RNA–Protein interactions for RNA: YMR118C

SHH3, Transcript of Putative mitochondrial inner membrane protein of unknown function, yeastyeast

Gene SHH3, Length 591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHH3YMR118C GCV1P48015 400 aa3.45□□□□□ -1.86
SHH3YMR118C MSE1P48525 536 aa3.45□□□□□ -1.86
SHH3YMR118C IMD3P50095 523 aaKnown RBP3.45□□□□□ -1.86
SHH3YMR118C PSP2P50109 593 aaKnown RBP3.45□□□□□ -1.86
SHH3YMR118C DIA3P52290 468 aa3.45□□□□□ -1.86
SHH3YMR118C ALT2P52892 507 aa3.45□□□□□ -1.86
SHH3YMR118C MON1P53129 644 aa3.45□□□□□ -1.86
SHH3YMR118C SLD3P53135 668 aa3.45□□□□□ -1.86
SHH3YMR118C TWF1P53250 332 aa3.45□□□□□ -1.86
SHH3YMR118C TPO2P53283 614 aa3.45□□□□□ -1.86
SHH3YMR118C YGR283CP53336 341 aaPredicted RBP3.45□□□□□ -1.86
SHH3YMR118C ARE2P53629 642 aaKnown RBP3.45□□□□□ -1.86
SHH3YMR118C COG5P53951 403 aa3.45□□□□□ -1.86
SHH3YMR118C LSM3P57743 89 aaKnown RBP3.45□□□□□ -1.86
SHH3YMR118C SVL3Q03088 825 aaKnown RBP3.45□□□□□ -1.86
SHH3YMR118C YMR099CQ03161 297 aaKnown RBP3.45□□□□□ -1.86
SHH3YMR118C CSN9Q03981 162 aa3.45□□□□□ -1.86
SHH3YMR118C RRP17Q04031 235 aaPredicted RBP3.45□□□□□ -1.86
SHH3YMR118C ECM7Q06200 448 aa3.45□□□□□ -1.86
SHH3YMR118C MDM36Q06820 579 aa3.45□□□□□ -1.86
SHH3YMR118C YOL019WQ08157 551 aa3.45□□□□□ -1.86
SHH3YMR118C DIS3Q08162 1001 aaKnown RBP3.45□□□□□ -1.86
SHH3YMR118C YOL159CQ08300 171 aa3.45□□□□□ -1.86
SHH3YMR118C NRT1Q08485 598 aa3.45□□□□□ -1.86
SHH3YMR118C THP3Q12049 470 aaKnown RBP3.45□□□□□ -1.86
SHH3YMR118C SPE3Q12074 293 aaKnown RBP3.45□□□□□ -1.86
SHH3YMR118C HSP42Q12329 375 aa3.45□□□□□ -1.86
SHH3YMR118C ERG20P08524 352 aaKnown RBP3.44□□□□□ -1.86
SHH3YMR118C NFT1P0CE68 1218 aa3.44□□□□□ -1.86
SHH3YMR118C RPL4AP10664 362 aaKnown RBP3.44□□□□□ -1.86
SHH3YMR118C ABF1P14164 731 aa3.44□□□□□ -1.86
SHH3YMR118C HSP26P15992 214 aaKnown RBP RIP-Chip data3.44□□□□□ -1.86not detected
SHH3YMR118C CLN1P20437 546 aa3.44□□□□□ -1.86
SHH3YMR118C KGD1P20967 1014 aaKnown RBP3.44□□□□□ -1.86
SHH3YMR118C ATP12P22135 325 aa3.44□□□□□ -1.86
SHH3YMR118C HSP30P25619 332 aa3.44□□□□□ -1.86
SHH3YMR118C YCR090CP25654 182 aaKnown RBP3.44□□□□□ -1.86
SHH3YMR118C PHO91P27514 894 aa3.44□□□□□ -1.86
SHH3YMR118C YJU2P28320 278 aaPredicted RBP3.44□□□□□ -1.86
SHH3YMR118C SBA1P28707 216 aaKnown RBP3.44□□□□□ -1.86
SHH3YMR118C PMI40P29952 429 aaKnown RBP3.44□□□□□ -1.86
SHH3YMR118C MEI5P32489 222 aa3.44□□□□□ -1.86
SHH3YMR118C PRP19P32523 503 aaKnown RBP3.44□□□□□ -1.86
SHH3YMR118C PRP21P32524 280 aaPredicted RBP3.44□□□□□ -1.86
SHH3YMR118C PAH1P32567 862 aa3.44□□□□□ -1.86
SHH3YMR118C SMY2P32909 740 aaKnown RBP3.44□□□□□ -1.86
SHH3YMR118C VPS21P36017 210 aaKnown RBP3.44□□□□□ -1.86
SHH3YMR118C ABZ1P37254 787 aaPredicted RBP3.44□□□□□ -1.86
