RNA–Protein interactions for RNA: YIL144W

NDC80, Transcript of Component of the kinetochore-associated Ndc80 complex, yeast

Gene NDC80, Length 2,076 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NDC80	YIL144W	KRS1	P15180	591 aa	Known RBP	3.34	□□□□□ -1.87
NDC80	YIL144W	ARC19	P33204	171 aa	Known RBP	3.34	□□□□□ -1.87
NDC80	YIL144W	PIM1	P36775	1133 aa		3.34	□□□□□ -1.87
NDC80	YIL144W	RPN11	P43588	306 aa	Known RBP	3.34	□□□□□ -1.87
NDC80	YIL144W	ROK1	P45818	564 aa	Predicted RBP	3.34	□□□□□ -1.87
NDC80	YIL144W	SMD2	Q06217	110 aa	Known RBP	3.34	□□□□□ -1.87
NDC80	YIL144W	NOP6	Q07623	225 aa	Known RBP	3.34	□□□□□ -1.87
NDC80	YIL144W	RPN5	Q12250	445 aa	Known RBP	3.34	□□□□□ -1.87
NDC80	YIL144W	YRF1-4	O13559	1382 aa		3.34	□□□□□ -1.87
NDC80	YIL144W	GPA1	P08539	472 aa		3.34	□□□□□ -1.88
NDC80	YIL144W	HOM2	P13663	365 aa	Known RBP	3.34	□□□□□ -1.88
NDC80	YIL144W	CPR2	P23285	205 aa		3.34	□□□□□ -1.88
NDC80	YIL144W	GRR1	P24814	1151 aa		3.34	□□□□□ -1.88
NDC80	YIL144W	YCR051W	P25631	222 aa		3.34	□□□□□ -1.88
NDC80	YIL144W	ERV1	P27882	189 aa		3.34	□□□□□ -1.88
NDC80	YIL144W	MSP1	P28737	362 aa		3.34	□□□□□ -1.88
NDC80	YIL144W	SYN8	P31377	255 aa		3.34	□□□□□ -1.88
NDC80	YIL144W	NTG1	P31378	399 aa		3.34	□□□□□ -1.88
NDC80	YIL144W	PDB1	P32473	366 aa	Known RBP	3.34	□□□□□ -1.88
NDC80	YIL144W	DAD2	P36162	133 aa		3.34	□□□□□ -1.88
NDC80	YIL144W	TIF5	P38431	405 aa	Known RBP	3.34	□□□□□ -1.88
NDC80	YIL144W	ARP1	P38696	384 aa		3.34	□□□□□ -1.88
NDC80	YIL144W	YER034W	P40022	185 aa	Known RBP	3.34	□□□□□ -1.88
NDC80	YIL144W	RGI2	P40188	164 aa		3.34	□□□□□ -1.88
NDC80	YIL144W	VMA13	P41807	478 aa	Known RBP	3.34	□□□□□ -1.88
NDC80	YIL144W	EPL1	P43572	832 aa		3.34	□□□□□ -1.88
NDC80	YIL144W	CTK2	P46962	323 aa		3.34	□□□□□ -1.88
NDC80	YIL144W	BSP1	Q06604	576 aa		3.34	□□□□□ -1.88
NDC80	YIL144W	THI3	Q07471	609 aa		3.34	□□□□□ -1.88
NDC80	YIL144W	ARD1	P07347	238 aa	Predicted RBP	3.33	□□□□□ -1.88
NDC80	YIL144W	DAP2	P18962	818 aa		3.33	□□□□□ -1.88
NDC80	YIL144W	MBR1	P23493	339 aa		3.33	□□□□□ -1.88
NDC80	YIL144W	CLB3	P24870	427 aa		3.33	□□□□□ -1.88
NDC80	YIL144W	PHO84	P25297	587 aa	Known RBP	3.33	□□□□□ -1.88
NDC80	YIL144W	YBL029W	P38201	376 aa		3.33	□□□□□ -1.88
NDC80	YIL144W	YBL028C	P38202	106 aa		3.33	□□□□□ -1.88
NDC80	YIL144W	YNG2	P38806	282 aa	Known RBP	3.33	□□□□□ -1.88
NDC80	YIL144W	YDR089W	P38966	869 aa		3.33	□□□□□ -1.88
NDC80	YIL144W	MET28	P40573	187 aa		3.33	□□□□□ -1.88
NDC80	YIL144W	GLO1	P50107	326 aa		3.33	□□□□□ -1.88
NDC80	YIL144W	SNU56	Q03782	492 aa	Known RBP	3.33	□□□□□ -1.88
NDC80	YIL144W	ARX1	Q03862	593 aa	Known RBP	3.33	□□□□□ -1.88
NDC80	YIL144W	YLR455W	Q06188	304 aa		3.33	□□□□□ -1.88
NDC80	YIL144W	RRT8	Q08219	342 aa		3.33	□□□□□ -1.88
NDC80	YIL144W	GAL4	P04386	881 aa		3.32	□□□□□ -1.88
NDC80	YIL144W	YML002W	P0CF17	737 aa		3.32	□□□□□ -1.88
NDC80	YIL144W	YUH1	P35127	236 aa		3.32	□□□□□ -1.88
NDC80	YIL144W	MRPL40	P36534	297 aa		3.32	□□□□□ -1.88
