RNA–Protein interactions for RNA: YHR040W

BCD1, Essential protein required for the accumulation of box C/D snoRNA, yeastyeast

Gene BCD1, Length 1,101 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BCD1YHR040W CLB4P24871 460 aa3.47□□□□□ -1.85
BCD1YHR040W EMC1P25574 760 aa3.47□□□□□ -1.85
BCD1YHR040W LRE1P25579 583 aaKnown RBP3.47□□□□□ -1.85
BCD1YHR040W URA10P30402 227 aa3.47□□□□□ -1.85
BCD1YHR040W TPS2P31688 896 aaKnown RBP3.47□□□□□ -1.85
BCD1YHR040W PDB1P32473 366 aaKnown RBP3.47□□□□□ -1.85
BCD1YHR040W BCS1P32839 456 aa3.47□□□□□ -1.85
BCD1YHR040W KES1P35844 434 aaKnown RBP3.47□□□□□ -1.85
BCD1YHR040W SMF2P38778 549 aa3.47□□□□□ -1.85
BCD1YHR040W AIM18P38884 321 aa3.47□□□□□ -1.85
BCD1YHR040W FLC2P39719 783 aa3.47□□□□□ -1.85
BCD1YHR040W FRT2P39734 528 aa3.47□□□□□ -1.85
BCD1YHR040W DSE1P40077 573 aa3.47□□□□□ -1.85
BCD1YHR040W PSF2P40359 213 aa3.47□□□□□ -1.85
BCD1YHR040W MAD2P40958 196 aa3.47□□□□□ -1.85
BCD1YHR040W CTR1P49573 406 aa3.47□□□□□ -1.85
BCD1YHR040W RAI1P53063 387 aaKnown RBP3.47□□□□□ -1.85
BCD1YHR040W YPR003CP53394 754 aa3.47□□□□□ -1.85
BCD1YHR040W DAK1P54838 584 aaKnown RBP3.47□□□□□ -1.85
BCD1YHR040W YDR132CQ03900 495 aa3.47□□□□□ -1.85
BCD1YHR040W YAP6Q03935 383 aa3.47□□□□□ -1.85
BCD1YHR040W GRX8Q05926 109 aa3.47□□□□□ -1.85
BCD1YHR040W CDA1Q06702 301 aa3.47□□□□□ -1.85
BCD1YHR040W AAD4Q07747 329 aa3.47□□□□□ -1.85
BCD1YHR040W CUE5Q08412 411 aaKnown RBP3.47□□□□□ -1.85
BCD1YHR040W YLR053CQ12026 108 aa3.47□□□□□ -1.85
BCD1YHR040W HAL9Q12180 1030 aa3.47□□□□□ -1.85
BCD1YHR040W ATG11Q12527 1178 aa3.47□□□□□ -1.85
BCD1YHR040W CTF3Q12748 733 aa3.47□□□□□ -1.85
BCD1YHR040W YPT6Q99260 215 aa3.47□□□□□ -1.85
BCD1YHR040W GSC2P40989 1895 aa3.47□□□□□ -1.85
BCD1YHR040W PAB1P04147 577 aaKnown RBP RIP-Chip data3.46□□□□□ -1.86not detected
BCD1YHR040W CHS1P08004 1131 aa3.46□□□□□ -1.86
BCD1YHR040W SPE1P08432 466 aa3.46□□□□□ -1.86
BCD1YHR040W SSC1P0CS90 654 aaKnown RBP3.46□□□□□ -1.86
BCD1YHR040W RED1P14291 827 aa3.46□□□□□ -1.86
BCD1YHR040W PDX1P16451 410 aa3.46□□□□□ -1.86
BCD1YHR040W CLB3P24870 427 aa3.46□□□□□ -1.86
BCD1YHR040W SGF29P25554 259 aa3.46□□□□□ -1.86
BCD1YHR040W AAD3P25612 363 aa3.46□□□□□ -1.86
BCD1YHR040W FUB1P25659 250 aa3.46□□□□□ -1.86
BCD1YHR040W CDC20P26309 610 aa3.46□□□□□ -1.86
BCD1YHR040W HRR25P29295 494 aaKnown RBP3.46□□□□□ -1.86
BCD1YHR040W NDI1P32340 513 aa3.46□□□□□ -1.86
BCD1YHR040W MVD1P32377 396 aaKnown RBP3.46□□□□□ -1.86
BCD1YHR040W FRE1P32791 686 aa3.46□□□□□ -1.86
BCD1YHR040W THI80P35202 319 aa3.46□□□□□ -1.86
BCD1YHR040W ETR1P38071 380 aa3.46□□□□□ -1.86
BCD1YHR040W YBR138CP38277 524 aa3.46□□□□□ -1.86
BCD1YHR040W IFA38P38286 347 aa3.46□□□□□ -1.86
