RNA–Protein interactions for RNA: YDR432W

NPL3, Transcript of RNA-binding protein, yeast

Gene NPL3, Length 1,245 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NPL3	YDR432W	MRPL25	P23369	157 aa		12.32	□□□□□ -0.44
NPL3	YDR432W	ILV6	P25605	309 aa	Known RBP	12.32	□□□□□ -0.44
NPL3	YDR432W	EFM1	P38732	585 aa		12.32	□□□□□ -0.44
NPL3	YDR432W	BOL2	P53082	120 aa		12.32	□□□□□ -0.44
NPL3	YDR432W	YGR250C	P53316	781 aa	Known RBP	12.32	□□□□□ -0.44
NPL3	YDR432W	HST2	P53686	357 aa		12.32	□□□□□ -0.44
NPL3	YDR432W	YET3	Q07451	203 aa		12.32	□□□□□ -0.44
NPL3	YDR432W	ATG29	Q12092	213 aa		12.32	□□□□□ -0.44
NPL3	YDR432W	YLR111W	Q12528	110 aa		12.32	□□□□□ -0.44
NPL3	YDR432W	PNO1	Q99216	274 aa	Known RBP	12.32	□□□□□ -0.44
NPL3	YDR432W	ILV2	P07342	687 aa	Known RBP	12.31	□□□□□ -0.44
NPL3	YDR432W	SIN4	P32259	974 aa		12.31	□□□□□ -0.44
NPL3	YDR432W	ETR1	P38071	380 aa		12.31	□□□□□ -0.44
NPL3	YDR432W	ELP2	P42935	788 aa		12.31	□□□□□ -0.44
NPL3	YDR432W	YGR015C	P53208	328 aa		12.31	□□□□□ -0.44
NPL3	YDR432W	ADE12	P80210	433 aa	Known RBP	12.31	□□□□□ -0.44
NPL3	YDR432W	SLT2	Q00772	484 aa		12.31	□□□□□ -0.44
NPL3	YDR432W	AAT1	Q01802	451 aa		12.31	□□□□□ -0.44
NPL3	YDR432W	BUD22	Q04347	519 aa	Known RBP	12.31	□□□□□ -0.44
NPL3	YDR432W	UTP13	Q05946	817 aa	Known RBP	12.31	□□□□□ -0.44
NPL3	YDR432W	GYP1	Q08484	637 aa		12.31	□□□□□ -0.44
NPL3	YDR432W	UPC2	Q12151	913 aa		12.31	□□□□□ -0.44
NPL3	YDR432W	BRR1	Q99177	341 aa	Predicted RBP	12.31	□□□□□ -0.44
NPL3	YDR432W	YBR056W-A	I2HB52	66 aa		12.3	□□□□□ -0.44
NPL3	YDR432W	SEC53	P07283	254 aa	Known RBP	12.3	□□□□□ -0.44
NPL3	YDR432W	YKL100C	P34248	587 aa		12.3	□□□□□ -0.44
NPL3	YDR432W	SOL2	P37262	315 aa		12.3	□□□□□ -0.44
NPL3	YDR432W	YIL086C	P40503	102 aa		12.3	□□□□□ -0.44
NPL3	YDR432W	YJR149W	P47177	404 aa		12.3	□□□□□ -0.44
NPL3	YDR432W	BCH1	Q05029	724 aa		12.3	□□□□□ -0.44
NPL3	YDR432W	YMR034C	Q05131	434 aa	Predicted RBP	12.3	□□□□□ -0.44
NPL3	YDR432W	YOR114W	Q12219	294 aa		12.3	□□□□□ -0.44
NPL3	YDR432W	HSP42	Q12329	375 aa		12.3	□□□□□ -0.44
NPL3	YDR432W	PST1	Q12355	444 aa		12.3	□□□□□ -0.44
NPL3	YDR432W	TRX2	P22803	104 aa	Known RBP	12.29	□□□□□ -0.44
NPL3	YDR432W	YCK2	P23292	546 aa	Known RBP	12.29	□□□□□ -0.44
NPL3	YDR432W	GCD11	P32481	527 aa	Known RBP	12.29	□□□□□ -0.44
NPL3	YDR432W	OAF3	P36023	863 aa		12.29	□□□□□ -0.44
NPL3	YDR432W	YRO2	P38079	344 aa		12.29	□□□□□ -0.44
NPL3	YDR432W	SPC97	P38863	823 aa		12.29	□□□□□ -0.44
NPL3	YDR432W	NDE1	P40215	560 aa		12.29	□□□□□ -0.44
NPL3	YDR432W	TFG1	P41895	735 aa	Predicted RBP	12.29	□□□□□ -0.44
NPL3	YDR432W	ERG26	P53199	349 aa	Known RBP	12.29	□□□□□ -0.44
NPL3	YDR432W	BUD32	P53323	261 aa		12.29	□□□□□ -0.44
NPL3	YDR432W	ELP4	Q02884	456 aa	Known RBP	12.29	□□□□□ -0.44
NPL3	YDR432W	PEX25	Q02969	394 aa		12.29	□□□□□ -0.44
NPL3	YDR432W	YOR223W	Q12015	292 aa		12.29	□□□□□ -0.44
NPL3	YDR432W	RUD3	Q12234	484 aa	Known RBP	12.29	□□□□□ -0.44
NPL3	YDR432W	CDC21	P06785	304 aa		12.28	□□□□□ -0.44
