RNA–Protein interactions for RNA: YDR243C

PRP28, Transcript of RNA helicase in the DEAD-box family, yeastyeast

Gene PRP28, Length 1,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP28YDR243C SCS7Q03529 384 aa4.42□□□□□ -1.7
PRP28YDR243C FMN1Q03778 218 aa4.42□□□□□ -1.7
PRP28YDR243C SEG1Q04279 960 aa4.42□□□□□ -1.7
PRP28YDR243C FAR10Q06001 478 aa4.42□□□□□ -1.7
PRP28YDR243C YLR407WQ06070 228 aa4.42□□□□□ -1.7
PRP28YDR243C ECM7Q06200 448 aa4.42□□□□□ -1.7
PRP28YDR243C CDA1Q06702 301 aa4.42□□□□□ -1.7
PRP28YDR243C HER1Q12276 1246 aa4.42□□□□□ -1.7
PRP28YDR243C GLO4Q12320 285 aa4.42□□□□□ -1.7
PRP28YDR243C RRI2Q12348 645 aa4.42□□□□□ -1.7
PRP28YDR243C TUB2P02557 457 aaKnown RBP4.42□□□□□ -1.7
PRP28YDR243C ADE5,7P07244 802 aaKnown RBP4.42□□□□□ -1.7
PRP28YDR243C NFT1P0CE68 1218 aa4.42□□□□□ -1.7
PRP28YDR243C MATALPHA1P0CY06 175 aa4.42□□□□□ -1.7
PRP28YDR243C HMLALPHA1P0CY07 175 aa4.42□□□□□ -1.7
PRP28YDR243C PET54P10834 293 aa4.42□□□□□ -1.7
PRP28YDR243C AAC3P18238 307 aa4.42□□□□□ -1.7
PRP28YDR243C SYP1P25623 870 aaKnown RBP4.42□□□□□ -1.7
PRP28YDR243C MEI5P32489 222 aa4.42□□□□□ -1.7
PRP28YDR243C SUR1P33300 382 aa4.42□□□□□ -1.7
PRP28YDR243C GDH2P33327 1092 aaKnown RBP4.42□□□□□ -1.7
PRP28YDR243C PDX3P38075 228 aaKnown RBP4.42□□□□□ -1.7
PRP28YDR243C YBR285WP38354 144 aa4.42□□□□□ -1.7
PRP28YDR243C EXO1P39875 702 aa4.42□□□□□ -1.7
PRP28YDR243C YER010CP40011 234 aa4.42□□□□□ -1.7
PRP28YDR243C DSE1P40077 573 aa4.42□□□□□ -1.7
PRP28YDR243C VFA1P40080 203 aa4.42□□□□□ -1.7
PRP28YDR243C ALG8P40351 577 aa4.42□□□□□ -1.7
PRP28YDR243C LOC1P43586 204 aaPredicted RBP4.42□□□□□ -1.7
PRP28YDR243C CCC1P47818 322 aa4.42□□□□□ -1.7
PRP28YDR243C HSH155P49955 971 aaKnown RBP4.42□□□□□ -1.7
PRP28YDR243C ARO8P53090 500 aaKnown RBP4.42□□□□□ -1.7
PRP28YDR243C YGR026WP53217 278 aa4.42□□□□□ -1.7
PRP28YDR243C IMO32P53219 342 aa4.42□□□□□ -1.7
PRP28YDR243C YGR122WP53272 402 aa4.42□□□□□ -1.7
PRP28YDR243C SAM50P53969 484 aa4.42□□□□□ -1.7
PRP28YDR243C YMD8Q03697 442 aa4.42□□□□□ -1.7
PRP28YDR243C ENT5Q03769 411 aaKnown RBP4.42□□□□□ -1.7
PRP28YDR243C PAL1Q05518 499 aaKnown RBP4.42□□□□□ -1.7
PRP28YDR243C ECI1Q05871 280 aa4.42□□□□□ -1.7
PRP28YDR243C ECM38Q05902 660 aaPredicted RBP4.42□□□□□ -1.7
PRP28YDR243C IWR1Q07532 353 aaPredicted RBP4.42□□□□□ -1.7
PRP28YDR243C ALE1Q08548 619 aa4.42□□□□□ -1.7
PRP28YDR243C YPL216WQ08964 1102 aa4.42□□□□□ -1.7
PRP28YDR243C YPR063CQ12160 140 aa4.42□□□□□ -1.7
PRP28YDR243C GIS3Q12418 502 aa4.42□□□□□ -1.7
PRP28YDR243C ZRT2Q12436 422 aa4.42□□□□□ -1.7
PRP28YDR243C PPR1P07272 904 aaPredicted RBP4.41□□□□□ -1.7