BCD1YHR040W YBR225WP38321 900 aa3.46□□□□□ -1.86
BCD1YHR040W KSP1P38691 1029 aaKnown RBP3.46□□□□□ -1.86
BCD1YHR040W OTU2P38747 307 aaKnown RBP3.46□□□□□ -1.86
BCD1YHR040W PRM9P39551 298 aa3.46□□□□□ -1.86
BCD1YHR040W YER186CP40101 306 aa3.46□□□□□ -1.86
BCD1YHR040W JEM1P40358 645 aa3.46□□□□□ -1.86
BCD1YHR040W PRM2P40534 656 aa3.46□□□□□ -1.86
BCD1YHR040W ARF3P40994 183 aaRIP-Chip data3.46□□□□□ -1.86not detected
BCD1YHR040W CCT7P42943 550 aaKnown RBP3.46□□□□□ -1.86
BCD1YHR040W MET12P46151 657 aa3.46□□□□□ -1.86
BCD1YHR040W SET2P46995 733 aaKnown RBP3.46□□□□□ -1.86
BCD1YHR040W TMA22P47089 198 aaPredicted RBP3.46□□□□□ -1.86
BCD1YHR040W TEL2P53038 688 aa3.46□□□□□ -1.86
BCD1YHR040W IMA1P53051 589 aa3.46□□□□□ -1.86
BCD1YHR040W MNT2P53059 558 aa3.46□□□□□ -1.86
BCD1YHR040W NNF2P53253 936 aa3.46□□□□□ -1.86
BCD1YHR040W IST1P53843 298 aaPredicted RBP3.46□□□□□ -1.86
BCD1YHR040W YNL144CP53907 740 aa3.46□□□□□ -1.86
BCD1YHR040W RLI1Q03195 608 aaKnown RBP3.46□□□□□ -1.86
BCD1YHR040W YMR210WQ03649 449 aa3.46□□□□□ -1.86
BCD1YHR040W MFB1Q04922 465 aa3.46□□□□□ -1.86
BCD1YHR040W ADE13Q05911 482 aaKnown RBP3.46□□□□□ -1.86
BCD1YHR040W UTP21Q06078 939 aaPredicted RBP3.46□□□□□ -1.86
BCD1YHR040W PSR1Q07800 427 aa3.46□□□□□ -1.86
BCD1YHR040W NOP12Q08208 459 aaKnown RBP3.46□□□□□ -1.86
BCD1YHR040W NRT1Q08485 598 aa3.46□□□□□ -1.86
BCD1YHR040W DIN7Q12086 430 aa3.46□□□□□ -1.86
BCD1YHR040W RTK1Q12100 620 aaPredicted RBP3.46□□□□□ -1.86
BCD1YHR040W EMP46Q12396 444 aa3.46□□□□□ -1.86
BCD1YHR040W ZPS1Q12512 249 aa3.46□□□□□ -1.86
BCD1YHR040W EFG1Q3E705 233 aaKnown RBP3.46□□□□□ -1.86
BCD1YHR040W IZH4Q99393 312 aa3.46□□□□□ -1.86
BCD1YHR040W GCN4P03069 281 aa3.45□□□□□ -1.86
BCD1YHR040W GAL80P04387 435 aa3.45□□□□□ -1.86
BCD1YHR040W RAD10P06838 210 aa3.45□□□□□ -1.86
BCD1YHR040W RAD3P06839 778 aa3.45□□□□□ -1.86
BCD1YHR040W HIS5P07172 385 aa3.45□□□□□ -1.86
BCD1YHR040W HEM1P09950 548 aaPredicted RBP3.45□□□□□ -1.86
BCD1YHR040W RPL4AP10664 362 aaKnown RBP3.45□□□□□ -1.86
BCD1YHR040W CKA1P15790 372 aa3.45□□□□□ -1.86
BCD1YHR040W EXO70P19658 623 aa3.45□□□□□ -1.86
BCD1YHR040W BET2P20133 325 aa3.45□□□□□ -1.86
BCD1YHR040W AMD2P22580 549 aa3.45□□□□□ -1.86
BCD1YHR040W SAT4P25333 603 aaKnown RBP3.45□□□□□ -1.86
BCD1YHR040W IMG2P25642 146 aaPredicted RBP3.45□□□□□ -1.86
BCD1YHR040W BUD14P27637 709 aa3.45□□□□□ -1.86
BCD1YHR040W SIN4P32259 974 aa3.45□□□□□ -1.86
BCD1YHR040W CBF5P33322 483 aaKnown RBP RIP-Chip data3.45□□□□□ -1.86not detected
BCD1YHR040W SWH1P35845 1188 aa3.45□□□□□ -1.86
BCD1YHR040W TEF4P36008 412 aaKnown RBP3.45□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 44.9 ms