RNA–Protein interactions for RNA: YDL097C

RPN6, Transcript of Essential, non-ATPase regulatory subunit of the 26S proteasome lid, yeast

Gene RPN6, Length 1,305 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN6	YDL097C	RKM2	Q03942	479 aa		4.23	□□□□□ -1.73
RPN6	YDL097C	YLR297W	Q05899	129 aa		4.23	□□□□□ -1.73
RPN6	YDL097C	SWC7	Q06707	132 aa		4.23	□□□□□ -1.73
RPN6	YDL097C	PSK2	Q08217	1101 aa		4.23	□□□□□ -1.73
RPN6	YDL097C	IRC13	Q08630	104 aa		4.23	□□□□□ -1.73
RPN6	YDL097C	PGC1	Q08959	321 aa		4.23	□□□□□ -1.73
RPN6	YDL097C	MDM32	Q12171	622 aa		4.23	□□□□□ -1.73
RPN6	YDL097C	NCE102	Q12207	173 aa	RIP-Chip data	4.23	□□□□□ -1.73	not detected
RPN6	YDL097C	Q0297	Q9ZZV8	51 aa		4.23	□□□□□ -1.73
RPN6	YDL097C	CYC7	P00045	113 aa		4.22	□□□□□ -1.73
RPN6	YDL097C	GAL7	P08431	366 aa		4.22	□□□□□ -1.73
RPN6	YDL097C	YSR3	P23501	404 aa		4.22	□□□□□ -1.73
RPN6	YDL097C	CDC15	P27636	974 aa		4.22	□□□□□ -1.73
RPN6	YDL097C	PRO1	P32264	428 aa		4.22	□□□□□ -1.73
RPN6	YDL097C	SSH4	P32343	579 aa		4.22	□□□□□ -1.73
RPN6	YDL097C	UGP1	P32861	499 aa	Known RBP	4.22	□□□□□ -1.73
RPN6	YDL097C	SFC1	P33303	322 aa		4.22	□□□□□ -1.73
RPN6	YDL097C	MTR2	P34232	184 aa	Known RBP	4.22	□□□□□ -1.73
RPN6	YDL097C	EHT1	P38295	451 aa		4.22	□□□□□ -1.73
RPN6	YDL097C	OM14	P38325	134 aa		4.22	□□□□□ -1.73
RPN6	YDL097C	DBP8	P38719	431 aa		4.22	□□□□□ -1.73
RPN6	YDL097C	YDR089W	P38966	869 aa		4.22	□□□□□ -1.73
RPN6	YDL097C	VFA1	P40080	203 aa		4.22	□□□□□ -1.73
RPN6	YDL097C	TMA108	P40462	946 aa		4.22	□□□□□ -1.73
RPN6	YDL097C	TED1	P40533	473 aa		4.22	□□□□□ -1.73
RPN6	YDL097C	HNT2	P49775	206 aa		4.22	□□□□□ -1.73
RPN6	YDL097C	PAN2	P53010	1115 aa	Predicted RBP	4.22	□□□□□ -1.73
RPN6	YDL097C	SOK2	P53438	785 aa	Predicted RBP	4.22	□□□□□ -1.73
RPN6	YDL097C	FRE4	P53746	719 aa		4.22	□□□□□ -1.73
RPN6	YDL097C	ECM9	Q02202	377 aa		4.22	□□□□□ -1.73
RPN6	YDL097C	CTK1	Q03957	528 aa	Known RBP	4.22	□□□□□ -1.73
RPN6	YDL097C	YLR352W	Q06479	807 aa		4.22	□□□□□ -1.73
RPN6	YDL097C	NTG2	Q08214	380 aa		4.22	□□□□□ -1.73
RPN6	YDL097C	PGI1	P12709	554 aa	Known RBP	4.21	□□□□□ -1.73
RPN6	YDL097C	PUT4	P15380	627 aa		4.21	□□□□□ -1.73
RPN6	YDL097C	VPS34	P22543	875 aa		4.21	□□□□□ -1.73
RPN6	YDL097C	MAK32	P23060	363 aa		4.21	□□□□□ -1.73
RPN6	YDL097C	DCC1	P25559	380 aa		4.21	□□□□□ -1.73
RPN6	YDL097C	FAA1	P30624	700 aa	Known RBP	4.21	□□□□□ -1.73
RPN6	YDL097C	HIR1	P32479	840 aa		4.21	□□□□□ -1.73
RPN6	YDL097C	BET3	P36149	193 aa		4.21	□□□□□ -1.73
RPN6	YDL097C	ALG3	P38179	458 aa		4.21	□□□□□ -1.73
RPN6	YDL097C	YEN1	P40028	759 aa		4.21	□□□□□ -1.73
RPN6	YDL097C	MPH1	P40562	993 aa		4.21	□□□□□ -1.73
RPN6	YDL097C	ATG36	P46983	293 aa		4.21	□□□□□ -1.73
RPN6	YDL097C	YJL132W	P47014	750 aa		4.21	□□□□□ -1.73
RPN6	YDL097C	GCV1	P48015	400 aa		4.21	□□□□□ -1.73
RPN6	YDL097C	TIM13	P53299	105 aa		4.21	□□□□□ -1.73
RPN6	YDL097C	TIM10	P87108	93 aa		4.21	□□□□□ -1.73
