RNA–Protein interactions for RNA: YLR398C

SKI2, Transcript of Ski complex component and putative RNA helicase, yeastyeast

Gene SKI2, Length 3,864 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKI2YLR398C CAF40P53829 373 aa6.11□□□□□ -1.43
SKI2YLR398C RUB1Q03919 77 aa6.11□□□□□ -1.43
SKI2YLR398C CBC2Q08920 208 aaKnown RBP RIP-Chip data6.11□□□□□ -1.43not detected
SKI2YLR398C SPE3Q12074 293 aaKnown RBP6.11□□□□□ -1.43
SKI2YLR398C TPK1P06244 397 aa6.11□□□□□ -1.43
SKI2YLR398C MNE1P24720 663 aa6.11□□□□□ -1.43
SKI2YLR398C CSM1P25651 190 aa6.11□□□□□ -1.43
SKI2YLR398C NTH1P32356 751 aa6.11□□□□□ -1.43
SKI2YLR398C BIO2P32451 375 aa6.11□□□□□ -1.43
SKI2YLR398C STE5P32917 917 aa6.11□□□□□ -1.43
SKI2YLR398C LHP1P33399 275 aaKnown RBP6.11□□□□□ -1.43
SKI2YLR398C SPO23P33757 523 aa6.11□□□□□ -1.43
SKI2YLR398C YAP1801P38856 637 aa6.11□□□□□ -1.43
SKI2YLR398C PKP1P40530 394 aa6.11□□□□□ -1.43
SKI2YLR398C SNF12P53628 566 aa6.11□□□□□ -1.43
SKI2YLR398C SCS7Q03529 384 aa6.11□□□□□ -1.43
SKI2YLR398C TVP15Q03860 143 aa6.11□□□□□ -1.43
SKI2YLR398C CRT10Q08226 957 aa6.11□□□□□ -1.43
SKI2YLR398C ATP1P07251 545 aaKnown RBP6.11□□□□□ -1.43
SKI2YLR398C RAD54P32863 898 aa6.11□□□□□ -1.43
SKI2YLR398C TEF4P36008 412 aaKnown RBP6.11□□□□□ -1.43
SKI2YLR398C YNK1P36010 153 aaKnown RBP6.11□□□□□ -1.43
SKI2YLR398C YBR032WP38223 100 aa6.11□□□□□ -1.43
SKI2YLR398C RFC4P40339 323 aaKnown RBP6.11□□□□□ -1.43
SKI2YLR398C RRN9P53437 365 aa6.11□□□□□ -1.43
SKI2YLR398C NUP116Q02630 1113 aa6.11□□□□□ -1.43
SKI2YLR398C VHS1Q03785 461 aa6.11□□□□□ -1.43
SKI2YLR398C YEH1Q07804 573 aa6.11□□□□□ -1.43
SKI2YLR398C FMP40Q08968 688 aaPredicted RBP6.11□□□□□ -1.43
SKI2YLR398C HSH49Q99181 213 aaPredicted RBP6.11□□□□□ -1.43
SKI2YLR398C BEM2P39960 2167 aaKnown RBP6.1□□□□□ -1.43
SKI2YLR398C RPS9AO13516 197 aaKnown RBP6.1□□□□□ -1.43
SKI2YLR398C YER152CP10356 443 aa6.1□□□□□ -1.43
SKI2YLR398C PMT2P31382 759 aa6.1□□□□□ -1.43
SKI2YLR398C SEC61P32915 480 aa6.1□□□□□ -1.43
SKI2YLR398C CAF4P36130 643 aa6.1□□□□□ -1.43
SKI2YLR398C COG3P40094 801 aa6.1□□□□□ -1.43
SKI2YLR398C ROM1P53046 1155 aa6.1□□□□□ -1.43
SKI2YLR398C YGR026WP53217 278 aa6.1□□□□□ -1.43
SKI2YLR398C COS1P53822 381 aa6.1□□□□□ -1.43
SKI2YLR398C GSF2Q04697 403 aaKnown RBP6.1□□□□□ -1.43
SKI2YLR398C GPN3Q06543 272 aa6.1□□□□□ -1.43
SKI2YLR398C APC5Q08683 685 aa6.1□□□□□ -1.43
SKI2YLR398C HEM2P05373 342 aa6.1□□□□□ -1.43
SKI2YLR398C BCH2P36122 765 aa6.1□□□□□ -1.43
SKI2YLR398C NDT80P38830 627 aa6.1□□□□□ -1.43
SKI2YLR398C GAA1P39012 614 aa6.1□□□□□ -1.43
SKI2YLR398C EDC3P39998 551 aaKnown RBP6.1□□□□□ -1.43
SKI2YLR398C RET2P43621 546 aa6.1□□□□□ -1.43
