RNA–Protein interactions for RNA: YDL164C

CDC9, Transcript of DNA ligase found in the nucleus and mitochondria, yeastyeast

Gene CDC9, Length 2,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC9YDL164C MCX1P38323 520 aaPredicted RBP4.29□□□□□ -1.72
CDC9YDL164C FMO1P38866 432 aa4.29□□□□□ -1.72
CDC9YDL164C GIP4P39732 760 aa4.29□□□□□ -1.72
CDC9YDL164C VHS2P40463 436 aa4.29□□□□□ -1.72
CDC9YDL164C ASG1P40467 964 aa4.29□□□□□ -1.72
CDC9YDL164C CIN1P40987 1014 aa4.29□□□□□ -1.72
CDC9YDL164C BAP3P41815 604 aa4.29□□□□□ -1.72
CDC9YDL164C YJL107CP42947 387 aa4.29□□□□□ -1.72
CDC9YDL164C NPA3P47122 385 aa4.29□□□□□ -1.72
CDC9YDL164C COQ6P53318 479 aa4.29□□□□□ -1.72
CDC9YDL164C SPC98P53540 846 aa4.29□□□□□ -1.72
CDC9YDL164C EFM6P53970 246 aa4.29□□□□□ -1.72
CDC9YDL164C CRN1Q06440 651 aa4.29□□□□□ -1.72
CDC9YDL164C GCD2P12754 651 aaPredicted RBP4.29□□□□□ -1.72
CDC9YDL164C RPB4P20433 221 aaPredicted RBP4.29□□□□□ -1.72
CDC9YDL164C DAL81P21657 970 aa4.29□□□□□ -1.72
CDC9YDL164C PUP3P25451 205 aaKnown RBP4.29□□□□□ -1.72
CDC9YDL164C NTH1P32356 751 aa4.29□□□□□ -1.72
CDC9YDL164C AIM26P32858 118 aa4.29□□□□□ -1.72
CDC9YDL164C AFG3P39925 761 aa4.29□□□□□ -1.72
CDC9YDL164C OPT1P40897 799 aa4.29□□□□□ -1.72
CDC9YDL164C IRC8P47046 822 aa4.29□□□□□ -1.72
CDC9YDL164C MSY1P48527 492 aa4.29□□□□□ -1.72
CDC9YDL164C YIP5P53108 310 aa4.29□□□□□ -1.72
CDC9YDL164C RTT102P53330 157 aa4.29□□□□□ -1.72
CDC9YDL164C YNL134CP53912 376 aaKnown RBP4.29□□□□□ -1.72
CDC9YDL164C SLG1P54867 378 aa4.29□□□□□ -1.72
CDC9YDL164C FIN1Q03898 291 aa4.29□□□□□ -1.72
CDC9YDL164C MRI1Q06489 411 aaKnown RBP4.29□□□□□ -1.72
CDC9YDL164C NDL1Q06568 189 aa4.29□□□□□ -1.72
CDC9YDL164C CRT10Q08226 957 aa4.29□□□□□ -1.72
CDC9YDL164C AIM41Q12032 185 aa4.29□□□□□ -1.72
CDC9YDL164C VPS34P22543 875 aa4.28□□□□□ -1.72
CDC9YDL164C MEK1P24719 497 aaPredicted RBP4.28□□□□□ -1.72
CDC9YDL164C COT1P32798 439 aa4.28□□□□□ -1.72
CDC9YDL164C HCS1P34243 683 aa4.28□□□□□ -1.72
CDC9YDL164C RPP1P38786 293 aa4.28□□□□□ -1.72
CDC9YDL164C YIR014WP40570 242 aa4.28□□□□□ -1.72
CDC9YDL164C FKH2P41813 862 aa4.28□□□□□ -1.72
CDC9YDL164C COS5P47187 383 aa4.28□□□□□ -1.72
CDC9YDL164C RRP46P53256 223 aaPredicted RBP4.28□□□□□ -1.72
CDC9YDL164C DBP6P53734 629 aaKnown RBP4.28□□□□□ -1.72
CDC9YDL164C OCA2P53949 197 aa4.28□□□□□ -1.72
CDC9YDL164C YAT1P80235 687 aa4.28□□□□□ -1.72
CDC9YDL164C SPO19Q03029 223 aa4.28□□□□□ -1.72
CDC9YDL164C ARR1Q06596 294 aa4.28□□□□□ -1.72
CDC9YDL164C ATG23Q06671 453 aa4.28□□□□□ -1.72
CDC9YDL164C COS7Q07788 383 aa4.28□□□□□ -1.72
CDC9YDL164C SMC5Q08204 1093 aa4.28□□□□□ -1.72
