RNA–Protein interactions for RNA: YLR410W

VIP1, Transcript of Inositol hexakisphosphate and inositol heptakisphosphate kinase, yeast

Gene VIP1, Length 3,441 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VIP1	YLR410W	DRS1	P32892	752 aa	Known RBP	8.76	□□□□□ -1.01
VIP1	YLR410W	MTC1	P47018	478 aa	Known RBP	7.93	□□□□□ -1.14
VIP1	YLR410W	BFR2	Q06631	534 aa	Known RBP	7.87	□□□□□ -1.15
VIP1	YLR410W	TFA1	P36100	482 aa		7.65	□□□□□ -1.18
VIP1	YLR410W	DIP2	Q12220	943 aa	Predicted RBP	7.17	□□□□□ -1.26
VIP1	YLR410W	RQC2	Q12532	1038 aa	Known RBP	7.14	□□□□□ -1.27
VIP1	YLR410W	AVT3	P36062	692 aa		7.13	□□□□□ -1.27
VIP1	YLR410W	DMA1	P38823	416 aa		6.74	□□□□□ -1.33
VIP1	YLR410W	TAF7	Q05021	590 aa		6.63	□□□□□ -1.35
VIP1	YLR410W	PTP3	P40048	928 aa		6.56	□□□□□ -1.36
VIP1	YLR410W	RSE1	Q04693	1361 aa	Known RBP	6.55	□□□□□ -1.36
VIP1	YLR410W	RPL17A	P05740	184 aa	Known RBP	6.37	□□□□□ -1.39
VIP1	YLR410W	RPL17B	P46990	184 aa	Known RBP	6.37	□□□□□ -1.39
VIP1	YLR410W	ISW2	Q08773	1120 aa		6.29	□□□□□ -1.4
VIP1	YLR410W	RPG1	P38249	964 aa	Known RBP	6.28	□□□□□ -1.4
VIP1	YLR410W	REB1	P21538	810 aa		6.22	□□□□□ -1.41
VIP1	YLR410W	LEO1	P38439	464 aa		6.19	□□□□□ -1.42
VIP1	YLR410W	YAH1	Q12184	172 aa	Known RBP	6.18	□□□□□ -1.42
VIP1	YLR410W	SSP1	P38871	571 aa		6.16	□□□□□ -1.42
VIP1	YLR410W	RIM101	P33400	625 aa		6.04	□□□□□ -1.44
VIP1	YLR410W	SPT21	P35209	758 aa		6.02	□□□□□ -1.45
VIP1	YLR410W	FAP1	P53971	965 aa		5.99	□□□□□ -1.45
VIP1	YLR410W	OXP1	P28273	1286 aa		5.99	□□□□□ -1.45
VIP1	YLR410W	DMA2	P53924	522 aa		5.98	□□□□□ -1.45
VIP1	YLR410W	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	5.97	□□□□□ -1.45	not detected
VIP1	YLR410W	YIL055C	P40523	627 aa	Known RBP	5.96	□□□□□ -1.46
VIP1	YLR410W	PRI1	P10363	409 aa		5.95	□□□□□ -1.46
VIP1	YLR410W	YLR271W	Q06152	274 aa		5.94	□□□□□ -1.46
VIP1	YLR410W	LEU3	P08638	886 aa		5.93	□□□□□ -1.46
VIP1	YLR410W	TSR3	Q12094	313 aa	Known RBP	5.89	□□□□□ -1.47
VIP1	YLR410W	SAS10	Q12136	610 aa	Predicted RBP	5.87	□□□□□ -1.47
VIP1	YLR410W	CST9	Q06032	482 aa		5.86	□□□□□ -1.47
VIP1	YLR410W	AAD16	Q02895	342 aa		5.83	□□□□□ -1.48
VIP1	YLR410W	MGA2	P40578	1113 aa		5.82	□□□□□ -1.48
VIP1	YLR410W	SPB4	P25808	606 aa	Predicted RBP	5.8	□□□□□ -1.48
VIP1	YLR410W	RSM7	P47150	247 aa		5.78	□□□□□ -1.48
VIP1	YLR410W	HO	P09932	586 aa		5.77	□□□□□ -1.49
VIP1	YLR410W	DCD1	P06773	312 aa		5.77	□□□□□ -1.49
VIP1	YLR410W	ABP1	P15891	592 aa	Known RBP	5.77	□□□□□ -1.49
VIP1	YLR410W	RPN1	P38764	993 aa	Known RBP	5.77	□□□□□ -1.49
VIP1	YLR410W	VPS70	P47161	811 aa		5.74	□□□□□ -1.49
VIP1	YLR410W	YKR023W	P36119	530 aa	Known RBP	5.73	□□□□□ -1.49
VIP1	YLR410W	SET1	P38827	1080 aa	Known RBP	5.66	□□□□□ -1.5
VIP1	YLR410W	AI2	P03876	854 aa		5.65	□□□□□ -1.5
VIP1	YLR410W	RAM2	P29703	316 aa		5.65	□□□□□ -1.5
VIP1	YLR410W	RLF2	Q12495	606 aa		5.65	□□□□□ -1.51
VIP1	YLR410W	RCR1	P38212	213 aa		5.63	□□□□□ -1.51
