	YNL186W	NTR2	P36118	322 aa	Predicted RBP	4.16	□□□□□ -1.74
UBP10	YNL186W	ICP55	P40051	511 aa		4.16	□□□□□ -1.74
UBP10	YNL186W	PRY1	P47032	299 aa		4.16	□□□□□ -1.74
UBP10	YNL186W	NPA3	P47122	385 aa		4.16	□□□□□ -1.74
UBP10	YNL186W	MSY1	P48527	492 aa		4.16	□□□□□ -1.74
UBP10	YNL186W	VPS62	P53285	467 aa		4.16	□□□□□ -1.74
UBP10	YNL186W	IPI3	P53877	555 aa		4.16	□□□□□ -1.74
UBP10	YNL186W	ARP5	P53946	755 aa		4.16	□□□□□ -1.74
UBP10	YNL186W	EFM6	P53970	246 aa		4.16	□□□□□ -1.74
UBP10	YNL186W	ECM18	Q04623	453 aa		4.16	□□□□□ -1.74
UBP10	YNL186W	KAP95	Q06142	861 aa	Known RBP	4.16	□□□□□ -1.74
UBP10	YNL186W	TAF3	Q12297	353 aa		4.16	□□□□□ -1.74
UBP10	YNL186W	TFB5	Q3E7C1	72 aa	Predicted RBP	4.16	□□□□□ -1.74
UBP10	YNL186W	YER175W-A	Q8TGU4	54 aa		4.16	□□□□□ -1.74
UBP10	YNL186W	MF(ALPHA)1	P01149	165 aa		4.15	□□□□□ -1.75
UBP10	YNL186W	PPH22	P23595	377 aa		4.15	□□□□□ -1.75
UBP10	YNL186W	CDC15	P27636	974 aa		4.15	□□□□□ -1.75
UBP10	YNL186W	PIG2	P40187	538 aa		4.15	□□□□□ -1.75
UBP10	YNL186W	FKH2	P41813	862 aa		4.15	□□□□□ -1.75
UBP10	YNL186W	LAM5	P43560	674 aa		4.15	□□□□□ -1.75
UBP10	YNL186W	YGR149W	P48236	432 aa		4.15	□□□□□ -1.75
UBP10	YNL186W	AQR1	P53943	586 aa		4.15	□□□□□ -1.75
UBP10	YNL186W	ORC3	P54790	616 aa		4.15	□□□□□ -1.75
UBP10	YNL186W	UBP16	Q02863	499 aa		4.15	□□□□□ -1.75
UBP10	YNL186W	YPL034W	Q03083	165 aa		4.15	□□□□□ -1.75
UBP10	YNL186W	VPS20	Q04272	221 aa		4.15	□□□□□ -1.75
UBP10	YNL186W	DUS4	Q06063	367 aa		4.15	□□□□□ -1.75
UBP10	YNL186W	RRT8	Q08219	342 aa		4.15	□□□□□ -1.75
UBP10	YNL186W	FRE3	Q08905	711 aa		4.15	□□□□□ -1.75
UBP10	YNL186W	SFG1	Q12507	346 aa		4.15	□□□□□ -1.75
UBP10	YNL186W	AMD2	P22580	549 aa		4.14	□□□□□ -1.75
UBP10	YNL186W	KAR4	P25583	335 aa		4.14	□□□□□ -1.75
UBP10	YNL186W	CDC20	P26309	610 aa		4.14	□□□□□ -1.75
UBP10	YNL186W	KSP1	P38691	1029 aa	Known RBP	4.14	□□□□□ -1.75
UBP10	YNL186W	BUR6	P40096	142 aa		4.14	□□□□□ -1.75
UBP10	YNL186W	YJL132W	P47014	750 aa		4.14	□□□□□ -1.75
UBP10	YNL186W	YNL092W	P53934	400 aa		4.14	□□□□□ -1.75
UBP10	YNL186W	ATG9	Q12142	997 aa		4.14	□□□□□ -1.75
UBP10	YNL186W	YDL007C-A	Q2V2Q0	85 aa		4.14	□□□□□ -1.75
UBP10	YNL186W	COX1	P00401	534 aa		4.14	□□□□□ -1.75
UBP10	YNL186W	RPP2A	P05319	106 aa	Known RBP	4.14	□□□□□ -1.75
UBP10	YNL186W	SPO7	P18410	259 aa		4.14	□□□□□ -1.75
UBP10	YNL186W	KGD2	P19262	463 aa	Predicted RBP	4.14	□□□□□ -1.75
UBP10	YNL186W	UBA1	P22515	1024 aa	Known RBP	4.14	□□□□□ -1.75
UBP10	YNL186W	ELO2	P25358	347 aa		4.14	□□□□□ -1.75
UBP10	YNL186W	RPT5	P33297	434 aa	Known RBP	4.14	□□□□□ -1.75
UBP10	YNL186W	PXL1	P36166	706 aa		4.14	□□□□□ -1.75
UBP10	YNL186W	MRPL4	P36517	319 aa		4.14	□□□□□ -1.75
UBP10	YNL186W	AAP1	P37898	856 aa	Known RBP	4.14	□□□□□ -1.75
UBP10	YNL186W	YBR053C	P38235	358 aa		4.14	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 59.1 ms