CDC9YDL164C CLN1P20437 546 aa4.28□□□□□ -1.72
CDC9YDL164C PRS1P32895 427 aaKnown RBP4.28□□□□□ -1.72
CDC9YDL164C YBR144CP34215 104 aa4.28□□□□□ -1.72
CDC9YDL164C SDH8P38345 138 aa4.28□□□□□ -1.72
CDC9YDL164C ARP1P38696 384 aa4.28□□□□□ -1.72
CDC9YDL164C IMD2P38697 523 aaKnown RBP4.28□□□□□ -1.72
CDC9YDL164C ETP1P38748 585 aaKnown RBP4.28□□□□□ -1.72
CDC9YDL164C MSS2P40990 351 aa4.28□□□□□ -1.72
CDC9YDL164C RPS10BP46784 105 aaKnown RBP4.28□□□□□ -1.72
CDC9YDL164C IDS2P46958 469 aa4.28□□□□□ -1.72
CDC9YDL164C DRN1P53255 507 aaKnown RBP4.28□□□□□ -1.72
CDC9YDL164C PDS5Q04264 1277 aa4.28□□□□□ -1.72
CDC9YDL164C YFH1Q07540 174 aa4.28□□□□□ -1.72
CDC9YDL164C FMP40Q08968 688 aaPredicted RBP4.28□□□□□ -1.72
CDC9YDL164C NCE102Q12207 173 aaRIP-Chip data4.28□□□□□ -1.72not detected
CDC9YDL164C LAS17Q12446 633 aa4.28□□□□□ -1.72
CDC9YDL164C YBR255C-AQ3E776 120 aa4.28□□□□□ -1.72
CDC9YDL164C ILV2P07342 687 aaKnown RBP4.27□□□□□ -1.73
CDC9YDL164C GAL3P13045 520 aa4.27□□□□□ -1.73
CDC9YDL164C SEC63P14906 663 aa4.27□□□□□ -1.73
CDC9YDL164C URA4P20051 364 aa4.27□□□□□ -1.73
CDC9YDL164C APA2P22108 325 aa4.27□□□□□ -1.73
CDC9YDL164C EMC1P25574 760 aa4.27□□□□□ -1.73
CDC9YDL164C KKQ8P36004 724 aa4.27□□□□□ -1.73
CDC9YDL164C NTR2P36118 322 aaPredicted RBP4.27□□□□□ -1.73
CDC9YDL164C GLG1P36143 616 aa4.27□□□□□ -1.73
CDC9YDL164C YHR177WP38867 453 aa4.27□□□□□ -1.73
CDC9YDL164C MMM1P41800 426 aa4.27□□□□□ -1.73
CDC9YDL164C CHA4P43634 648 aa4.27□□□□□ -1.73
CDC9YDL164C JJJ3P47138 172 aa4.27□□□□□ -1.73
CDC9YDL164C CTH1P47976 325 aa4.27□□□□□ -1.73
CDC9YDL164C YGR130CP53278 816 aa4.27□□□□□ -1.73
CDC9YDL164C YMR102CQ03177 834 aa4.27□□□□□ -1.73
CDC9YDL164C IZH3Q07959 543 aa4.27□□□□□ -1.73
CDC9YDL164C FRE5Q08908 694 aa4.27□□□□□ -1.73
CDC9YDL164C AFT2Q08957 416 aa4.27□□□□□ -1.73
CDC9YDL164C YDR061WQ12298 539 aa4.27□□□□□ -1.73
CDC9YDL164C SRV2P17555 526 aaKnown RBP4.26□□□□□ -1.73
CDC9YDL164C NDI1P32340 513 aa4.26□□□□□ -1.73
CDC9YDL164C GPI16P38875 610 aa4.26□□□□□ -1.73
CDC9YDL164C NMD5P46970 1048 aa4.26□□□□□ -1.73
CDC9YDL164C AIM22P47051 409 aa4.26□□□□□ -1.73
CDC9YDL164C ARI1P53111 347 aaKnown RBP4.26□□□□□ -1.73
CDC9YDL164C RMD9P53140 646 aaKnown RBP4.26□□□□□ -1.73
CDC9YDL164C VPS73P53142 486 aaKnown RBP4.26□□□□□ -1.73
CDC9YDL164C COP1P53622 1201 aaKnown RBP4.26□□□□□ -1.73
CDC9YDL164C KTR6P54070 446 aa4.26□□□□□ -1.73
CDC9YDL164C SKO1Q02100 647 aa4.26□□□□□ -1.73
CDC9YDL164C BUD22Q04347 519 aaKnown RBP4.26□□□□□ -1.73
CDC9YDL164C ERV41Q04651 352 aa4.26□□□□□ -1.73
CDC9YDL164C HPF1Q05164 967 aa4.26□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms