RNA–Protein interactions for RNA: YLR410W

VIP1, Transcript of Inositol hexakisphosphate and inositol heptakisphosphate kinase, yeast

Gene VIP1, Length 3,441 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VIP1	YLR410W	YJL107C	P42947	387 aa		3.37	□□□□□ -1.87
VIP1	YLR410W	YIP5	P53108	310 aa		3.37	□□□□□ -1.87
VIP1	YLR410W	DCP2	P53550	970 aa	Known RBP	3.37	□□□□□ -1.87
VIP1	YLR410W	HST1	P53685	503 aa		3.37	□□□□□ -1.87
VIP1	YLR410W	DUG3	P53871	357 aa		3.37	□□□□□ -1.87
VIP1	YLR410W	PFA5	Q03289	374 aa		3.37	□□□□□ -1.87
VIP1	YLR410W	YDR179W-A	Q03983	463 aa		3.37	□□□□□ -1.87
VIP1	YLR410W	APL4	Q12028	832 aa		3.37	□□□□□ -1.87
VIP1	YLR410W	TAF3	Q12297	353 aa		3.37	□□□□□ -1.87
VIP1	YLR410W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	3.36	□□□□□ -1.87	not detected
VIP1	YLR410W	ERG4	P25340	473 aa		3.36	□□□□□ -1.87
VIP1	YLR410W	PDB1	P32473	366 aa	Known RBP	3.36	□□□□□ -1.87
VIP1	YLR410W	YPT10	P38146	199 aa		3.36	□□□□□ -1.87
VIP1	YLR410W	SUL1	P38359	859 aa		3.36	□□□□□ -1.87
VIP1	YLR410W	RRF1	P38771	230 aa		3.36	□□□□□ -1.87
VIP1	YLR410W	MSY1	P48527	492 aa		3.36	□□□□□ -1.87
VIP1	YLR410W	ALT2	P52892	507 aa		3.36	□□□□□ -1.87
VIP1	YLR410W	YNL058C	P53947	316 aa		3.36	□□□□□ -1.87
VIP1	YLR410W	PLM2	Q04383	521 aa		3.36	□□□□□ -1.87
VIP1	YLR410W	PHO92	Q06390	306 aa		3.36	□□□□□ -1.87
VIP1	YLR410W	ATG23	Q06671	453 aa		3.36	□□□□□ -1.87
VIP1	YLR410W	INP53	Q12271	1107 aa		3.36	□□□□□ -1.87
VIP1	YLR410W	HIP1	P06775	603 aa		3.36	□□□□□ -1.87
VIP1	YLR410W	ART10	P18634	518 aa	Known RBP	3.36	□□□□□ -1.87
VIP1	YLR410W	SWH1	P35845	1188 aa		3.36	□□□□□ -1.87
VIP1	YLR410W	CWC22	P53333	577 aa	Known RBP	3.36	□□□□□ -1.87
VIP1	YLR410W	RPS15	Q01855	142 aa	Known RBP	3.36	□□□□□ -1.87
VIP1	YLR410W	WAR1	Q03631	944 aa		3.36	□□□□□ -1.87
VIP1	YLR410W	RQC1	Q05468	723 aa	Known RBP	3.36	□□□□□ -1.87
VIP1	YLR410W	YER145C-A	A0A023PYF4	145 aa		3.35	□□□□□ -1.87
VIP1	YLR410W	PRP2	P20095	876 aa	Predicted RBP	3.35	□□□□□ -1.87
VIP1	YLR410W	HRR25	P29295	494 aa	Known RBP	3.35	□□□□□ -1.87
VIP1	YLR410W	AFG1	P32317	509 aa		3.35	□□□□□ -1.87
VIP1	YLR410W	MRE11	P32829	692 aa		3.35	□□□□□ -1.87
VIP1	YLR410W	SUR1	P33300	382 aa		3.35	□□□□□ -1.87
VIP1	YLR410W	HES1	P35843	434 aa		3.35	□□□□□ -1.87
VIP1	YLR410W	OMA1	P36163	345 aa		3.35	□□□□□ -1.87
VIP1	YLR410W	MSR1	P38714	643 aa		3.35	□□□□□ -1.87
VIP1	YLR410W	TSC11	P40061	1430 aa		3.35	□□□□□ -1.87
VIP1	YLR410W	NAS2	P40555	220 aa		3.35	□□□□□ -1.87
VIP1	YLR410W	DPB11	P47027	764 aa	Predicted RBP	3.35	□□□□□ -1.87
VIP1	YLR410W	NET1	P47035	1189 aa		3.35	□□□□□ -1.87
VIP1	YLR410W	DIS3	Q08162	1001 aa	Known RBP	3.35	□□□□□ -1.87
VIP1	YLR410W	FRE3	Q08905	711 aa		3.35	□□□□□ -1.87
VIP1	YLR410W	LCB4	Q12246	624 aa		3.35	□□□□□ -1.87
VIP1	YLR410W	YLR358C	O13565	187 aa		3.35	□□□□□ -1.87
VIP1	YLR410W	YBL055C	P34220	418 aa	Predicted RBP	3.35	□□□□□ -1.87
VIP1	YLR410W	SKN7	P38889	622 aa		3.35	□□□□□ -1.87
VIP1	YLR410W	YFR016C	P43597	1233 aa	Known RBP	3.35	□□□□□ -1.87