RPN6	YDL097C	ARP9	Q05123	467 aa		4.21	□□□□□ -1.73
RPN6	YDL097C	BUD7	Q08754	746 aa		4.21	□□□□□ -1.73
RPN6	YDL097C	YOR376W	Q08900	122 aa		4.21	□□□□□ -1.73
RPN6	YDL097C	HAL9	Q12180	1030 aa		4.21	□□□□□ -1.73
RPN6	YDL097C	HSH49	Q99181	213 aa	Predicted RBP	4.21	□□□□□ -1.73
RPN6	YDL097C	CCW14	O13547	238 aa		4.21	□□□□□ -1.74
RPN6	YDL097C	MEF1	P25039	761 aa		4.21	□□□□□ -1.74
RPN6	YDL097C	BUB3	P26449	341 aa		4.21	□□□□□ -1.74
RPN6	YDL097C	YJU2	P28320	278 aa	Predicted RBP	4.21	□□□□□ -1.74
RPN6	YDL097C	SEC1	P30619	724 aa	Known RBP	4.21	□□□□□ -1.74
RPN6	YDL097C	PMT2	P31382	759 aa		4.21	□□□□□ -1.74
RPN6	YDL097C	RMA1	P36001	430 aa	Known RBP	4.21	□□□□□ -1.74
RPN6	YDL097C	REI1	P38344	393 aa	Predicted RBP	4.21	□□□□□ -1.74
RPN6	YDL097C	FAD1	P38913	306 aa		4.21	□□□□□ -1.74
RPN6	YDL097C	YJL206C	P39529	758 aa		4.21	□□□□□ -1.74
RPN6	YDL097C	BAP3	P41815	604 aa		4.21	□□□□□ -1.74
RPN6	YDL097C	FHN1	P53279	174 aa		4.21	□□□□□ -1.74
RPN6	YDL097C	ATG4	P53867	494 aa		4.21	□□□□□ -1.74
RPN6	YDL097C	CCE1	Q03702	353 aa		4.21	□□□□□ -1.74
RPN6	YDL097C	CYK3	Q07533	885 aa		4.21	□□□□□ -1.74
RPN6	YDL097C	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.74	not detected
RPN6	YDL097C	THI21	Q08975	551 aa		4.21	□□□□□ -1.74
RPN6	YDL097C	SLP1	Q12232	587 aa		4.21	□□□□□ -1.74
RPN6	YDL097C	YRM1	Q12340	786 aa		4.21	□□□□□ -1.74
RPN6	YDL097C	TY1A-NL1	Q12391	440 aa	Known RBP	4.21	□□□□□ -1.74
RPN6	YDL097C	OCA6	Q12454	224 aa		4.21	□□□□□ -1.74
RPN6	YDL097C	TY4B-P	A0A0B7P3V8	1104 aa		4.2	□□□□□ -1.74
RPN6	YDL097C	TYR1	P20049	452 aa		4.2	□□□□□ -1.74
RPN6	YDL097C	EMC1	P25574	760 aa		4.2	□□□□□ -1.74
RPN6	YDL097C	MLS1	P30952	554 aa		4.2	□□□□□ -1.74
RPN6	YDL097C	MEI5	P32489	222 aa		4.2	□□□□□ -1.74
RPN6	YDL097C	HBS1	P32769	611 aa	Known RBP	4.2	□□□□□ -1.74
RPN6	YDL097C	YAR028W	P39548	234 aa		4.2	□□□□□ -1.74
RPN6	YDL097C	GIM4	P40005	111 aa	Known RBP	4.2	□□□□□ -1.74
RPN6	YDL097C	IST3	P40565	148 aa	Predicted RBP	4.2	□□□□□ -1.74
RPN6	YDL097C	VMA13	P41807	478 aa	Known RBP	4.2	□□□□□ -1.74
RPN6	YDL097C	TCB2	P48231	1178 aa		4.2	□□□□□ -1.74
RPN6	YDL097C	UGO1	Q03327	502 aa		4.2	□□□□□ -1.74
RPN6	YDL097C	MTQ2	Q03920	221 aa	Predicted RBP	4.2	□□□□□ -1.74
RPN6	YDL097C	GSF2	Q04697	403 aa	Known RBP	4.2	□□□□□ -1.74
RPN6	YDL097C	YOR059C	Q08448	450 aa	Known RBP	4.2	□□□□□ -1.74
RPN6	YDL097C	RGT2	Q12300	763 aa		4.2	□□□□□ -1.74
RPN6	YDL097C	TY4A-H	Q6Q5P6	413 aa		4.2	□□□□□ -1.74
RPN6	YDL097C	HBN1	Q96VH4	193 aa		4.2	□□□□□ -1.74
RPN6	YDL097C	KAR1	P11927	433 aa		4.19	□□□□□ -1.74
RPN6	YDL097C	YPK1	P12688	680 aa	Known RBP	4.19	□□□□□ -1.74
RPN6	YDL097C	CMP2	P14747	604 aa		4.19	□□□□□ -1.74
RPN6	YDL097C	AMD1	P15274	810 aa	Known RBP	4.19	□□□□□ -1.74
RPN6	YDL097C	KAR3	P17119	729 aa		4.19	□□□□□ -1.74
RPN6	YDL097C	BMH1	P29311	267 aa	Known RBP	4.19	□□□□□ -1.74
RPN6	YDL097C	SPC110	P32380	944 aa		4.19	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 10.7 ms