PRP28YDR243C MET2P08465 486 aa4.41□□□□□ -1.7
PRP28YDR243C WHI2P12611 486 aa4.41□□□□□ -1.7
PRP28YDR243C TOP3P13099 656 aa4.41□□□□□ -1.7
PRP28YDR243C GRX2P17695 143 aaKnown RBP4.41□□□□□ -1.7
PRP28YDR243C SAR1P20606 190 aaKnown RBP4.41□□□□□ -1.7
PRP28YDR243C GIT1P25346 518 aa4.41□□□□□ -1.7
PRP28YDR243C NDC1P32500 655 aa4.41□□□□□ -1.7
PRP28YDR243C RPD3P32561 433 aa4.41□□□□□ -1.7
PRP28YDR243C SSE2P32590 693 aaKnown RBP4.41□□□□□ -1.7
PRP28YDR243C YKL069WP36088 180 aa4.41□□□□□ -1.7
PRP28YDR243C LDH1P38139 375 aa4.41□□□□□ -1.7
PRP28YDR243C SIF2P38262 535 aa4.41□□□□□ -1.7
PRP28YDR243C YBP1P38315 674 aa4.41□□□□□ -1.7
PRP28YDR243C SSH1P38353 490 aaKnown RBP4.41□□□□□ -1.7
PRP28YDR243C APM2P38700 605 aa4.41□□□□□ -1.7
PRP28YDR243C LEU5P38702 357 aa4.41□□□□□ -1.7
PRP28YDR243C TPA1P40032 644 aaKnown RBP4.41□□□□□ -1.7
PRP28YDR243C MAM33P40513 266 aa4.41□□□□□ -1.7
PRP28YDR243C IMA5P40884 581 aa4.41□□□□□ -1.7
PRP28YDR243C MRPS18P42847 217 aa4.41□□□□□ -1.7
PRP28YDR243C ALR2P43553 858 aa4.41□□□□□ -1.7
PRP28YDR243C DLD2P46681 530 aaKnown RBP4.41□□□□□ -1.7
PRP28YDR243C ASE1P50275 885 aa4.41□□□□□ -1.7
PRP28YDR243C PYK2P52489 506 aaKnown RBP4.41□□□□□ -1.7
PRP28YDR243C PEX8P53248 589 aa4.41□□□□□ -1.7
PRP28YDR243C FOL1P53848 824 aa4.41□□□□□ -1.7
PRP28YDR243C CBK1P53894 756 aa4.41□□□□□ -1.7
PRP28YDR243C RPL34AP87262 121 aaPredicted RBP4.41□□□□□ -1.7
PRP28YDR243C YPL068CQ02749 293 aa4.41□□□□□ -1.7
PRP28YDR243C CWC27Q02770 301 aa4.41□□□□□ -1.7
PRP28YDR243C YML131WQ03102 365 aa4.41□□□□□ -1.7
PRP28YDR243C BSC2Q05611 235 aa4.41□□□□□ -1.7
PRP28YDR243C TDA6Q06466 467 aa4.41□□□□□ -1.7
PRP28YDR243C MRL1Q06815 381 aa4.41□□□□□ -1.7
PRP28YDR243C HBT1Q07653 1046 aaKnown RBP4.41□□□□□ -1.7
PRP28YDR243C YNG1Q08465 219 aa4.41□□□□□ -1.7
PRP28YDR243C FRE3Q08905 711 aa4.41□□□□□ -1.7
PRP28YDR243C MLH3Q12083 715 aa4.41□□□□□ -1.7
PRP28YDR243C DIN7Q12086 430 aa4.41□□□□□ -1.7
PRP28YDR243C RPN5Q12250 445 aaKnown RBP4.41□□□□□ -1.7
PRP28YDR243C ATP14Q12349 124 aa4.41□□□□□ -1.7
PRP28YDR243C ADR1P07248 1323 aa4.41□□□□□ -1.7
PRP28YDR243C VMR1P38735 1592 aa4.41□□□□□ -1.7
PRP28YDR243C SPT3P06844 337 aa4.4□□□□□ -1.7
PRP28YDR243C RPL8AP17076 256 aaKnown RBP4.4□□□□□ -1.7
PRP28YDR243C COX11P19516 300 aaKnown RBP4.4□□□□□ -1.7
PRP28YDR243C MGR1P25573 417 aa4.4□□□□□ -1.7
PRP28YDR243C PTC6P25646 442 aa4.4□□□□□ -1.7
PRP28YDR243C CTS1P29029 562 aa4.4□□□□□ -1.7
PRP28YDR243C RPL8BP29453 256 aaKnown RBP4.4□□□□□ -1.7
PRP28YDR243C POL12P38121 705 aaPredicted RBP4.4□□□□□ -1.7
PRP28YDR243C NCL1P38205 684 aaKnown RBP4.4□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 43.7 ms