NPL3	YDR432W	SSC1	P0CS90	654 aa	Known RBP	12.28	□□□□□ -0.44
NPL3	YDR432W	VAC17	P25591	423 aa		12.28	□□□□□ -0.44
NPL3	YDR432W	PRO1	P32264	428 aa		12.28	□□□□□ -0.44
NPL3	YDR432W	SRB5	P32585	307 aa		12.28	□□□□□ -0.44
NPL3	YDR432W	SFA1	P32771	386 aa		12.28	□□□□□ -0.44
NPL3	YDR432W	CYM1	P32898	989 aa		12.28	□□□□□ -0.44
NPL3	YDR432W	EHT1	P38295	451 aa		12.28	□□□□□ -0.44
NPL3	YDR432W	FTH1	P38310	465 aa		12.28	□□□□□ -0.44
NPL3	YDR432W	INM1	P38710	295 aa		12.28	□□□□□ -0.44
NPL3	YDR432W	DHH1	P39517	506 aa	Known RBP	12.28	□□□□□ -0.44
NPL3	YDR432W	CLD1	P53264	445 aa		12.28	□□□□□ -0.44
NPL3	YDR432W	NHP10	Q03435	203 aa		12.28	□□□□□ -0.44
NPL3	YDR432W	URA4	P20051	364 aa		12.27	□□□□□ -0.45
NPL3	YDR432W	MUP3	P38734	546 aa		12.27	□□□□□ -0.45
NPL3	YDR432W	AXL2	P38928	823 aa		12.27	□□□□□ -0.45
NPL3	YDR432W	RGA1	P39083	1007 aa		12.27	□□□□□ -0.45
NPL3	YDR432W	NPT1	P39683	429 aa	Known RBP	12.27	□□□□□ -0.45
NPL3	YDR432W	GCD14	P46959	383 aa	Predicted RBP	12.27	□□□□□ -0.45
NPL3	YDR432W	TRM9	P49957	279 aa		12.27	□□□□□ -0.45
NPL3	YDR432W	MDM34	P53083	459 aa		12.27	□□□□□ -0.45
NPL3	YDR432W	HAL9	Q12180	1030 aa		12.27	□□□□□ -0.45
NPL3	YDR432W	IPP1	P00817	287 aa	Known RBP	12.26	□□□□□ -0.45
NPL3	YDR432W	RPL17A	P05740	184 aa	Known RBP	12.26	□□□□□ -0.45
NPL3	YDR432W	RPS4A	P0CX35	261 aa	Known RBP	12.26	□□□□□ -0.45
NPL3	YDR432W	RPS4B	P0CX36	261 aa	Known RBP	12.26	□□□□□ -0.45
NPL3	YDR432W	KIN2	P13186	1147 aa	Known RBP	12.26	□□□□□ -0.45
NPL3	YDR432W	SEC14	P24280	304 aa	Known RBP	12.26	□□□□□ -0.45
NPL3	YDR432W	RPL17B	P46990	184 aa	Known RBP	12.26	□□□□□ -0.45
NPL3	YDR432W	FHN1	P53279	174 aa		12.26	□□□□□ -0.45
NPL3	YDR432W	BIO4	P53630	237 aa		12.26	□□□□□ -0.45
NPL3	YDR432W	SED5	Q01590	340 aa		12.26	□□□□□ -0.45
NPL3	YDR432W	SPO20	Q04359	397 aa		12.26	□□□□□ -0.45
NPL3	YDR432W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	12.26	□□□□□ -0.45	not detected
NPL3	YDR432W	RPB4	P20433	221 aa	Predicted RBP	12.25	□□□□□ -0.45
NPL3	YDR432W	AMD2	P22580	549 aa		12.25	□□□□□ -0.45
NPL3	YDR432W	YJR030C	P47101	745 aa		12.25	□□□□□ -0.45
NPL3	YDR432W	RNT1	Q02555	471 aa		12.25	□□□□□ -0.45
NPL3	YDR432W	GOT1	Q03554	138 aa		12.25	□□□□□ -0.45
NPL3	YDR432W	YLR177W	Q06251	628 aa		12.25	□□□□□ -0.45
NPL3	YDR432W	YPL066W	Q12194	479 aa		12.25	□□□□□ -0.45
NPL3	YDR432W	RRP42	Q12277	265 aa	Predicted RBP	12.25	□□□□□ -0.45
NPL3	YDR432W	HOM3	P10869	527 aa		12.24	□□□□□ -0.45
NPL3	YDR432W	YHR210C	P38893	341 aa		12.24	□□□□□ -0.45
NPL3	YDR432W	IBA57	P47158	497 aa		12.24	□□□□□ -0.45
NPL3	YDR432W	PAN2	P53010	1115 aa	Predicted RBP	12.24	□□□□□ -0.45
NPL3	YDR432W	CRN1	Q06440	651 aa		12.24	□□□□□ -0.45
NPL3	YDR432W	GIC2	Q06648	383 aa		12.24	□□□□□ -0.45
NPL3	YDR432W	UBX3	Q12229	455 aa		12.24	□□□□□ -0.45
NPL3	YDR432W	SLP1	Q12232	587 aa		12.24	□□□□□ -0.45
NPL3	YDR432W	STE3	P06783	470 aa		12.23	□□□□□ -0.45
NPL3	YDR432W	ADE1	P27616	306 aa		12.23	□□□□□ -0.45

Retrieved 100 of 5,963 RNA–protein pairs in 18.6 ms