NDC80	YIL144W	YSW1	P38280	609 aa		3.32	□□□□□ -1.88
NDC80	YIL144W	DED81	P38707	554 aa	Known RBP	3.32	□□□□□ -1.88
NDC80	YIL144W	PKP1	P40530	394 aa		3.32	□□□□□ -1.88
NDC80	YIL144W	RPS7B	P48164	190 aa	Known RBP	3.32	□□□□□ -1.88
NDC80	YIL144W	PDR16	P53860	351 aa	Known RBP	3.32	□□□□□ -1.88
NDC80	YIL144W	EAF7	P53911	425 aa	Known RBP	3.32	□□□□□ -1.88
NDC80	YIL144W	ROY1	Q04847	553 aa		3.32	□□□□□ -1.88
NDC80	YIL144W	KAP95	Q06142	861 aa	Known RBP	3.32	□□□□□ -1.88
NDC80	YIL144W	LUC7	Q07508	261 aa	Predicted RBP	3.32	□□□□□ -1.88
NDC80	YIL144W	YOR389W	Q08912	624 aa		3.32	□□□□□ -1.88
NDC80	YIL144W	RUD3	Q12234	484 aa	Known RBP	3.32	□□□□□ -1.88
NDC80	YIL144W	HER1	Q12276	1246 aa		3.32	□□□□□ -1.88
NDC80	YIL144W	YPT6	Q99260	215 aa		3.32	□□□□□ -1.88
NDC80	YIL144W	TUB1	P09733	447 aa	Known RBP	3.32	□□□□□ -1.88
NDC80	YIL144W	TKL1	P23254	680 aa	Known RBP	3.32	□□□□□ -1.88
NDC80	YIL144W	PHO91	P27514	894 aa		3.32	□□□□□ -1.88
NDC80	YIL144W	SOF1	P33750	489 aa	Known RBP	3.32	□□□□□ -1.88
NDC80	YIL144W	YHR054C	P38780	354 aa		3.32	□□□□□ -1.88
NDC80	YIL144W	BUR6	P40096	142 aa		3.32	□□□□□ -1.88
NDC80	YIL144W	ASG1	P40467	964 aa		3.32	□□□□□ -1.88
NDC80	YIL144W	AAT1	Q01802	451 aa		3.32	□□□□□ -1.88
NDC80	YIL144W	MRD1	Q06106	887 aa	Known RBP	3.32	□□□□□ -1.88
NDC80	YIL144W	YEH1	Q07804	573 aa		3.32	□□□□□ -1.88
NDC80	YIL144W	TCO89	Q08921	799 aa		3.32	□□□□□ -1.88
NDC80	YIL144W	PFA4	Q12006	378 aa		3.32	□□□□□ -1.88
NDC80	YIL144W	RIM20	Q12033	661 aa		3.32	□□□□□ -1.88
NDC80	YIL144W	AFI1	Q99222	893 aa		3.32	□□□□□ -1.88
NDC80	YIL144W	BI2	P03873	423 aa		3.31	□□□□□ -1.88
NDC80	YIL144W	YMR085W	P0CF18	432 aa		3.31	□□□□□ -1.88
NDC80	YIL144W	RPL1A	P0CX43	217 aa	Known RBP	3.31	□□□□□ -1.88
NDC80	YIL144W	RPL1B	P0CX44	217 aa	Known RBP	3.31	□□□□□ -1.88
NDC80	YIL144W	YCR006C	P25350	157 aa		3.31	□□□□□ -1.88
NDC80	YIL144W	SMY1	P32364	656 aa	Known RBP	3.31	□□□□□ -1.88
NDC80	YIL144W	LHS1	P36016	881 aa		3.31	□□□□□ -1.88
NDC80	YIL144W	SNU114	P36048	1008 aa	Known RBP	3.31	□□□□□ -1.88
NDC80	YIL144W	PXL1	P36166	706 aa		3.31	□□□□□ -1.88
NDC80	YIL144W	CST26	P38226	397 aa		3.31	□□□□□ -1.88
NDC80	YIL144W	PEX18	P38855	283 aa		3.31	□□□□□ -1.88
NDC80	YIL144W	DPB11	P47027	764 aa	Predicted RBP	3.31	□□□□□ -1.88
NDC80	YIL144W	ALT2	P52892	507 aa		3.31	□□□□□ -1.88
NDC80	YIL144W	YTP1	P53584	459 aa		3.31	□□□□□ -1.88
NDC80	YIL144W	MAK10	Q02197	733 aa		3.31	□□□□□ -1.88
NDC80	YIL144W	YML037C	Q03703	340 aa		3.31	□□□□□ -1.88
NDC80	YIL144W	ECM18	Q04623	453 aa		3.31	□□□□□ -1.88
NDC80	YIL144W	PIG1	Q06216	648 aa		3.31	□□□□□ -1.88
NDC80	YIL144W	TPO3	Q06451	622 aa		3.31	□□□□□ -1.88
NDC80	YIL144W	BUD7	Q08754	746 aa		3.31	□□□□□ -1.88
NDC80	YIL144W	INP53	Q12271	1107 aa		3.31	□□□□□ -1.88
NDC80	YIL144W	SEC39	Q12745	709 aa		3.31	□□□□□ -1.88
NDC80	YIL144W	PRE8	P23639	250 aa		3.31	□□□□□ -1.88
NDC80	YIL144W	CDC15	P27636	974 aa		3.31	□□□□□ -1.88
NDC80	YIL144W	MRP4	P32902	394 aa		3.31	□□□□□ -1.88

Retrieved 100 of 5,963 RNA–protein pairs in 10.2 ms