SHH3YMR118C ECM13P38195 257 aa3.44□□□□□ -1.86
SHH3YMR118C MUM2P38236 366 aa3.44□□□□□ -1.86
SHH3YMR118C ECM8P38246 354 aa3.44□□□□□ -1.86
SHH3YMR118C SLX1P38324 304 aa3.44□□□□□ -1.86
SHH3YMR118C YHR218WP38899 603 aa3.44□□□□□ -1.86
SHH3YMR118C FAD1P38913 306 aa3.44□□□□□ -1.86
SHH3YMR118C SWD1P39706 426 aa3.44□□□□□ -1.86
SHH3YMR118C GEM1P39722 662 aa3.44□□□□□ -1.86
SHH3YMR118C RBG1P39729 369 aa3.44□□□□□ -1.86
SHH3YMR118C YAT2P40017 923 aa3.44□□□□□ -1.86
SHH3YMR118C PAC11P40960 533 aa3.44□□□□□ -1.86
SHH3YMR118C VMA13P41807 478 aaKnown RBP3.44□□□□□ -1.86
SHH3YMR118C MAF1P41910 395 aa3.44□□□□□ -1.86
SHH3YMR118C RRT5P43607 289 aa3.44□□□□□ -1.86
SHH3YMR118C GUS1P46655 708 aaKnown RBP RIP-Chip data3.44□□□□□ -1.86not detected
SHH3YMR118C RTT101P47050 842 aa3.44□□□□□ -1.86
SHH3YMR118C RPL4BP49626 362 aaKnown RBP3.44□□□□□ -1.86
SHH3YMR118C ALT1P52893 592 aa3.44□□□□□ -1.86
SHH3YMR118C RAI1P53063 387 aaKnown RBP3.44□□□□□ -1.86
SHH3YMR118C SPC105P53148 917 aa3.44□□□□□ -1.86
SHH3YMR118C MNP1P53163 194 aaPredicted RBP3.44□□□□□ -1.86
SHH3YMR118C YGR053CP53234 283 aa3.44□□□□□ -1.86
SHH3YMR118C YGR127WP53275 312 aa3.44□□□□□ -1.86
SHH3YMR118C UGO1Q03327 502 aa3.44□□□□□ -1.86
SHH3YMR118C MZM1Q03429 123 aaPredicted RBP3.44□□□□□ -1.86
SHH3YMR118C NHX1Q04121 633 aa3.44□□□□□ -1.86
SHH3YMR118C MUS81Q04149 632 aaPredicted RBP3.44□□□□□ -1.86
SHH3YMR118C TRM12Q04235 462 aa3.44□□□□□ -1.86
SHH3YMR118C PEX12Q04370 399 aa3.44□□□□□ -1.86
SHH3YMR118C ARP10Q04549 284 aa3.44□□□□□ -1.86
SHH3YMR118C YPR196WQ06595 470 aa3.44□□□□□ -1.86
SHH3YMR118C ECM30Q06673 1274 aa3.44□□□□□ -1.86
SHH3YMR118C CDA2Q06703 312 aa3.44□□□□□ -1.86
SHH3YMR118C SYO1Q07395 620 aa3.44□□□□□ -1.86
SHH3YMR118C YLL032CQ07834 825 aaKnown RBP RIP-Chip data3.44□□□□□ -1.86not detected
SHH3YMR118C NGL1Q08213 363 aaKnown RBP3.44□□□□□ -1.86
SHH3YMR118C HFI1Q12060 488 aa3.44□□□□□ -1.86
SHH3YMR118C YPR027CQ12079 277 aa3.44□□□□□ -1.86
SHH3YMR118C HUA2Q12134 243 aa3.44□□□□□ -1.86
SHH3YMR118C PFK27Q12471 397 aaPredicted RBP3.44□□□□□ -1.86
SHH3YMR118C DCP1Q12517 231 aaPredicted RBP3.44□□□□□ -1.86
SHH3YMR118C EFG1Q3E705 233 aaKnown RBP3.44□□□□□ -1.86
SHH3YMR118C YOL159C-AQ3E769 90 aa3.44□□□□□ -1.86
SHH3YMR118C HKR1P41809 1802 aa3.44□□□□□ -1.86
SHH3YMR118C ARG3P05150 338 aa3.43□□□□□ -1.86
SHH3YMR118C GPH1P06738 902 aaKnown RBP3.43□□□□□ -1.86
SHH3YMR118C HTS1P07263 546 aaKnown RBP3.43□□□□□ -1.86
SHH3YMR118C PUT2P07275 575 aa3.43□□□□□ -1.86
SHH3YMR118C WHI2P12611 486 aa3.43□□□□□ -1.86
SHH3YMR118C TOP3P13099 656 aa3.43□□□□□ -1.86
SHH3YMR118C STF2P16965 84 aa3.43□□□□□ -1.86
SHH3YMR118C ART10P18634 518 aaKnown RBP3.43□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 15 ms