VIP1	YLR410W	PSD2	P53037	1138 aa	Known RBP	5.62	□□□□□ -1.51
VIP1	YLR410W	TFC8	Q12308	588 aa		5.61	□□□□□ -1.51
VIP1	YLR410W	MRM1	P25270	412 aa		5.58	□□□□□ -1.52
VIP1	YLR410W	CKB1	P43639	278 aa		5.58	□□□□□ -1.52
VIP1	YLR410W	GLC3	P32775	704 aa		5.57	□□□□□ -1.52
VIP1	YLR410W	PRY3	P47033	881 aa		5.57	□□□□□ -1.52
VIP1	YLR410W	KIN1	P13185	1064 aa		5.55	□□□□□ -1.52
VIP1	YLR410W	MRPL32	P25348	183 aa		5.55	□□□□□ -1.52
VIP1	YLR410W	BBC1	P47068	1157 aa		5.54	□□□□□ -1.52
VIP1	YLR410W	CDC27	P38042	758 aa		5.52	□□□□□ -1.53
VIP1	YLR410W	BCH2	P36122	765 aa		5.52	□□□□□ -1.53
VIP1	YLR410W	PBS2	P08018	668 aa		5.51	□□□□□ -1.53
VIP1	YLR410W	IES2	P40154	320 aa		5.48	□□□□□ -1.53
VIP1	YLR410W	YPR148C	Q06523	435 aa		5.47	□□□□□ -1.53
VIP1	YLR410W	DSF2	P38213	736 aa		5.46	□□□□□ -1.54
VIP1	YLR410W	GUA1	P38625	525 aa	Known RBP	5.45	□□□□□ -1.54
VIP1	YLR410W	DIT2	P21595	489 aa		5.45	□□□□□ -1.54
VIP1	YLR410W	EPS1	P40557	701 aa		5.45	□□□□□ -1.54
VIP1	YLR410W	MAM3	Q12296	706 aa		5.44	□□□□□ -1.54
VIP1	YLR410W	MIF2	P35201	549 aa		5.43	□□□□□ -1.54
VIP1	YLR410W	IFH1	P39520	1085 aa		5.43	□□□□□ -1.54
VIP1	YLR410W	YNR021W	P53723	404 aa	Known RBP	5.43	□□□□□ -1.54
VIP1	YLR410W	RTG3	P38165	486 aa		5.41	□□□□□ -1.54
VIP1	YLR410W	COQ8	P27697	501 aa		5.41	□□□□□ -1.54
VIP1	YLR410W	HGH1	P48362	394 aa	Known RBP	5.41	□□□□□ -1.54
VIP1	YLR410W	ATF2	P53296	535 aa		5.41	□□□□□ -1.54
VIP1	YLR410W	YML020W	Q03722	664 aa		5.4	□□□□□ -1.54
VIP1	YLR410W	MAK11	P20484	414 aa	Known RBP	5.39	□□□□□ -1.55
VIP1	YLR410W	BDF1	P35817	686 aa		5.39	□□□□□ -1.55
VIP1	YLR410W	TFB3	Q03290	321 aa		5.37	□□□□□ -1.55
VIP1	YLR410W	SCY1	P53009	804 aa		5.37	□□□□□ -1.55
VIP1	YLR410W	YFR006W	P43590	535 aa		5.36	□□□□□ -1.55
VIP1	YLR410W	PKC1	P24583	1151 aa		5.35	□□□□□ -1.55
VIP1	YLR410W	REF2	P42073	533 aa	Predicted RBP	5.35	□□□□□ -1.55
VIP1	YLR410W	NUP42	P49686	430 aa	Known RBP	5.35	□□□□□ -1.55
VIP1	YLR410W	YJL007C	P47080	104 aa		5.33	□□□□□ -1.56
VIP1	YLR410W	AIM7	Q12156	149 aa		5.33	□□□□□ -1.56
VIP1	YLR410W	EDS1	P38073	919 aa		5.33	□□□□□ -1.56
VIP1	YLR410W	VPS29	P38759	282 aa		5.32	□□□□□ -1.56
VIP1	YLR410W	SLX8	P40072	274 aa		5.31	□□□□□ -1.56
VIP1	YLR410W	SSA1	P10591	642 aa	Known RBP	5.29	□□□□□ -1.56
VIP1	YLR410W	VHR2	P40041	505 aa		5.29	□□□□□ -1.56
VIP1	YLR410W	PIB1	Q06651	286 aa		5.29	□□□□□ -1.56
VIP1	YLR410W	BRL1	P38770	471 aa		5.28	□□□□□ -1.56
VIP1	YLR410W	STS1	P38637	319 aa		5.28	□□□□□ -1.56
VIP1	YLR410W	BIM1	P40013	344 aa		5.27	□□□□□ -1.57
VIP1	YLR410W	SUB2	Q07478	446 aa	Known RBP	5.27	□□□□□ -1.57
VIP1	YLR410W	ERG12	P07277	443 aa		5.27	□□□□□ -1.57
VIP1	YLR410W	ATG32	P40458	529 aa		5.26	□□□□□ -1.57
VIP1	YLR410W	DBP1	P24784	617 aa	Known RBP	5.26	□□□□□ -1.57
VIP1	YLR410W	GEF1	P37020	779 aa		5.26	□□□□□ -1.57
VIP1	YLR410W	RPL34B	P40525	121 aa	Known RBP	5.25	□□□□□ -1.57
VIP1	YLR410W	MAK21	Q12176	1025 aa	Known RBP	5.25	□□□□□ -1.57

Retrieved 100 of 5,963 RNA–protein pairs in 9.6 ms