SKI2YLR398C ROK1P45818 564 aaPredicted RBP6.1□□□□□ -1.43
SKI2YLR398C LYS20P48570 428 aaKnown RBP6.1□□□□□ -1.43
SKI2YLR398C PYK2P52489 506 aaKnown RBP6.1□□□□□ -1.43
SKI2YLR398C ARA2Q04212 335 aa6.1□□□□□ -1.43
SKI2YLR398C HSP31Q04432 237 aa6.1□□□□□ -1.43
SKI2YLR398C YDL057WQ07379 328 aa6.1□□□□□ -1.43
SKI2YLR398C PUS9Q12069 462 aa6.1□□□□□ -1.43
SKI2YLR398C SNU23Q12368 194 aaPredicted RBP6.1□□□□□ -1.43
SKI2YLR398C MAS1P10507 462 aa6.1□□□□□ -1.43
SKI2YLR398C VMA1P17255 1071 aaKnown RBP6.1□□□□□ -1.43
SKI2YLR398C GID7P25569 745 aa6.1□□□□□ -1.43
SKI2YLR398C ALG3P38179 458 aa6.1□□□□□ -1.43
SKI2YLR398C MDM31P38880 579 aa6.1□□□□□ -1.43
SKI2YLR398C AXL2P38928 823 aa6.1□□□□□ -1.43
SKI2YLR398C FIR1P40020 876 aa6.1□□□□□ -1.43
SKI2YLR398C ARC1P46672 376 aaKnown RBP6.1□□□□□ -1.43
SKI2YLR398C YMR099CQ03161 297 aaKnown RBP6.1□□□□□ -1.43
SKI2YLR398C YDR124WQ04608 324 aa6.1□□□□□ -1.43
SKI2YLR398C RCO1Q04779 684 aa6.1□□□□□ -1.43
SKI2YLR398C YOL159CQ08300 171 aa6.1□□□□□ -1.43
SKI2YLR398C YLR049CQ12110 428 aa6.1□□□□□ -1.43
SKI2YLR398C HMS1Q12398 434 aa6.1□□□□□ -1.43
SKI2YLR398C PFK27Q12471 397 aaPredicted RBP6.1□□□□□ -1.43
SKI2YLR398C CKA2P19454 339 aa6.09□□□□□ -1.43
SKI2YLR398C DIT1P21623 536 aa6.09□□□□□ -1.43
SKI2YLR398C SGV1P23293 657 aaKnown RBP6.09□□□□□ -1.43
SKI2YLR398C SIP1P32578 815 aa6.09□□□□□ -1.43
SKI2YLR398C CCC2P38995 1004 aa6.09□□□□□ -1.43
SKI2YLR398C CIN1P40987 1014 aa6.09□□□□□ -1.43
SKI2YLR398C YGL039WP53183 348 aaKnown RBP6.09□□□□□ -1.43
SKI2YLR398C OKP1P53298 406 aa6.09□□□□□ -1.43
SKI2YLR398C ARP4P80428 489 aa6.09□□□□□ -1.43
SKI2YLR398C SIZ1Q04195 904 aa6.09□□□□□ -1.43
SKI2YLR398C FAL1Q12099 399 aaKnown RBP6.09□□□□□ -1.43
SKI2YLR398C YCL001W-BQ96VH2 84 aa6.09□□□□□ -1.43
SKI2YLR398C MTR10Q99189 972 aa6.09□□□□□ -1.43
SKI2YLR398C MED11Q99278 115 aa6.09□□□□□ -1.43
SKI2YLR398C GCN4P03069 281 aa6.09□□□□□ -1.43
SKI2YLR398C RHO2P06781 192 aa6.09□□□□□ -1.43
SKI2YLR398C DFR1P07807 211 aaKnown RBP RIP-Chip data6.09□□□□□ -1.43not detected
SKI2YLR398C FUR1P18562 216 aaKnown RBP6.09□□□□□ -1.43
SKI2YLR398C YSP3P25036 478 aa6.09□□□□□ -1.43
SKI2YLR398C GBP2P25555 427 aaKnown RBP RIP-Chip data6.09□□□□□ -1.43not detected
SKI2YLR398C HXT1P32465 570 aa6.09□□□□□ -1.43
SKI2YLR398C EUG1P32474 517 aa6.09□□□□□ -1.43
SKI2YLR398C UIP5P36137 443 aa6.09□□□□□ -1.43
SKI2YLR398C PCS60P38137 543 aaKnown RBP RIP-Chip data6.09□□□□□ -1.43 RIP-Chip
SKI2YLR398C FAD1P38913 306 aa6.09□□□□□ -1.43
SKI2YLR398C ROG3P43602 733 aa6.09□□□□□ -1.43
SKI2YLR398C RBG2P53295 368 aaKnown RBP6.09□□□□□ -1.43
SKI2YLR398C CWC24P53769 259 aa6.09□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 60.6 ms