VIP1	YLR410W	YGR149W	P48236	432 aa		3.35	□□□□□ -1.87
VIP1	YLR410W	ORC3	P54790	616 aa		3.35	□□□□□ -1.87
VIP1	YLR410W	RSM23	Q01163	450 aa		3.35	□□□□□ -1.87
VIP1	YLR410W	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	3.35	□□□□□ -1.87	not detected
VIP1	YLR410W	EMI2	Q04409	500 aa	Known RBP	3.35	□□□□□ -1.87
VIP1	YLR410W	LEU9	Q12166	604 aa	Known RBP	3.35	□□□□□ -1.87
VIP1	YLR410W	PFK27	Q12471	397 aa	Predicted RBP	3.35	□□□□□ -1.87
VIP1	YLR410W	Q0010	Q9ZZX9	128 aa		3.35	□□□□□ -1.87
VIP1	YLR410W	GDB1	Q06625	1536 aa		3.35	□□□□□ -1.87
VIP1	YLR410W	ELO1	P39540	310 aa		3.35	□□□□□ -1.87
VIP1	YLR410W	ECM10	P39987	644 aa		3.35	□□□□□ -1.87
VIP1	YLR410W	FMP52	P40008	231 aa		3.35	□□□□□ -1.87
VIP1	YLR410W	MRX1	P40050	688 aa		3.35	□□□□□ -1.87
VIP1	YLR410W	VPS73	P53142	486 aa	Known RBP	3.35	□□□□□ -1.87
VIP1	YLR410W	EFM6	P53970	246 aa		3.35	□□□□□ -1.87
VIP1	YLR410W	ELO2	P25358	347 aa		3.34	□□□□□ -1.87
VIP1	YLR410W	PIH1	P38768	344 aa		3.34	□□□□□ -1.87
VIP1	YLR410W	ASG1	P40467	964 aa		3.34	□□□□□ -1.87
VIP1	YLR410W	STB2	P46679	850 aa		3.34	□□□□□ -1.87
VIP1	YLR410W	RBA50	Q04418	439 aa		3.34	□□□□□ -1.87
VIP1	YLR410W	RRP9	Q06506	573 aa	Known RBP	3.34	□□□□□ -1.87
VIP1	YLR410W	STH1	P32597	1359 aa		3.34	□□□□□ -1.87
VIP1	YLR410W	GAL7	P08431	366 aa		3.34	□□□□□ -1.87
VIP1	YLR410W	DAD2	P36162	133 aa		3.34	□□□□□ -1.87
VIP1	YLR410W	VMA13	P41807	478 aa	Known RBP	3.34	□□□□□ -1.87
VIP1	YLR410W	BUL1	P48524	976 aa		3.34	□□□□□ -1.87
VIP1	YLR410W	ACL4	Q03771	387 aa		3.34	□□□□□ -1.87
VIP1	YLR410W	VTA1	Q06263	330 aa		3.34	□□□□□ -1.87
VIP1	YLR410W	CRT10	Q08226	957 aa		3.34	□□□□□ -1.87
VIP1	YLR410W	YPL272C	Q08984	517 aa		3.34	□□□□□ -1.87
VIP1	YLR410W	ATG9	Q12142	997 aa		3.34	□□□□□ -1.87
VIP1	YLR410W	PRP6	P19735	899 aa	Predicted RBP	3.34	□□□□□ -1.88
VIP1	YLR410W	SRP54	P20424	541 aa	Known RBP	3.34	□□□□□ -1.88
VIP1	YLR410W	SPB1	P25582	841 aa	Predicted RBP	3.34	□□□□□ -1.88
VIP1	YLR410W	GAC1	P28006	793 aa		3.34	□□□□□ -1.88
VIP1	YLR410W	KEL1	P38853	1164 aa	Known RBP	3.34	□□□□□ -1.88
VIP1	YLR410W	NDC80	P40460	691 aa		3.34	□□□□□ -1.88
VIP1	YLR410W	AQR1	P53943	586 aa		3.34	□□□□□ -1.88
VIP1	YLR410W	BOP3	P53958	396 aa		3.34	□□□□□ -1.88
VIP1	YLR410W	INA17	Q02888	182 aa		3.34	□□□□□ -1.88
VIP1	YLR410W	YMR130W	Q04223	302 aa		3.34	□□□□□ -1.88
VIP1	YLR410W	AIM39	Q08223	395 aa		3.34	□□□□□ -1.88
VIP1	YLR410W	SIR3	P06701	978 aa		3.33	□□□□□ -1.88
VIP1	YLR410W	STE3	P06783	470 aa		3.33	□□□□□ -1.88
VIP1	YLR410W	RPL31B	P0C2H9	113 aa	Known RBP	3.33	□□□□□ -1.88
VIP1	YLR410W	PCT1	P13259	424 aa		3.33	□□□□□ -1.88
VIP1	YLR410W	PUB1	P32588	453 aa	Known RBP RIP-Chip data	3.33	□□□□□ -1.88	not detected
VIP1	YLR410W	RPL32	P38061	130 aa	Known RBP	3.33	□□□□□ -1.88
VIP1	YLR410W	NTC20	P38302	140 aa	Predicted RBP	3.33	□□□□□ -1.88
VIP1	YLR410W	VBA2	P38358	474 aa	Known RBP	3.33	□□□□□ -1.88
VIP1	YLR410W	YMR124W	P39523	943 aa	Known RBP	3.33	□□□□□ -1.88

Retrieved 100 of 5,963 RNA–protein pairs in 40.4 ms